Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g05360.1
CDS Infomation

gene=Cs3g05360
Sequence

ATGCAAAACAGCAATAATGATGAAGCTTCGGTGACAAAGACGACGGAGAAGCCGCCGCTG
CCGAAGCGATCGAAGACGATCTCCGACGACACTCACTTCCCAGGCCCACTTTTTCCCGCC
GTTCGCCGTACCGACAAGCCGTTCGATCTCCGCGTGTCCATTGACTCCGATGCTGCGGCG
TCGTCTTCTTCTTTGTCGTCGTCGTCGTTGTCGTCGAGTAATGGGTTTAACGAGAGAGAC
TGGATGTACCCGTCGTTCTTGGGCCCGCATATGGGTCGGAGGCGGATCAAAGTCAAACCC
AGTAAGCTTGAATTTAAAGGAAATGAGGAGAAGAAGAGGATTCAAGAGTTGGGTTCGAAG
AAAGAAGAGAAGGCGGTGGCGAGTTTAGCTGTGACTCAGTCGAACTCAGTGACTCAGACG
AGTTCAGTGACTCAGTTGAGTGGAAGGACTCGTGGGTTAAAGAGCTCCTTGATGACGTAT
TACATGCTAATAATCAACTGTATATTATGTGTATGTTATGCAATTCACTTGCGGGATAGA
GTTGAAAAACTTGAGGAAGAGAACAGTAGCCTTCGTAGATTTTGTAGCTATAAAAGTATT
GCTGGGAATAACGGCATTGATGTTTTGCATACTGACAATAACTCAGATTCCAATTTTGGT
AATGCTGATGGTAGAACCGTTGCTTTGTATAGTGTGATAGTCACACTTCTTATGCCATTT
GTATTGTATAAATATCTTGATTATCTTCCCCAAATAAAGAATTTCTCCAAAAGAACAAAG
AAAAACAAAGAGGAGGTTCCCTTGAAGAAGAGAGTTGCATATAGTGTGGATGTGTGTTTC
TCTGTTTATCCTTACGCAAAGCTGCTTGCACTACTCTTTGCGACTATATTTCTCATAATA
TTTGGTGGCTTGGCATTGTATGCGGTCAGTGACAGCAGCTTTGCTGAAGCTCTTTGGCTT
TCATGGACATTTGTAGCTGACTCGGGAAATCATGCTGATAGGGTTGGCACTGGGCCCAGG
ATTGTTTCTGTCTCTATTAGTTCAGGAGGCATGTTGATATTTGCAATGATGCTGGGACTA
GTCTCAGATGCCATCTCGGAGAAGGTAGATTCGCTGAGGAAAGGAAAGAGTGAAGTTATA
GAAAAGAATCACATACTGATTCTTGGCTGGAGTGACAAATTGGGTTCACTTCTGAAACAG
CTAGCAGTTGCAAACAAGAGCATTGGTGGAGGCGTTATTGTTGTACTAGCAGAAAGAGAC
AAGGAAGAAATGGAGATGGACATAGCAAAACTAGAGTTTGACTTTATGGGGACTTCTGTC
ATATGCAGGAGCGGCAGTCCTCTTATACTGGCTGACTTAAAGAAGGTATCAGTATCAAAG
GCACGTGCTATCATTGTATTAGCATCTGATGAAAATGCAGATCAGAGTGATGCACGTGCT
TTAAGGGTTGTGCTCAGTCTCACTGGAGTAAAAGAGGGTTTAAGGGGTCATGTTGTTGTG
GAAATGAGTGACCTTGACAATGAACCCCTGGTAAAGCTTGTTGGAGGAGAGCTCATTGAA
ACAGTTGTCGCACATGATGTGATTGGGCGGTTGATGATCCAATGTGCTCTGCAACCTGGC
CTTGCACAGATATGGGAAGACATATTGGGATTTGAGAATGCGGAATTTTACATTAAAAGG
TGGCCTCAATTGGATGATCTGCGTTTCGAAGAAGTGGTGATTTCATTTCCTGATGCGATT
CCCTGTGGAATTAAGGTTGCAGCTGAGGGTGGCAAGATAATTTTAAATCCGGATGATAAC
TATGTTCTGAAAGAGGGAGATGAAGTCCTTGTTATAGCTGAGGATGATGATACTTATGCG
CCTGGTCCCCTTCCAGAGGTATGCAAGCGGTCTTTCCTAAAAATACCTGACCCTCCAAAA
TATCCAGAGAAGATATTGTTCTGTGGCTGGCGCCGTGACATCGATGATATGATTATGGTG
CTAGAGGCATTCCTGGCTCCAGGTTCAGAATTGTGGATGCTTAATGAGGTACCTGAAAAA
GAAAGAGAGAAGAAACTTACTGATGGTGGTCTTGACATTTCTGGATTGATGAATATAAAA
CTCGTGCACCGTGAAGGAAATGCTGTTATTAGACGTCATTTAGAAAGTCTACCCTTGGAG
ACTTTTGATTCTATATTAATTCTTGCAGATGAGTCACTGGAAGACTCGATTGTGCATTCT
GACTCACGTTCTCTTGCCACCCTTCTCCTGATTCGTGACATACAGTCAAAACGTCTGCCT
TACAGAGATACAAAGCCTACTTCCTTACGGTTGTCCGGGTTCTCTCACAGCTCCTGGATT
CGTGAAATGCAGCAGGCTTCAGACAAATCTATTATTATCAGTGAAATCTTAGATTCCAGG
ACTAGGAACCTGGTATCAGTGTCCAGAATCAGCGATTATGTACTATCAAATGAACTTGTG
AGTATGGCACTGGCAATGGTGGCTGAAGACAAGCAAATCAATCGCGTTCTTGAGGAACTT
TTTGCTGAGGAGGGGAACGAAATGTGCATCAAACCGGCAGAGTTCTACTTATTTGACCAG
GAAGAGATTTCATTTTTTGATATAATGATTCGGGGTCGTCAAAGACAGGAAATTGTGATC
GGCTACCGGCTTGCTAATACCGAGCGCGCTATAATCAACCCTTCACAAAAATCAGAACCT
AGGAAATGGTCTCTTGATGATGTTTTTGTTGTCATTTCTTCAGGAGACTGA

Peptide Sequence

PEP ID

Cs3g05360.1
PEP Infomation
Sequence

MQNSNNDEASVTKTTEKPPLPKRSKTISDDTHFPGPLFPAVRRTDKPFDLRVSIDSDAAA
SSSSLSSSSLSSSNGFNERDWMYPSFLGPHMGRRRIKVKPSKLEFKGNEEKKRIQELGSK
KEEKAVASLAVTQSNSVTQTSSVTQLSGRTRGLKSSLMTYYMLIINCILCVCYAIHLRDR
VEKLEEENSSLRRFCSYKSIAGNNGIDVLHTDNNSDSNFGNADGRTVALYSVIVTLLMPF
VLYKYLDYLPQIKNFSKRTKKNKEEVPLKKRVAYSVDVCFSVYPYAKLLALLFATIFLII
FGGLALYAVSDSSFAEALWLSWTFVADSGNHADRVGTGPRIVSVSISSGGMLIFAMMLGL
VSDAISEKVDSLRKGKSEVIEKNHILILGWSDKLGSLLKQLAVANKSIGGGVIVVLAERD
KEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARA
LRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPG
LAQIWEDILGFENAEFYIKRWPQLDDLRFEEVVISFPDAIPCGIKVAAEGGKIILNPDDN
YVLKEGDEVLVIAEDDDTYAPGPLPEVCKRSFLKIPDPPKYPEKILFCGWRRDIDDMIMV
LEAFLAPGSELWMLNEVPEKEREKKLTDGGLDISGLMNIKLVHREGNAVIRRHLESLPLE
TFDSILILADESLEDSIVHSDSRSLATLLLIRDIQSKRLPYRDTKPTSLRLSGFSHSSWI
REMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEEL
FAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEP
RKWSLDDVFVVISSGD*

Transcript Sequence

Transcript ID

Cs3g05360.1
Transcript Infomation

gene=Cs3g05360 CDS=130-2880
Sequence

TCATCATGTATTTCTCAGAGAAACATCACTTCACTGTTAACTTCACGAAAGAAAAAATAA
TAATAATAGTGGTAATAATAAAAACTCTTTCAGATCTCTGCTTCATCAATTTTGTAAAAT
TTAGAGAAAATGCAAAACAGCAATAATGATGAAGCTTCGGTGACAAAGACGACGGAGAAG
CCGCCGCTGCCGAAGCGATCGAAGACGATCTCCGACGACACTCACTTCCCAGGCCCACTT
TTTCCCGCCGTTCGCCGTACCGACAAGCCGTTCGATCTCCGCGTGTCCATTGACTCCGAT
GCTGCGGCGTCGTCTTCTTCTTTGTCGTCGTCGTCGTTGTCGTCGAGTAATGGGTTTAAC
GAGAGAGACTGGATGTACCCGTCGTTCTTGGGCCCGCATATGGGTCGGAGGCGGATCAAA
GTCAAACCCAGTAAGCTTGAATTTAAAGGAAATGAGGAGAAGAAGAGGATTCAAGAGTTG
GGTTCGAAGAAAGAAGAGAAGGCGGTGGCGAGTTTAGCTGTGACTCAGTCGAACTCAGTG
ACTCAGACGAGTTCAGTGACTCAGTTGAGTGGAAGGACTCGTGGGTTAAAGAGCTCCTTG
ATGACGTATTACATGCTAATAATCAACTGTATATTATGTGTATGTTATGCAATTCACTTG
CGGGATAGAGTTGAAAAACTTGAGGAAGAGAACAGTAGCCTTCGTAGATTTTGTAGCTAT
AAAAGTATTGCTGGGAATAACGGCATTGATGTTTTGCATACTGACAATAACTCAGATTCC
AATTTTGGTAATGCTGATGGTAGAACCGTTGCTTTGTATAGTGTGATAGTCACACTTCTT
ATGCCATTTGTATTGTATAAATATCTTGATTATCTTCCCCAAATAAAGAATTTCTCCAAA
AGAACAAAGAAAAACAAAGAGGAGGTTCCCTTGAAGAAGAGAGTTGCATATAGTGTGGAT
GTGTGTTTCTCTGTTTATCCTTACGCAAAGCTGCTTGCACTACTCTTTGCGACTATATTT
CTCATAATATTTGGTGGCTTGGCATTGTATGCGGTCAGTGACAGCAGCTTTGCTGAAGCT
CTTTGGCTTTCATGGACATTTGTAGCTGACTCGGGAAATCATGCTGATAGGGTTGGCACT
GGGCCCAGGATTGTTTCTGTCTCTATTAGTTCAGGAGGCATGTTGATATTTGCAATGATG
CTGGGACTAGTCTCAGATGCCATCTCGGAGAAGGTAGATTCGCTGAGGAAAGGAAAGAGT
GAAGTTATAGAAAAGAATCACATACTGATTCTTGGCTGGAGTGACAAATTGGGTTCACTT
CTGAAACAGCTAGCAGTTGCAAACAAGAGCATTGGTGGAGGCGTTATTGTTGTACTAGCA
GAAAGAGACAAGGAAGAAATGGAGATGGACATAGCAAAACTAGAGTTTGACTTTATGGGG
ACTTCTGTCATATGCAGGAGCGGCAGTCCTCTTATACTGGCTGACTTAAAGAAGGTATCA
GTATCAAAGGCACGTGCTATCATTGTATTAGCATCTGATGAAAATGCAGATCAGAGTGAT
GCACGTGCTTTAAGGGTTGTGCTCAGTCTCACTGGAGTAAAAGAGGGTTTAAGGGGTCAT
GTTGTTGTGGAAATGAGTGACCTTGACAATGAACCCCTGGTAAAGCTTGTTGGAGGAGAG
CTCATTGAAACAGTTGTCGCACATGATGTGATTGGGCGGTTGATGATCCAATGTGCTCTG
CAACCTGGCCTTGCACAGATATGGGAAGACATATTGGGATTTGAGAATGCGGAATTTTAC
ATTAAAAGGTGGCCTCAATTGGATGATCTGCGTTTCGAAGAAGTGGTGATTTCATTTCCT
GATGCGATTCCCTGTGGAATTAAGGTTGCAGCTGAGGGTGGCAAGATAATTTTAAATCCG
GATGATAACTATGTTCTGAAAGAGGGAGATGAAGTCCTTGTTATAGCTGAGGATGATGAT
ACTTATGCGCCTGGTCCCCTTCCAGAGGTATGCAAGCGGTCTTTCCTAAAAATACCTGAC
CCTCCAAAATATCCAGAGAAGATATTGTTCTGTGGCTGGCGCCGTGACATCGATGATATG
ATTATGGTGCTAGAGGCATTCCTGGCTCCAGGTTCAGAATTGTGGATGCTTAATGAGGTA
CCTGAAAAAGAAAGAGAGAAGAAACTTACTGATGGTGGTCTTGACATTTCTGGATTGATG
AATATAAAACTCGTGCACCGTGAAGGAAATGCTGTTATTAGACGTCATTTAGAAAGTCTA
CCCTTGGAGACTTTTGATTCTATATTAATTCTTGCAGATGAGTCACTGGAAGACTCGATT
GTGCATTCTGACTCACGTTCTCTTGCCACCCTTCTCCTGATTCGTGACATACAGTCAAAA
CGTCTGCCTTACAGAGATACAAAGCCTACTTCCTTACGGTTGTCCGGGTTCTCTCACAGC
TCCTGGATTCGTGAAATGCAGCAGGCTTCAGACAAATCTATTATTATCAGTGAAATCTTA
GATTCCAGGACTAGGAACCTGGTATCAGTGTCCAGAATCAGCGATTATGTACTATCAAAT
GAACTTGTGAGTATGGCACTGGCAATGGTGGCTGAAGACAAGCAAATCAATCGCGTTCTT
GAGGAACTTTTTGCTGAGGAGGGGAACGAAATGTGCATCAAACCGGCAGAGTTCTACTTA
TTTGACCAGGAAGAGATTTCATTTTTTGATATAATGATTCGGGGTCGTCAAAGACAGGAA
ATTGTGATCGGCTACCGGCTTGCTAATACCGAGCGCGCTATAATCAACCCTTCACAAAAA
TCAGAACCTAGGAAATGGTCTCTTGATGATGTTTTTGTTGTCATTTCTTCAGGAGACTGA