Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g01110.1
CDS Infomation

gene=Cs3g01110
Sequence

ATGAGTATGTTTGGAAGAGATCCGTGGGGTGGCCCACTGGAGATCAACGCGGCGGACTCA
GCCACTGACGACGATCGGAGCAGGAACCTTCAGGATTTCGACAGGGCAGCTCTGTCTCGG
CCCTTGGATGAGACCCAGCAGAGCTGGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAG
TACGTAGATCTGGGTTGCATCATCGTCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACT
CTTCTCGTCTCCGCACTCTTAGCCGGCTTCATCACTCTTATTGTCAAAACGGTGCCGCGT
CATCACCACTCTCATGCTCGCCCTGATAATTACACTCTCGCTTTGCACAAGGCCCTCATG
TTCTTCAATGCCCAACGATCTGGCAAATTACCCAAGCATAATAACGTTTCTTGGAGGGGA
AATTCTTGTCTGAAGGATGGCAAATCGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGG
GGTTTTTACGATGCTGGGGATGCCATTAAGTTTAATTTTCCTCAATCTTTTACTATTACC
ATGCTCAGCTGGAGTGTGATTGAGTACAGTGCTAAGTACGAAGCTGCTGGTGAGCTTAAC
CATGTTAAGGAAATTATCAAGTGGGGTACTGATTACTTTCTCAAGACCTTCAATCACTCT
GCTGATTCCATCTCCAGGATGGTTGCTCAGGTTGGTGCTGGGGATACTTCAGGTGGGAGC
ACCACTCCCAATGATCATTATTGCTGGATGCGCCCTGAGGACATTGATTATGATAGACCT
GTTACAGAATGTAGCAGTTGTTCGGATCTCGCTGCTGAAATGGCTGCTTCTTTGGCTGCT
GCCTCCATTGTTTTCAAAGACAACAAGGCCTACTCACAGAAGCTAGTCCATGGTGCCAAA
ACCCTCTTTCAGTTTTCAAGGCAACAGCGAGCCAGATACAGTGCTGGCAGTGCAGAAGCT
GCTAAGTTCTATAATTCTACTAGTTACTGGGATGAGTTTATTTGGGGTGGAGCTTGGTTG
TACTATGCAACAGGGAATTCTTCCTATCTTCAGCTTGCTACTACTCCAGGTCTTGGAAAA
CATGCTGGTGTTTTCTGGGGAATTCTGGACAACAGTGTTCTTAGCTGGGACAACAAGCTT
GCTGGTGCTGCACTGCTTTTGAGCCGATTGAGATTGTTCTTGAGCCCCGGATATCCCTAT
GAAGAAATGTTGAGGACATTTCACAATCAAACCAGTATAACTATGTGCTCTTACCTTCCG
ACTTTTACTACTTGGAATAGAACCAGAGGAGGCTTGATCCAATTAAACCATGGAAACCCG
CAGCCTCTGCAATACGTTGTCAATGCAGCCTTCTTGGCAACCTTATTTAGTGATTATCTT
GATGCTGCTGATACACCTGGATGGTACTGTGGACCCAATTTCTTTTCAACTGATACCTTG
CGGGAATTTGCCAAGACTCAGATCGATTACATCCTTGGTAAAAATCCTCGGAAAATGAGT
TACATTGTGGGTTTTGGTAATCATTACCCTAAACATGTCCACCATAGGGGTGCTTCTATA
CCGAAGAATAAGATCAGATACAATTGTAAAGGAGGATGGAAATTGAGAGACTCTTCAAAG
CCAAACCCAAATACACTTGTGGGAGCCTTGGTTGCTGGTCCTGACAAGCACGATGGTTTC
CGTGATGTTCGTACCAATTACAATTATACAGAACCAACTCTCGCAGGCAATGCAGGTTTA
GTTGCAGCACTTGTGGCTTTGTCAGGCGAAAAGAGCAGAACCACCATTGACAAGAACACC
ATTTTCTCTGCGGTTCCACCAATGTTTCCAACTCCTCCACCACCTCCGGCACCCTGGAAA
CCATGA

Peptide Sequence

PEP ID

Cs3g01110.1
PEP Infomation
Sequence

MSMFGRDPWGGPLEINAADSATDDDRSRNLQDFDRAALSRPLDETQQSWLLGPTEKKKKK
YVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALM
FFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTIT
MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGS
TTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAK
TLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGK
HAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLP
TFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTL
REFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSK
PNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEKSRTTIDKNT
IFSAVPPMFPTPPPPPAPWKP*

Transcript Sequence

Transcript ID

Cs3g01110.1
Transcript Infomation

gene=Cs3g01110 CDS=276-2141
Sequence

AAAGAATCCAATCCCGTCCCTACAATTACAATCCCACATGCGGATATAACACAACAAAGC
ATACATTATTGTTATGGAAAAATTCAGCAAGTAATTTGACAGCCAGATCAGAGCACCACC
GTCACCACCAAATCACACCACACAACTCTACAAAACCAGACCGGAGCATTCACAGTACAA
ACTTTCCATCTTAATTCTTGAGAGAGAAAGAGATCTAACATATCTTTAGCTGAGGGGAGA
GTGAGTGAGTGTGAGATTTGATTTGGTAACAAACAATGAGTATGTTTGGAAGAGATCCGT
GGGGTGGCCCACTGGAGATCAACGCGGCGGACTCAGCCACTGACGACGATCGGAGCAGGA
ACCTTCAGGATTTCGACAGGGCAGCTCTGTCTCGGCCCTTGGATGAGACCCAGCAGAGCT
GGCTTCTGGGTCCCACCGAAAAGAAGAAGAAGAAGTACGTAGATCTGGGTTGCATCATCG
TCAGCCGTAAGATCTTCGTCTGGACTGTCGGCACTCTTCTCGTCTCCGCACTCTTAGCCG
GCTTCATCACTCTTATTGTCAAAACGGTGCCGCGTCATCACCACTCTCATGCTCGCCCTG
ATAATTACACTCTCGCTTTGCACAAGGCCCTCATGTTCTTCAATGCCCAACGATCTGGCA
AATTACCCAAGCATAATAACGTTTCTTGGAGGGGAAATTCTTGTCTGAAGGATGGCAAAT
CGGCTTCCTCTAGTATTTCCAAGGATCTGGTTGGGGGTTTTTACGATGCTGGGGATGCCA
TTAAGTTTAATTTTCCTCAATCTTTTACTATTACCATGCTCAGCTGGAGTGTGATTGAGT
ACAGTGCTAAGTACGAAGCTGCTGGTGAGCTTAACCATGTTAAGGAAATTATCAAGTGGG
GTACTGATTACTTTCTCAAGACCTTCAATCACTCTGCTGATTCCATCTCCAGGATGGTTG
CTCAGGTTGGTGCTGGGGATACTTCAGGTGGGAGCACCACTCCCAATGATCATTATTGCT
GGATGCGCCCTGAGGACATTGATTATGATAGACCTGTTACAGAATGTAGCAGTTGTTCGG
ATCTCGCTGCTGAAATGGCTGCTTCTTTGGCTGCTGCCTCCATTGTTTTCAAAGACAACA
AGGCCTACTCACAGAAGCTAGTCCATGGTGCCAAAACCCTCTTTCAGTTTTCAAGGCAAC
AGCGAGCCAGATACAGTGCTGGCAGTGCAGAAGCTGCTAAGTTCTATAATTCTACTAGTT
ACTGGGATGAGTTTATTTGGGGTGGAGCTTGGTTGTACTATGCAACAGGGAATTCTTCCT
ATCTTCAGCTTGCTACTACTCCAGGTCTTGGAAAACATGCTGGTGTTTTCTGGGGAATTC
TGGACAACAGTGTTCTTAGCTGGGACAACAAGCTTGCTGGTGCTGCACTGCTTTTGAGCC
GATTGAGATTGTTCTTGAGCCCCGGATATCCCTATGAAGAAATGTTGAGGACATTTCACA
ATCAAACCAGTATAACTATGTGCTCTTACCTTCCGACTTTTACTACTTGGAATAGAACCA
GAGGAGGCTTGATCCAATTAAACCATGGAAACCCGCAGCCTCTGCAATACGTTGTCAATG
CAGCCTTCTTGGCAACCTTATTTAGTGATTATCTTGATGCTGCTGATACACCTGGATGGT
ACTGTGGACCCAATTTCTTTTCAACTGATACCTTGCGGGAATTTGCCAAGACTCAGATCG
ATTACATCCTTGGTAAAAATCCTCGGAAAATGAGTTACATTGTGGGTTTTGGTAATCATT
ACCCTAAACATGTCCACCATAGGGGTGCTTCTATACCGAAGAATAAGATCAGATACAATT
GTAAAGGAGGATGGAAATTGAGAGACTCTTCAAAGCCAAACCCAAATACACTTGTGGGAG
CCTTGGTTGCTGGTCCTGACAAGCACGATGGTTTCCGTGATGTTCGTACCAATTACAATT
ATACAGAACCAACTCTCGCAGGCAATGCAGGTTTAGTTGCAGCACTTGTGGCTTTGTCAG
GCGAAAAGAGCAGAACCACCATTGACAAGAACACCATTTTCTCTGCGGTTCCACCAATGT
TTCCAACTCCTCCACCACCTCCGGCACCCTGGAAACCATGAGACACTATCGGAAACTCGA
TGTTTTTCATTTAGTATATGTTGTGTGACTAATGGTCAGATGATTTTGCTGCAGTAGTAG
TTTTTGGAACATGAATCACCTTGGAGGAAAAGATTATGCAAATATGAGCTGGAACCAGCA
TATTGTGGACATCAAGCATTAAAGAGTTGGTGTATCTAGGAATTTGACTTTTGTTTGTAA
TTTGTGATATAAATATTGTATATGTATGATACCAATCTTGTATTCTTTAAAAACATGAGA
AATTTGAAGTTGTTCGAACAATAAATTCCACATAATCTCTAACAGTCACCTTCTGGTTGG
ATAAATTCCCATTCTTTCTTCTTTGATATTGCTTAATTCGCTGTGTATTTTTTTTTTTAA
CTGTTACTGTTATGTTCGCGTACGCGAGTGAACGAAAGTTTTTAATATTCCTTCGTTTTA
AGCACTAGATCTGCATCAACTTGTTCA