Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g28990.1
CDS Infomation

gene=Cs2g28990
Sequence

ATGAGTCAACCTAAAATTAAACGCCGAGTGGGTAAATATGAGGTGGGGAGAACAATTGGT
GAGGGTACATTTGCAAAAGTTAAGTTTGCAAGGAATTCTGAGACAGGCGAACCTGTTGCT
CTTAAGATTCTTGATAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAAGCGG
GAAGTTGCAACAATGAAATTGGTTAAGCATCCAAATGTTGTGCGATTATATGAGGTGATG
GGAAGCAAGACTAAAATATTTATTGTCTTGGAGTTCGTCACAGGGGGAGAGCTGTTTGAC
AAAATTGTAAATCATGGGCGGATGAAGGAAGATGAGGCACGGAGATACTTTCAGCAGCTT
ATTAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAGCCAGAA
AATCTATTGTTGGATGCTTATGGAAACCTAAAAGTGTCTGATTTTGGATTGAGTGCTTTG
TCACAACAAGTCAGGGATGATGGTCTTCTTCACACTACTTGTGGAACTCCTAATTATGTT
GCTCCCGAGGTTCTTAATGATAGAGGCTACGATGGCTCAACCGCTGACTTGTGGTCTTGT
GGAGTGATACTATTTGTATTACTTGCAGGGTACTTGCCTTTCGATGATTCTAATCTTATG
AACCTGTATAAAAAAATTTCTGCTGCTGAGTTCACTTGTCCGCCTTGGCTCTCTTTCACT
GCCAGGAAATTGATTGCTCGCATCTTGGATCCAAACCCAATGACTCGTATTACTATACCG
GAAATATTGGAAGATGAATGGTTTAAAAAAGATTACAAACCTCCAGTGTTTGAGGAGAAA
AAAGATACGAACTTGGATGATGTGGAAGCTGTTTTTAAGGACTCAGAAGAGCACCATGTG
ACAGAGCAGAAAGAAGAACAGCCAGTAGCAATGAATGCGTTTGAGTTGATTTCTTTGTCA
AAAGGACTGAACCTTGGGAATTTGTTTGATGCAGAACAGGATTTCAAGAGAGAGACAAGG
TTCACATCTAGATGTCCTGCTAATGAGATAATTAATAAAATTGAAGAAGCGGCAAAGCCT
CTTGGTTTTGATGTTCACAAGAAAAATTACAAGATGAGGCTTGAAAATATGAAAGCTGGT
AGAAAGGGAAACCTTAATGTGGCCACGGAGGTTTTTCAAGTGGCACCTTCTCTTCATATG
GTTGAGGTGCGAAAAGCAAAAGGGGACACTTTGGAGTTTCATAAGTTCTATAAAAATCTT
TCAACCTGCCTAGAGGATGTTGTTTGGAAAACTGAGGAGGATATGCAGGAAATGAAATAA

Peptide Sequence

PEP ID

Cs2g28990.1
PEP Infomation
Sequence

MSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIKR
EVATMKLVKHPNVVRLYEVMGSKTKIFIVLEFVTGGELFDKIVNHGRMKEDEARRYFQQL
INAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYV
APEVLNDRGYDGSTADLWSCGVILFVLLAGYLPFDDSNLMNLYKKISAAEFTCPPWLSFT
ARKLIARILDPNPMTRITIPEILEDEWFKKDYKPPVFEEKKDTNLDDVEAVFKDSEEHHV
TEQKEEQPVAMNAFELISLSKGLNLGNLFDAEQDFKRETRFTSRCPANEIINKIEEAAKP
LGFDVHKKNYKMRLENMKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKNL
STCLEDVVWKTEEDMQEMK*

Transcript Sequence

Transcript ID

Cs2g28990.1
Transcript Infomation

gene=Cs2g28990 CDS=552-1871
Sequence

TTTCTTAGAAGCATTTTCTCTTACTAGTGAAAGCGAAAGTGCCTTTTATAATCACATTCT
AAACTCCATTATTGGAATTTAGAAATGATAAAATTAAAATTAAAGAGAGAGAGAGAGAGA
GAGAGAGAGAGTTAAAAAGTGGAAGATTGGTAACCGAAGGCAGAAGAAGAAGCAGCAGTC
AAGTTTGTTTTTTAGACGGTGGGGAGAGTGAGTTCTATTACGAGTTATGCTGCGTGTTTT
GTCTTGATGCAGTAGAAAACGAGATGAAAAACGAGTCTTCTTGTCTTTTCAACCACGTCA
AGAGCCATTTTTTTGCCAGCTTAGCTTCTTTTATCTCCATTCTGTAACCAAAGTTCAAAA
TATAACAAACACGTGACGCCGTTCTTGAGTTTACTTTCAGACTCCTACTCAGATTTCTTC
AGTTTTCTGGGGGCAATTCTTGAAATTGGAAATTCGAGGAGGACTTCATCAATTTCTTGT
GTTACCATTTGGGGAAGAGTTTAAAGCCTGCAGAACATTCAGTAGAAGAAGGCACAGCTT
GTAAATCGAACATGAGTCAACCTAAAATTAAACGCCGAGTGGGTAAATATGAGGTGGGGA
GAACAATTGGTGAGGGTACATTTGCAAAAGTTAAGTTTGCAAGGAATTCTGAGACAGGCG
AACCTGTTGCTCTTAAGATTCTTGATAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAAC
AGATCAAGCGGGAAGTTGCAACAATGAAATTGGTTAAGCATCCAAATGTTGTGCGATTAT
ATGAGGTGATGGGAAGCAAGACTAAAATATTTATTGTCTTGGAGTTCGTCACAGGGGGAG
AGCTGTTTGACAAAATTGTAAATCATGGGCGGATGAAGGAAGATGAGGCACGGAGATACT
TTCAGCAGCTTATTAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACC
TGAAGCCAGAAAATCTATTGTTGGATGCTTATGGAAACCTAAAAGTGTCTGATTTTGGAT
TGAGTGCTTTGTCACAACAAGTCAGGGATGATGGTCTTCTTCACACTACTTGTGGAACTC
CTAATTATGTTGCTCCCGAGGTTCTTAATGATAGAGGCTACGATGGCTCAACCGCTGACT
TGTGGTCTTGTGGAGTGATACTATTTGTATTACTTGCAGGGTACTTGCCTTTCGATGATT
CTAATCTTATGAACCTGTATAAAAAAATTTCTGCTGCTGAGTTCACTTGTCCGCCTTGGC
TCTCTTTCACTGCCAGGAAATTGATTGCTCGCATCTTGGATCCAAACCCAATGACTCGTA
TTACTATACCGGAAATATTGGAAGATGAATGGTTTAAAAAAGATTACAAACCTCCAGTGT
TTGAGGAGAAAAAAGATACGAACTTGGATGATGTGGAAGCTGTTTTTAAGGACTCAGAAG
AGCACCATGTGACAGAGCAGAAAGAAGAACAGCCAGTAGCAATGAATGCGTTTGAGTTGA
TTTCTTTGTCAAAAGGACTGAACCTTGGGAATTTGTTTGATGCAGAACAGGATTTCAAGA
GAGAGACAAGGTTCACATCTAGATGTCCTGCTAATGAGATAATTAATAAAATTGAAGAAG
CGGCAAAGCCTCTTGGTTTTGATGTTCACAAGAAAAATTACAAGATGAGGCTTGAAAATA
TGAAAGCTGGTAGAAAGGGAAACCTTAATGTGGCCACGGAGGTTTTTCAAGTGGCACCTT
CTCTTCATATGGTTGAGGTGCGAAAAGCAAAAGGGGACACTTTGGAGTTTCATAAGTTCT
ATAAAAATCTTTCAACCTGCCTAGAGGATGTTGTTTGGAAAACTGAGGAGGATATGCAGG
AAATGAAATAAACTGGTTTGAAGAAAGAGTGATGATACAATCTTTCCTTGATGCTATCTT
GTTGCTTTTATATCTTCATTCTTTTACCCTCTTTCTTGTAGATACACGATCAAGGATTCA
TCAATTGTTTTCCTGTGTTATTATTGTTGGAAAGCATGGATGATTCCCATAGTGGAGGAG
CTTTTTTGTCTTGGTAATCCCTTTAGTGACAAATTCTTTATAAATGGAACCGTGTATATA
TTAGACATGGAAATTATAATTTTAATCTAGGGTTGGCCAAAAAAAAAAACTCCAGCAAGT
CCGGTTCGACCAGGCTTTAGCCCAACCTGATGGGCCGGTCCGGTGCTGCTGTTTAAAAAA
ATAATTTTTTTGAAAAAAATTTTACTTGATATATCCTTTTCTTAAATATTTAGTTATACC
TCTTTTTTTT