Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g10880.2
CDS Infomation

gene=Cs2g10880
Sequence

ATGGAACTGCGAAAGCATATATCTGCTCAAGGGATTCTTGTCCAAGATTTGATGACGGGT
GTTTGCCGTCAGTTGGAGGAGTTGTCAGTAGCCAATGGAAACATTGATGAATCTCTGTCA
GATCCACAAAAGATTGAACTTGAAGACCCTTTGCCAAATGAAATAGACAAATGCAAGATG
ATATTCTTGGAGAAAATTGATGTTCTTCTGGCTGAACATAAGGTGGAAGAAGCAATAGAG
GTTTTAGATGCTGAAGAGAGAAACTTTCCAGAATTGAGGAGCTCAGGTGAAGCTTCATCA
GCTCAAGCTTCCTCGTTCAAAAGTGATTTCTTGAAAAGAAAGGCAATGGTTGAGGATCAG
TTGGTTAAGATTACTGAACAGCCTTCAATCGGTATTCTAGAGCTGAAGAAGGCCTTAACT
GATTTAATCAAACTTGGTAAGGGTCCTTTAGCACACCAATTACTGCTGAAATATTATGCG
TCCCGTCTCCAAAGGAGCTTTGAGGTTTATCTTCCTTCATCTTCTGTATGTCCCGAAGTA
TTTCCAGCTACAATATCTAAGCTTGTTTTTTCTACAGTATCATTGACAACAAAAGACTCT
GGTTTGATTTTTGGCGACAATCCTGTATATAGTAATAGAGTTGTCCAATGGGCAGAATGG
GAAATTGAATATTTTGTAAGGTTGGTGAAGGAGAATGCACCACCTTCTGAGACAATCTCT
GCCATGCGTGCAGCTAGCATTTCTGTTGAGGCTAGTGTTAACTACTGTTCATTGTTGGAA
TCGCAAGGCCTAAAATTGTCAAGGTTGCTTTTGTTGCTCTTGCGGCCCTACATTGAAGAA
GTCTTAGAATTGAACTTTAGACGGGCTAGAAAAATGGTGTTCAACTTGGAGGATATTGAT
GAAAGCTTGCTGTTGTCACCTCACTTTATGTCTCCATTGTCTCTGTTTGCGACATCGTCA
GATAGCATGCTTGTTGATAGCGGAAGTAGATTTATGCACATTGTTGAGGAGATATTGGAG
CAGCTAACCCCCCTGGTTGTTCTGCATTTTGGAGGAAACATATTGACTAGAATTTCACAG
TTATTTGATAAATACTTGGATGCACTGAATAGAGCCCTACCTGGTCCTTCAGACGATGAC
AATCTGACTGAGTTGAAGGAGACCATACCCTTTCGAGCTGAGACAGATTCAGAACAACTT
TCACTCTTAGGAGTAGCATTTACAATCATGGATGAACTTCTACCAAATACTGTGTCAAAA
GTCTGGAATCCCAAGAATGAAAGCAAAGAAGTGGGAAATGAAAACATTGCGCCTAATGCT
AGCACTACAACTGAACTAAAGGATTGGAAACGCCATCTTCAGCATTCATTTGACAAACTT
AGAGATCACTTTTGTCGGCAATATGTTCTGAGTTTCATCTATTCAAGAGAGGGAAAAACA
CGATTAAATGGACAAATATATTTAAGTGGAAATGAGGAATATACACAGTGGGATTCTGAT
CCTCTGCCTTCACTTCCATTTCAGGCGCTCTTTGCAAAGCTTCAGCAGTTGGCAACTGTT
GCTGGAGATGTGCTGCTTGGGAAAGAAAAGTTACAGAAAATTTTGCTTGCTAGGTTGACA
GAGACAGTTGTGATGTGGTTGTCTGCTGAACAGGAATTCTGGGCTGTGTTCGAGGATGAA
TCATCTCCAATTCAGCCACTTGGGTTGCAACAGCTCATTCTTGATATGCACTTTACCGTT
GAAATTGCACGTTTTGCGGGCTACCCATCTCGTCATGTACACCAGATTGCATCTGCCATA
ATTGCTCGAGCAATCAGGACCTTTTCTACTAGAGGCATAGACCCAAGTGCACTCCCTGAG
GATGAATGGTTTGTTGAAACTGCAAAGTCAGCGATTAACAAACTTCTATTAGGAGGATCT
GGGTCAGATGCCTCGGATATCGATGAGGAACATATTATCCTAAACGATGACGTAGACTCA
GATTCAGCTGATACTGCTTCTTCACTATCAACTGTAGAATCGTATGAATCTTTTGCTTCT
GCAAGTATGGGTGAACTTGAGAGCCCAAACTTCACTGATCCTGAGGCCTAA

Peptide Sequence

PEP ID

Cs2g10880.2
PEP Infomation
Sequence

MELRKHISAQGILVQDLMTGVCRQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKM
IFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQ
LVKITEQPSIGILELKKALTDLIKLGKGPLAHQLLLKYYASRLQRSFEVYLPSSSVCPEV
FPATISKLVFSTVSLTTKDSGLIFGDNPVYSNRVVQWAEWEIEYFVRLVKENAPPSETIS
AMRAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEVLELNFRRARKMVFNLEDID
ESLLLSPHFMSPLSLFATSSDSMLVDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQ
LFDKYLDALNRALPGPSDDDNLTELKETIPFRAETDSEQLSLLGVAFTIMDELLPNTVSK
VWNPKNESKEVGNENIAPNASTTTELKDWKRHLQHSFDKLRDHFCRQYVLSFIYSREGKT
RLNGQIYLSGNEEYTQWDSDPLPSLPFQALFAKLQQLATVAGDVLLGKEKLQKILLARLT
ETVVMWLSAEQEFWAVFEDESSPIQPLGLQQLILDMHFTVEIARFAGYPSRHVHQIASAI
IARAIRTFSTRGIDPSALPEDEWFVETAKSAINKLLLGGSGSDASDIDEEHIILNDDVDS
DSADTASSLSTVESYESFASASMGELESPNFTDPEA*

Transcript Sequence

Transcript ID

Cs2g10880.2
Transcript Infomation

gene=Cs2g10880 CDS=119-2209
Sequence

TGCTAATGGGCAATTTGGTTATATATGATAGATACTAAAAATAATTAAATAAGCATCTCA
TGATTACAATGATAATTGTAGACTATCTGAAGAAGTTGTAGAAACGGAGCATGAACTGAT
GGAACTGCGAAAGCATATATCTGCTCAAGGGATTCTTGTCCAAGATTTGATGACGGGTGT
TTGCCGTCAGTTGGAGGAGTTGTCAGTAGCCAATGGAAACATTGATGAATCTCTGTCAGA
TCCACAAAAGATTGAACTTGAAGACCCTTTGCCAAATGAAATAGACAAATGCAAGATGAT
ATTCTTGGAGAAAATTGATGTTCTTCTGGCTGAACATAAGGTGGAAGAAGCAATAGAGGT
TTTAGATGCTGAAGAGAGAAACTTTCCAGAATTGAGGAGCTCAGGTGAAGCTTCATCAGC
TCAAGCTTCCTCGTTCAAAAGTGATTTCTTGAAAAGAAAGGCAATGGTTGAGGATCAGTT
GGTTAAGATTACTGAACAGCCTTCAATCGGTATTCTAGAGCTGAAGAAGGCCTTAACTGA
TTTAATCAAACTTGGTAAGGGTCCTTTAGCACACCAATTACTGCTGAAATATTATGCGTC
CCGTCTCCAAAGGAGCTTTGAGGTTTATCTTCCTTCATCTTCTGTATGTCCCGAAGTATT
TCCAGCTACAATATCTAAGCTTGTTTTTTCTACAGTATCATTGACAACAAAAGACTCTGG
TTTGATTTTTGGCGACAATCCTGTATATAGTAATAGAGTTGTCCAATGGGCAGAATGGGA
AATTGAATATTTTGTAAGGTTGGTGAAGGAGAATGCACCACCTTCTGAGACAATCTCTGC
CATGCGTGCAGCTAGCATTTCTGTTGAGGCTAGTGTTAACTACTGTTCATTGTTGGAATC
GCAAGGCCTAAAATTGTCAAGGTTGCTTTTGTTGCTCTTGCGGCCCTACATTGAAGAAGT
CTTAGAATTGAACTTTAGACGGGCTAGAAAAATGGTGTTCAACTTGGAGGATATTGATGA
AAGCTTGCTGTTGTCACCTCACTTTATGTCTCCATTGTCTCTGTTTGCGACATCGTCAGA
TAGCATGCTTGTTGATAGCGGAAGTAGATTTATGCACATTGTTGAGGAGATATTGGAGCA
GCTAACCCCCCTGGTTGTTCTGCATTTTGGAGGAAACATATTGACTAGAATTTCACAGTT
ATTTGATAAATACTTGGATGCACTGAATAGAGCCCTACCTGGTCCTTCAGACGATGACAA
TCTGACTGAGTTGAAGGAGACCATACCCTTTCGAGCTGAGACAGATTCAGAACAACTTTC
ACTCTTAGGAGTAGCATTTACAATCATGGATGAACTTCTACCAAATACTGTGTCAAAAGT
CTGGAATCCCAAGAATGAAAGCAAAGAAGTGGGAAATGAAAACATTGCGCCTAATGCTAG
CACTACAACTGAACTAAAGGATTGGAAACGCCATCTTCAGCATTCATTTGACAAACTTAG
AGATCACTTTTGTCGGCAATATGTTCTGAGTTTCATCTATTCAAGAGAGGGAAAAACACG
ATTAAATGGACAAATATATTTAAGTGGAAATGAGGAATATACACAGTGGGATTCTGATCC
TCTGCCTTCACTTCCATTTCAGGCGCTCTTTGCAAAGCTTCAGCAGTTGGCAACTGTTGC
TGGAGATGTGCTGCTTGGGAAAGAAAAGTTACAGAAAATTTTGCTTGCTAGGTTGACAGA
GACAGTTGTGATGTGGTTGTCTGCTGAACAGGAATTCTGGGCTGTGTTCGAGGATGAATC
ATCTCCAATTCAGCCACTTGGGTTGCAACAGCTCATTCTTGATATGCACTTTACCGTTGA
AATTGCACGTTTTGCGGGCTACCCATCTCGTCATGTACACCAGATTGCATCTGCCATAAT
TGCTCGAGCAATCAGGACCTTTTCTACTAGAGGCATAGACCCAAGTGCACTCCCTGAGGA
TGAATGGTTTGTTGAAACTGCAAAGTCAGCGATTAACAAACTTCTATTAGGAGGATCTGG
GTCAGATGCCTCGGATATCGATGAGGAACATATTATCCTAAACGATGACGTAGACTCAGA
TTCAGCTGATACTGCTTCTTCACTATCAACTGTAGAATCGTATGAATCTTTTGCTTCTGC
AAGTATGGGTGAACTTGAGAGCCCAAACTTCACTGATCCTGAGGCCTAAGTTTTGTGTTT
AGGTGGTTTAGCATTGATTTTTAGATAGGAAAAAATGACTCCATTCTTTAACGCAAGAGG
ATGGTAGACGGATCACTTGTCGGGTGAAGATTTTTGAATTGCAGATGTGTGTTGGATGAT
GCAATCAATATACAGGTCAAGAGGAGAAAAACGACGGCAAGTGTTGTAATAGATGAGAAT
CTTTTGTTGTAATGTTGTATCTTGTAGTATTTGTCCTTGGATATAATTGTAAAACTGTTG
TATGAAAAGCAATCCTAAGTTATTATTTATGACCCTCAATCCCTAAGGAACTTCTGAAAA
TTTATACCATTGCTGGATGCTCTCCCATTTTTGTTTTCTTGTTCATGGTGGATTCATAAC
CGGGGGTAAATTTTC