Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g06880.1
CDS Infomation

gene=Cs2g06880
Sequence

ATGGAAGAAGAAAGACAGAGAAAAGACCAAAACACATCAGAAGTAGACAGTGTCAAGCAA
GCCATTACAAAAGTACTGGCGCTCTTGACTTCCCATAAAGATCACAACTCCGCCTCCCTG
GTCTGCAAAGATTGGTACGAGGCAGAACAGTTGTCGAGAACTCACGTATTCATCGGGAAC
TGCTATGCGGTCTCACCCGAGATTCTAACGCGCCGGTTTCCTAACATTCTGAGCGTGACG
CTGAAAGGGAAGCCGAGATTCTCGGATTTCAATTTGGTTCCACAAGACTGGGGCGCCGAT
ATTCACCCATGGCTGGTAGCGTTTGCTGACAGGTATCCGTCGCTTGAGGAGTTGAGGCTG
AAGAGAATGAGTGTCAGTGATGAGAGTTTGGAGTTCTTGGCTGTCAGTTTTCCCAATTTC
AAGGTTCTTTCGCTTTCCAGTTGTGATGGATTCAGTACTGATGGTCTTGCTGCTATTGCT
ACTAACTGCAAGAATTTGACTGAGCTTGACATTCAGGAGAATGGTATTGAGGATATAAGC
GGAAGCTGGCTGAGCTGCTTCCCTGAAAGCTTCACATCATTGGAAGTACTCAACTTTGCC
AATGTGAACTCTGAAGTTGATTTTGATGCACTTGAGAAACTCGTAAGCAGGTGCAAGTCA
TTGAAAGATTTGAAAGTCAACAAAAGTATTTCCTTGGAGCAATTACAAAAGCTACTTGTT
CTTGCTCCTCAACTAGTAGACCTTGGTACCGGTTCATTCTCGCAAGAACTAACTGACGAC
CAGCGCGCTGAGCTGGAGAGTGCATTCAATAAGTGCAAGAATATACATAAGCTCTCAGGT
TTATGGCAAGCAACGGCATTGTATTTTCCAGCTTTATCTCCTGTTTGTGCAAATTTGACA
TTCTTGAATTTGAGCTATGCGACTTTGGGGAGTAGTGAACTTGTCAAGCTTCTTATGCAT
TGCCCTCTTCTTAAGCGGCTCTGGGTGCTGGACACAGTAGAAGACAGAGGACTGGAGGCA
GTAGGTTCCAGTTGTCCATTGCTCGAAGAACTCCGCGTTTTCCCCGCTGATCCCTTTGAT
GAGGAAATTACTTACGGGGTTACAGAAGCAGGGTTTTTAGCAGTGTCCCATGGCTGTCCG
AGACTTCAGTACGTTCTGTACTTTTGTCAGGCGATGACCAATGCTGCTGTGGCAACAATT
GTGCGGAACTGCCCCAATTTCACCTGCTTCCGCCTTTGTATAATGAATCCGGGACAGCCA
GATTACGTGACAAATGAACCCATGGATGAGGCCTTTGGTGCGGTGGTGAGGACTTGTACC
AACCTTCAAAGGCTTTCACTTTCAGGCCTCTTAACAGACCTTACATTTGAGTACATTGGC
CAGTATGCCAAAAATTTGGAACTCCTGTCGGTAGCTTTTGCTGGGAGCAGTGATTGGGGT
ATGCAATGTGTGCTAAGAGGTTGTCCAAAGCTGAGGAAATTTGAGATAAGGGATTGCCCA
TTTGGGGACGCAGCTCTACTCTCAGGATTGGACAAGTGTGAATCAATGAGGTCACTTTGG
ATGTCAGCATGCAATGTGACAATGGATGGTTGTAAGTTATTGGCAAGCAAAAAGCCAAGG
TTGAATGTTGAGGTGATTAAGGAAGCCGAGAGTGATGACAATCAAGCTGACAAGGTTTAT
GTTTACCGCACTGTTGCTGGACCAAGAAAGGATGCCCCGCCTTCTGTAATCACCCTCCGT
CTGTTTCTGAAGGCACAGAACAAGAGCAATAACCTTTGGGCCAAACACCCAACTCAAGCT
TGTTTGAACGCTTTCTTTCAAATTGCCTTACTTTTGGACACTCCGTTGCCTAAAGGCTTC
TACGGCAATTGCTTCTTTCCTGTGACTATTACTACAACAGGTGATTGGCTTACACAGGCG
TCGAATGTTGATATGGTGAAGTTGATACAAGAAGCAAAAGCCAAGCTACCTATTGAATTT
GCCAACTATAAGACAAATCACTGTGGTGTCACAGGTCTTCAAAAGAACATCAACGCCATT
GGCAGTTCTGGAGTTGCTTCTAAGATTTCACTTCGCAAGTAA

Peptide Sequence

PEP ID

Cs2g06880.1
PEP Infomation
Sequence

MEEERQRKDQNTSEVDSVKQAITKVLALLTSHKDHNSASLVCKDWYEAEQLSRTHVFIGN
CYAVSPEILTRRFPNILSVTLKGKPRFSDFNLVPQDWGADIHPWLVAFADRYPSLEELRL
KRMSVSDESLEFLAVSFPNFKVLSLSSCDGFSTDGLAAIATNCKNLTELDIQENGIEDIS
GSWLSCFPESFTSLEVLNFANVNSEVDFDALEKLVSRCKSLKDLKVNKSISLEQLQKLLV
LAPQLVDLGTGSFSQELTDDQRAELESAFNKCKNIHKLSGLWQATALYFPALSPVCANLT
FLNLSYATLGSSELVKLLMHCPLLKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFD
EEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQP
DYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWG
MQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPR
LNVEVIKEAESDDNQADKVYVYRTVAGPRKDAPPSVITLRLFLKAQNKSNNLWAKHPTQA
CLNAFFQIALLLDTPLPKGFYGNCFFPVTITTTGDWLTQASNVDMVKLIQEAKAKLPIEF
ANYKTNHCGVTGLQKNINAIGSSGVASKISLRK*

Transcript Sequence

Transcript ID

Cs2g06880.1
Transcript Infomation

gene=Cs2g06880 CDS=1-2082
Sequence

ATGGAAGAAGAAAGACAGAGAAAAGACCAAAACACATCAGAAGTAGACAGTGTCAAGCAA
GCCATTACAAAAGTACTGGCGCTCTTGACTTCCCATAAAGATCACAACTCCGCCTCCCTG
GTCTGCAAAGATTGGTACGAGGCAGAACAGTTGTCGAGAACTCACGTATTCATCGGGAAC
TGCTATGCGGTCTCACCCGAGATTCTAACGCGCCGGTTTCCTAACATTCTGAGCGTGACG
CTGAAAGGGAAGCCGAGATTCTCGGATTTCAATTTGGTTCCACAAGACTGGGGCGCCGAT
ATTCACCCATGGCTGGTAGCGTTTGCTGACAGGTATCCGTCGCTTGAGGAGTTGAGGCTG
AAGAGAATGAGTGTCAGTGATGAGAGTTTGGAGTTCTTGGCTGTCAGTTTTCCCAATTTC
AAGGTTCTTTCGCTTTCCAGTTGTGATGGATTCAGTACTGATGGTCTTGCTGCTATTGCT
ACTAACTGCAAGAATTTGACTGAGCTTGACATTCAGGAGAATGGTATTGAGGATATAAGC
GGAAGCTGGCTGAGCTGCTTCCCTGAAAGCTTCACATCATTGGAAGTACTCAACTTTGCC
AATGTGAACTCTGAAGTTGATTTTGATGCACTTGAGAAACTCGTAAGCAGGTGCAAGTCA
TTGAAAGATTTGAAAGTCAACAAAAGTATTTCCTTGGAGCAATTACAAAAGCTACTTGTT
CTTGCTCCTCAACTAGTAGACCTTGGTACCGGTTCATTCTCGCAAGAACTAACTGACGAC
CAGCGCGCTGAGCTGGAGAGTGCATTCAATAAGTGCAAGAATATACATAAGCTCTCAGGT
TTATGGCAAGCAACGGCATTGTATTTTCCAGCTTTATCTCCTGTTTGTGCAAATTTGACA
TTCTTGAATTTGAGCTATGCGACTTTGGGGAGTAGTGAACTTGTCAAGCTTCTTATGCAT
TGCCCTCTTCTTAAGCGGCTCTGGGTGCTGGACACAGTAGAAGACAGAGGACTGGAGGCA
GTAGGTTCCAGTTGTCCATTGCTCGAAGAACTCCGCGTTTTCCCCGCTGATCCCTTTGAT
GAGGAAATTACTTACGGGGTTACAGAAGCAGGGTTTTTAGCAGTGTCCCATGGCTGTCCG
AGACTTCAGTACGTTCTGTACTTTTGTCAGGCGATGACCAATGCTGCTGTGGCAACAATT
GTGCGGAACTGCCCCAATTTCACCTGCTTCCGCCTTTGTATAATGAATCCGGGACAGCCA
GATTACGTGACAAATGAACCCATGGATGAGGCCTTTGGTGCGGTGGTGAGGACTTGTACC
AACCTTCAAAGGCTTTCACTTTCAGGCCTCTTAACAGACCTTACATTTGAGTACATTGGC
CAGTATGCCAAAAATTTGGAACTCCTGTCGGTAGCTTTTGCTGGGAGCAGTGATTGGGGT
ATGCAATGTGTGCTAAGAGGTTGTCCAAAGCTGAGGAAATTTGAGATAAGGGATTGCCCA
TTTGGGGACGCAGCTCTACTCTCAGGATTGGACAAGTGTGAATCAATGAGGTCACTTTGG
ATGTCAGCATGCAATGTGACAATGGATGGTTGTAAGTTATTGGCAAGCAAAAAGCCAAGG
TTGAATGTTGAGGTGATTAAGGAAGCCGAGAGTGATGACAATCAAGCTGACAAGGTTTAT
GTTTACCGCACTGTTGCTGGACCAAGAAAGGATGCCCCGCCTTCTGTAATCACCCTCCGT
CTGTTTCTGAAGGCACAGAACAAGAGCAATAACCTTTGGGCCAAACACCCAACTCAAGCT
TGTTTGAACGCTTTCTTTCAAATTGCCTTACTTTTGGACACTCCGTTGCCTAAAGGCTTC
TACGGCAATTGCTTCTTTCCTGTGACTATTACTACAACAGGTGATTGGCTTACACAGGCG
TCGAATGTTGATATGGTGAAGTTGATACAAGAAGCAAAAGCCAAGCTACCTATTGAATTT
GCCAACTATAAGACAAATCACTGTGGTGTCACAGGTCTTCAAAAGAACATCAACGCCATT
GGCAGTTCTGGAGTTGCTTCTAAGATTTCACTTCGCAAGTAA