Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g06220.3
CDS Infomation

gene=Cs2g06220
Sequence

ATGCCGCTGGTGAAGATCATAGCGAAAAATTTCATGGACATGGTGGCGTCACTGACCGCT
AGAGACCTCGATAGGCTCTACGAGAATCCCTTCATTTGCGAAGCCATTCTCAGGTCACTG
CCACCACTAGCAAAGAAGTATGTAATGCAAATGTTCTACATTGATGGTGCAATACCGGCT
AAGATGATGGAGGAGTGGGTGCTTCCAGATGGGTTCACTAAGCACAGGGTAGCCATTGAT
CGGTTGGTTCAGTTGAGATTATTTTCAGAGGAAAAGAAGAAGGAAACCACTTACAGATTA
AATTCAACATTCCAGTCTAACCTCCGGAAGCATTTAATATATGGTGGAGCTTTGCCAAGG
GAACCAATGCCTTCTGGTATTACTGCAAGGCTCCCAACCTTGGAGGACCTTGAGGCCTAT
GCCATTGGACAATGGGAGTGTTTCTTGCTGCAACTTATTAGTTCAACCCAAGCTGAGAGG
CCAACAAATTTCAGCTCTTCCATGATGAAGGTTTTCCAGCGTGGTCTTTTGAGTCGAAGG
GATAAAGAAGCCCCAAGATTAACAGAGAGTGGTTTTCAATTTTTGCTGATGGATACTAAT
GCACAGCTGTGGTACATCGTTAGAGAATATATCTCCAATTCCCAGGAACGAGGCATAAAT
CAAGCAGATCTGATTTCTTTTCTTCTGGAGCTTAGTTTCCACGTCGCTGGTGAGGGCAGG
AAAGAGAATTGGTTTATACCTACTAAATTAGCTACCAATCTTTCAATGAGCTTAACTGAT
TCATCAGCACGGAAAGAGGGATTTATTGTAGTGGAAACAAACTTCAGGATGTATGCTTAT
TCAACATCTAAGCTACACTGTGAAATTTTGCGTCTTTTCTCAAAGGTAGAGTATCAACTT
CCAAACCTTATAGTTGGAGCAATAACCAAAGAAAGCTTGTATAATGCTTTTGAGAATGGG
ATTACTGCTGAGCAGATAATTAGTTTTCTTCAGCAAAATGCACATCCTCGGGTTGCTGAC
AGAATGCCATCCGTACCAGAAAATGTCTGTGATCAGATAAGATTGTGGGAATCAGATCTG
AATAGGGTTGAGATGACCCCTGCTCATTATTATGATGAGTTTCCCTCTAGGGATGTCTTT
GAAGCTGCTTGTGACTATGCAAGAGATCAAAGTGGTTTGCTATGGGAGGATCCAAAGAAA
ATGCGTCTAGTCGTTAAGGCAGAAATTCACATGCACATGAGAGAGTTCCTTCGGGGTCAA
AACAAGTAG

Peptide Sequence

PEP ID

Cs2g06220.3
PEP Infomation
Sequence

MPLVKIIAKNFMDMVASLTARDLDRLYENPFICEAILRSLPPLAKKYVMQMFYIDGAIPA
KMMEEWVLPDGFTKHRVAIDRLVQLRLFSEEKKKETTYRLNSTFQSNLRKHLIYGGALPR
EPMPSGITARLPTLEDLEAYAIGQWECFLLQLISSTQAERPTNFSSSMMKVFQRGLLSRR
DKEAPRLTESGFQFLLMDTNAQLWYIVREYISNSQERGINQADLISFLLELSFHVAGEGR
KENWFIPTKLATNLSMSLTDSSARKEGFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQL
PNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVADRMPSVPENVCDQIRLWESDL
NRVEMTPAHYYDEFPSRDVFEAACDYARDQSGLLWEDPKKMRLVVKAEIHMHMREFLRGQ
NK*

Transcript Sequence

Transcript ID

Cs2g06220.3
Transcript Infomation

gene=Cs2g06220 CDS=158-1426
Sequence

CTTAACACTAATCAGACTCGGGGTTCTCGAAGTATAAGAACGCCGGAAAAAGGATGGATT
CCAAATTCTCATTCATAATAAAATTCTCTTAATCATTAAAGCCCTTACAAAAGCTTGAAG
TTATTAAATCCCAAAAAAGAGGAATTTGGCAGTAACAATGCCGCTGGTGAAGATCATAGC
GAAAAATTTCATGGACATGGTGGCGTCACTGACCGCTAGAGACCTCGATAGGCTCTACGA
GAATCCCTTCATTTGCGAAGCCATTCTCAGGTCACTGCCACCACTAGCAAAGAAGTATGT
AATGCAAATGTTCTACATTGATGGTGCAATACCGGCTAAGATGATGGAGGAGTGGGTGCT
TCCAGATGGGTTCACTAAGCACAGGGTAGCCATTGATCGGTTGGTTCAGTTGAGATTATT
TTCAGAGGAAAAGAAGAAGGAAACCACTTACAGATTAAATTCAACATTCCAGTCTAACCT
CCGGAAGCATTTAATATATGGTGGAGCTTTGCCAAGGGAACCAATGCCTTCTGGTATTAC
TGCAAGGCTCCCAACCTTGGAGGACCTTGAGGCCTATGCCATTGGACAATGGGAGTGTTT
CTTGCTGCAACTTATTAGTTCAACCCAAGCTGAGAGGCCAACAAATTTCAGCTCTTCCAT
GATGAAGGTTTTCCAGCGTGGTCTTTTGAGTCGAAGGGATAAAGAAGCCCCAAGATTAAC
AGAGAGTGGTTTTCAATTTTTGCTGATGGATACTAATGCACAGCTGTGGTACATCGTTAG
AGAATATATCTCCAATTCCCAGGAACGAGGCATAAATCAAGCAGATCTGATTTCTTTTCT
TCTGGAGCTTAGTTTCCACGTCGCTGGTGAGGGCAGGAAAGAGAATTGGTTTATACCTAC
TAAATTAGCTACCAATCTTTCAATGAGCTTAACTGATTCATCAGCACGGAAAGAGGGATT
TATTGTAGTGGAAACAAACTTCAGGATGTATGCTTATTCAACATCTAAGCTACACTGTGA
AATTTTGCGTCTTTTCTCAAAGGTAGAGTATCAACTTCCAAACCTTATAGTTGGAGCAAT
AACCAAAGAAAGCTTGTATAATGCTTTTGAGAATGGGATTACTGCTGAGCAGATAATTAG
TTTTCTTCAGCAAAATGCACATCCTCGGGTTGCTGACAGAATGCCATCCGTACCAGAAAA
TGTCTGTGATCAGATAAGATTGTGGGAATCAGATCTGAATAGGGTTGAGATGACCCCTGC
TCATTATTATGATGAGTTTCCCTCTAGGGATGTCTTTGAAGCTGCTTGTGACTATGCAAG
AGATCAAAGTGGTTTGCTATGGGAGGATCCAAAGAAAATGCGTCTAGTCGTTAAGGCAGA
AATTCACATGCACATGAGAGAGTTCCTTCGGGGTCAAAACAAGTAGAATGATATGTTTTC
TTGACCATGCAGAACTTACTGAACAAAAAAGATGACAAGCCATGTCTTGCTTGGGAGTGT
TGCATGGTAGCATTGTTATAATTTGGGAATTTTTTTTTTTTTTGGCCCAGTTTGTATCTG
CATTGAAGCTACCAGAGGCATTTTCCAGATTCATTGCAAACCAGATGGGAAAATAAGAAA
CCGAAAATTCTTTCTACCTGAAATAAACAGAGGTGGGGTTGAAGTCCAGGAAAACTCATC
TAATCCCTACATTGAGGGATGATGTACGCTAGAAAATAGGAAAAGAGGAAAGTGTTGTGT
TATCTTCTCTGTAATCTTTAACTTTAATTTAACTTAATATTACTGAAAATGTAAATGATG
GAAGTTCATAGAATTTTGATGGCAAGTTTCCTGTAAAAATTTGTATCGATTTGACTAAAA
TTCATTTTCGTTAGTCCGTCTTTGTTTTTCTGACTTGGACAGCTTTATGGAGTTTTAATG
AGCAAACTGACAAGTGAATCCAAGTCTGGGCATTTGCTATTTAGTATTGGAAAATGCATT
CGAAAATGTGGAGTAGAGAAATCGCGAATTTAAAAATGTTGCTGCCCAGGATCGAACTGG
GGACCTTTAGTGTGTAAGACTAACGTGATAACCACTACACCACAGCAACTTGTTC