Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g05350.1
CDS Infomation

gene=Cs2g05350
Sequence

ATGGAAGACAAGAAACTTCACATAGCCATGTATCCATGGTTCGCCATGGGCCATCTGACC
TCATATCTCCATATTTCCAACAAACTTGCAGAAAGAGGCCACAAGATCTCATTTATCTTA
CCAACGAACACACATACAAAATTTGAGCCCTTTAATCTTCACAAACATCTCGTTACTTTC
ATTCCAATCACCGTCCCTTGTGTTGATGGTCTTCCTTCCGGAACCGAAACAACAACAGAT
GTTCCTTTCCCATTGCATCCGCTCCTCATGACTGCCATGGATCTGACTGAGCCCGCCATT
GAAGCTATTGTTCGTGACATAAAACCCAACATTGTCTTCTTTGATTTCACTTACTGGCTT
CCTTCATTGGCTCGTAAGCTAGGCATTAAGTCCATCGCTTTTGTCACCATTAGTCCTGCC
ACCGTTGGCTATCTGTTGAGCCCGGAAAGAAAGCTTCGTGATAAAGTCTTGACAGAAGCT
GACTTGTTGCAGCCTCCGCAAGGTTTCCCTCCTTCAAAGATCAAGTTACGTGCCCATGAA
GCTAGAGGACTAGCTGCTGCAACTGTTAAAGACTTTGGTGGCCTTTCGTTCATGGAGCGA
TTATTACTCTGTTTAACCGAGTGTGATGCGATTGGTTTCAAAACGTGCAGGGAGATTGAA
GGTGCTTATTGTGATTACGTTGAGAGCCAGTTCGAAAAGCGAGTGATTTTGGCAGGGCCA
GTGTTGCCGGAGCCTCCTGCTTCTGTTTTAGAAGAGGAGTTCGAAATGTTGTTCAGCAGC
TTTAAAGCGAAAAGCTTAATATTCTGTGCACTTGGGAGTGAATGTGTTCTCAAGAAGGAC
CAGTTCCAAGAACTGATCTTAGGTTTTGAGCTTACAGGTCTCCCCTTTTTCGCTGCCCTG
AAACCACCGACGGGACATGATACAATAGAGTCAGCACTCCCTGAAGGATTCGAAGACAGA
GTCAAAGGAAGAGGATTTGTTCATGGAGGTTGGGTTCAGCAACAGTTGATCTTGAAACAT
CCCTCTGTTGGGTGTTTTGTGACCCACTGTGGATCAGGATCACTGTCAGAGGCTATGGTC
AATGAGTGCCAATTAGTGCTGCTCCCAAATGTTGGTGACCAAATTATAAATTCAAGACTG
ATGGGTGAAGATCTGAAAGTTGGAGTGGAAGTTGAGAGAGGCGATGAAGATGGATTATTT
ACAAGAGATGGTGTATGCAAGGCTGTGAAGGCTGTGATGGATGATGATAGTGAAGTGGGC
AAGGATGCAAGGCAAAATCATGCTGAACTGAGAGAGTTCTTAATCAGCCCAGGGCTTGAG
AATTCTTATGTTGATGGTTTTGTTCAGGAATTGCATAGCCTGGCTGATCTCATGTGA

Peptide Sequence

PEP ID

Cs2g05350.1
PEP Infomation
Sequence

MEDKKLHIAMYPWFAMGHLTSYLHISNKLAERGHKISFILPTNTHTKFEPFNLHKHLVTF
IPITVPCVDGLPSGTETTTDVPFPLHPLLMTAMDLTEPAIEAIVRDIKPNIVFFDFTYWL
PSLARKLGIKSIAFVTISPATVGYLLSPERKLRDKVLTEADLLQPPQGFPPSKIKLRAHE
ARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDYVESQFEKRVILAGP
VLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAAL
KPPTGHDTIESALPEGFEDRVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMV
NECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVG
KDARQNHAELREFLISPGLENSYVDGFVQELHSLADLM*

Transcript Sequence

Transcript ID

Cs2g05350.1
Transcript Infomation

gene=Cs2g05350 CDS=466-1842
Sequence

TTTAAACCTTAACTATAATCACAGTTCACAAGAGAGATGCTATAATGGAAGACAAGAAAC
TTCACACAGCCATGTATCCATGGTTCGCCACGGGCCATCTGACCTCATATCTCCATATCT
CCAACAAACTTGCAGAAAGAGGCCACAAGATCTCATTTATCTTACCAACAAACACACAGA
CAAAATTTGAGCCCTTTAATCTTCACAAACATCTCATTACTTTCACAAATAATGAAATCA
ATTCCAGACCGTTCATCAATCTAAAACCAACAATTATTTTCTTTGATCTACATTAAAGAT
AACAAGAGATTGCGTGGAGAATGTTTTGACACGTGCGTGCTTTCTCGCTGGCTGGTGCAA
TTATTGTGAAGAGTTCTGATATTTGCAAACATCATTTTCCTTACATATACAGTACATATA
TTTTAAACCTGAACTATAATCACAGTTCACAAGAGAGATGCTATAATGGAAGACAAGAAA
CTTCACATAGCCATGTATCCATGGTTCGCCATGGGCCATCTGACCTCATATCTCCATATT
TCCAACAAACTTGCAGAAAGAGGCCACAAGATCTCATTTATCTTACCAACGAACACACAT
ACAAAATTTGAGCCCTTTAATCTTCACAAACATCTCGTTACTTTCATTCCAATCACCGTC
CCTTGTGTTGATGGTCTTCCTTCCGGAACCGAAACAACAACAGATGTTCCTTTCCCATTG
CATCCGCTCCTCATGACTGCCATGGATCTGACTGAGCCCGCCATTGAAGCTATTGTTCGT
GACATAAAACCCAACATTGTCTTCTTTGATTTCACTTACTGGCTTCCTTCATTGGCTCGT
AAGCTAGGCATTAAGTCCATCGCTTTTGTCACCATTAGTCCTGCCACCGTTGGCTATCTG
TTGAGCCCGGAAAGAAAGCTTCGTGATAAAGTCTTGACAGAAGCTGACTTGTTGCAGCCT
CCGCAAGGTTTCCCTCCTTCAAAGATCAAGTTACGTGCCCATGAAGCTAGAGGACTAGCT
GCTGCAACTGTTAAAGACTTTGGTGGCCTTTCGTTCATGGAGCGATTATTACTCTGTTTA
ACCGAGTGTGATGCGATTGGTTTCAAAACGTGCAGGGAGATTGAAGGTGCTTATTGTGAT
TACGTTGAGAGCCAGTTCGAAAAGCGAGTGATTTTGGCAGGGCCAGTGTTGCCGGAGCCT
CCTGCTTCTGTTTTAGAAGAGGAGTTCGAAATGTTGTTCAGCAGCTTTAAAGCGAAAAGC
TTAATATTCTGTGCACTTGGGAGTGAATGTGTTCTCAAGAAGGACCAGTTCCAAGAACTG
ATCTTAGGTTTTGAGCTTACAGGTCTCCCCTTTTTCGCTGCCCTGAAACCACCGACGGGA
CATGATACAATAGAGTCAGCACTCCCTGAAGGATTCGAAGACAGAGTCAAAGGAAGAGGA
TTTGTTCATGGAGGTTGGGTTCAGCAACAGTTGATCTTGAAACATCCCTCTGTTGGGTGT
TTTGTGACCCACTGTGGATCAGGATCACTGTCAGAGGCTATGGTCAATGAGTGCCAATTA
GTGCTGCTCCCAAATGTTGGTGACCAAATTATAAATTCAAGACTGATGGGTGAAGATCTG
AAAGTTGGAGTGGAAGTTGAGAGAGGCGATGAAGATGGATTATTTACAAGAGATGGTGTA
TGCAAGGCTGTGAAGGCTGTGATGGATGATGATAGTGAAGTGGGCAAGGATGCAAGGCAA
AATCATGCTGAACTGAGAGAGTTCTTAATCAGCCCAGGGCTTGAGAATTCTTATGTTGAT
GGTTTTGTTCAGGAATTGCATAGCCTGGCTGATCTCATGTGATTTCAGTTTAAAGAAATT
TTTTAGCAAGTTGGTGCCTTCTCCTTAGCCTATAGTGCGGTCATCTTTGTTAAATGCCTA
GCTATTCATACCACATTAATAAAAGTTTGTTAACAGAATCATGTTCCAAATAATTTCTTC
TTGTATTTAATGTTCTTATGTTTAACATTACCTTAACGGTTCTTGCTTTTCACATATATA
CAATATCAG