Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g04450.1
CDS Infomation

gene=Cs2g04450
Sequence

ATGAATATCTTCAGATTCGCCGGTGACATGACTCACTTGATCAGTATTTTAGTACTGCTT
CTCAAAATCTACGCTACCAAATCTTGCTCAGGGATTTCGTTGAAAACTCAAGAGCTCTAC
GCACTGGTCTTTTTGACGCGGTACTTGGATCTCTTCACAGACTTCATCTCTGTTTACAAC
ACTGTGATGAAGCTAGTATTCATTGCTAGTTCTCTTGCGATTGTTTGGTGCATGAGGATG
CACCGAGCTGTTCGTCGTACTTACGACAAAGAGCTTGACACATTTCGCCATTACTTCCTC
ATTGCGGCATGCTTTGTGCTGTCTCTGATTTTGAATGAGAAGTTCACATTTCAAGAGATC
TTCTGGGCATTTTCTATATACTTGGAGGCGGTTGCGATTCTTCCCCAGTTAGTCTTATTA
CAGAGAAGCGGAAATGTTGACAATTTAACGGGGCAATATGTGTTCTTTCTTGGAGCATAT
CGTGCCTTCTACATTCTCAACTGGATCTACCGCTATATCACGGAACCACATTTTAGTCGA
TGGATTGCTTGCGTCTCTGGCATTGTCCAGACAGCTCTTTATGCAGATTTCTTCTATTAC
TACTTCATCAGCGTTAAGATCGTGAGACTGCTTCAAAACAAGGGTTTTATAATATTTCAA
CGTTCAACCCTCGATCCTCCATCTTGCATCGTTGGAGTTGGTGTTGCCACTGATTCCGAG
CCTCTGATCAAAGTCAAAGCTTGTCGATCTATTCAGATCTGCTCATTTTTGAAAATGGGA
GGAGGATTTAGAGTGCTGCATTTGGTGAGACCATTTCTTCCATTTTTGCCGGAGGTTCAG
TCAGCTGACAGGAAAATTCCCTTCCGAGAGAAGGTGATCTACACTGTCATTTCGCTTTTC
ATCTTTCTGGTATGCAGTCAGCTTCCACTTTATGGCATCCATTCCACCACCGGTGCTGAT
CCCTTTTATTGGATGCGTGTTATTCTTGCATCAAACCGGGGAACTGTGATGGAACTTGGG
ATTACCCCCATTGTGACTTCTGGACTTGTGATGCAACTCTTGGCTGGGTCCAAGATTATT
GAGGTGGATAACAATGTTCGTGAGGATCGTGCGCTCTTAAATGGGGCACAGAAGCTGTTG
GGCATCCTGATTGCTATCGGTGAGGCTGTTGCCTACGTGATGTCGGGGATGTATGGAAGT
GTCAGCCAGCTTGGTGCTGGGAATGCTATTCTCATAATCCTCCAACTTTGCTTTGCTGGA
ATCATTGTGATATGCCTGGATGAACTTCTGCAGAAGGGATATGGCTTGGGCTCTGGGATC
TCCCTTTTCATAGCCACTAACATTTGTGAAAGCATTATTTGGAAAGCTTTTAGCCCCACA
ACCATAAACAGTGGCCGGGGAGCTGAATTCGAGGGTGCTGTTATTGCTCTGTTTCATCTG
CTGATAACCAAGCAAAACAAAGTTGGGGCTCTTCGAGAGGCTTTCTATCGGCAAAACCTT
CCCAATATTACTAATTTGCTTGCTACAGTCCTCGTATTCCTTATTGTTGTCTACTTTCAA
GGTTTCAAAGTGGTGTTGCCCGTGAGATCAAAAAATGCCCGTGGGCAACAGGGTGCTTAT
CCAATTAAGCTATTCTACACATCCAACATGCCTATCATTCTCCAATCTGCACTTGTCTCA
AATCTGTATTTCATCTCTCAGTTGCTCTACAGGAAGTACAGTGGCAATTTCTTTGTTAAT
CTGTTAGGGAAGTGGAAGGAATCTGAATATTCTGGCCACTCTATTCCAGTTGGTGGCCTA
GCTTATTATGTCACTGCACCAGCAAGCTTGGCTGATATGGCAGCCAATCCTTTCCATGCT
CTGTTCTACCTGGTTTTTATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAA
GTTTCAGGGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTGATG
CCTGGACATAGAGACTCAAATCTTCAAAAGGAACTGAACCGGTACATACCAACTGCTGCT
GCCTTTGGCGGAGTGTGCATTGGTGCATTAACAGTCCTGGCTGATTTCATGGGAGCAATT
GGGTCAGGAACTGGGATATTGCTCGCAGTTACGATCATATATCAGTACTTTGAGACGTTT
GAGAAGGAGAGAGCTAGTGAACTTGGCTTCTTTGGCTTTTAA

Peptide Sequence

PEP ID

Cs2g04450.1
PEP Infomation
Sequence

MNIFRFAGDMTHLISILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYN
TVMKLVFIASSLAIVWCMRMHRAVRRTYDKELDTFRHYFLIAACFVLSLILNEKFTFQEI
FWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNWIYRYITEPHFSR
WIACVSGIVQTALYADFFYYYFISVKIVRLLQNKGFIIFQRSTLDPPSCIVGVGVATDSE
PLIKVKACRSIQICSFLKMGGGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLF
IFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKII
EVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAG
IIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHL
LITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAY
PIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGL
AYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVM
PGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETF
EKERASELGFFGF*

Transcript Sequence

Transcript ID

Cs2g04450.1
Transcript Infomation

gene=Cs2g04450 CDS=1-2202
Sequence

ATGAATATCTTCAGATTCGCCGGTGACATGACTCACTTGATCAGTATTTTAGTACTGCTT
CTCAAAATCTACGCTACCAAATCTTGCTCAGGGATTTCGTTGAAAACTCAAGAGCTCTAC
GCACTGGTCTTTTTGACGCGGTACTTGGATCTCTTCACAGACTTCATCTCTGTTTACAAC
ACTGTGATGAAGCTAGTATTCATTGCTAGTTCTCTTGCGATTGTTTGGTGCATGAGGATG
CACCGAGCTGTTCGTCGTACTTACGACAAAGAGCTTGACACATTTCGCCATTACTTCCTC
ATTGCGGCATGCTTTGTGCTGTCTCTGATTTTGAATGAGAAGTTCACATTTCAAGAGATC
TTCTGGGCATTTTCTATATACTTGGAGGCGGTTGCGATTCTTCCCCAGTTAGTCTTATTA
CAGAGAAGCGGAAATGTTGACAATTTAACGGGGCAATATGTGTTCTTTCTTGGAGCATAT
CGTGCCTTCTACATTCTCAACTGGATCTACCGCTATATCACGGAACCACATTTTAGTCGA
TGGATTGCTTGCGTCTCTGGCATTGTCCAGACAGCTCTTTATGCAGATTTCTTCTATTAC
TACTTCATCAGCGTTAAGATCGTGAGACTGCTTCAAAACAAGGGTTTTATAATATTTCAA
CGTTCAACCCTCGATCCTCCATCTTGCATCGTTGGAGTTGGTGTTGCCACTGATTCCGAG
CCTCTGATCAAAGTCAAAGCTTGTCGATCTATTCAGATCTGCTCATTTTTGAAAATGGGA
GGAGGATTTAGAGTGCTGCATTTGGTGAGACCATTTCTTCCATTTTTGCCGGAGGTTCAG
TCAGCTGACAGGAAAATTCCCTTCCGAGAGAAGGTGATCTACACTGTCATTTCGCTTTTC
ATCTTTCTGGTATGCAGTCAGCTTCCACTTTATGGCATCCATTCCACCACCGGTGCTGAT
CCCTTTTATTGGATGCGTGTTATTCTTGCATCAAACCGGGGAACTGTGATGGAACTTGGG
ATTACCCCCATTGTGACTTCTGGACTTGTGATGCAACTCTTGGCTGGGTCCAAGATTATT
GAGGTGGATAACAATGTTCGTGAGGATCGTGCGCTCTTAAATGGGGCACAGAAGCTGTTG
GGCATCCTGATTGCTATCGGTGAGGCTGTTGCCTACGTGATGTCGGGGATGTATGGAAGT
GTCAGCCAGCTTGGTGCTGGGAATGCTATTCTCATAATCCTCCAACTTTGCTTTGCTGGA
ATCATTGTGATATGCCTGGATGAACTTCTGCAGAAGGGATATGGCTTGGGCTCTGGGATC
TCCCTTTTCATAGCCACTAACATTTGTGAAAGCATTATTTGGAAAGCTTTTAGCCCCACA
ACCATAAACAGTGGCCGGGGAGCTGAATTCGAGGGTGCTGTTATTGCTCTGTTTCATCTG
CTGATAACCAAGCAAAACAAAGTTGGGGCTCTTCGAGAGGCTTTCTATCGGCAAAACCTT
CCCAATATTACTAATTTGCTTGCTACAGTCCTCGTATTCCTTATTGTTGTCTACTTTCAA
GGTTTCAAAGTGGTGTTGCCCGTGAGATCAAAAAATGCCCGTGGGCAACAGGGTGCTTAT
CCAATTAAGCTATTCTACACATCCAACATGCCTATCATTCTCCAATCTGCACTTGTCTCA
AATCTGTATTTCATCTCTCAGTTGCTCTACAGGAAGTACAGTGGCAATTTCTTTGTTAAT
CTGTTAGGGAAGTGGAAGGAATCTGAATATTCTGGCCACTCTATTCCAGTTGGTGGCCTA
GCTTATTATGTCACTGCACCAGCAAGCTTGGCTGATATGGCAGCCAATCCTTTCCATGCT
CTGTTCTACCTGGTTTTTATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAA
GTTTCAGGGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTGATG
CCTGGACATAGAGACTCAAATCTTCAAAAGGAACTGAACCGGTACATACCAACTGCTGCT
GCCTTTGGCGGAGTGTGCATTGGTGCATTAACAGTCCTGGCTGATTTCATGGGAGCAATT
GGGTCAGGAACTGGGATATTGCTCGCAGTTACGATCATATATCAGTACTTTGAGACGTTT
GAGAAGGAGAGAGCTAGTGAACTTGGCTTCTTTGGCTTTTAA