Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	Cs2g04380.1
CDS Infomation	gene=Cs2g04380
Sequence	ATGGTGGCCAAAATGGGCAAGAGAACCCCAACAAAGACTTTCAAGCATCAACGGCGCCAC CACCACCGCAAGAAGTCTCCGGCGAAGACCGCCTCCGCCGCCACCATCATCTCCTCCATT AACAAGTCTTTGCACACATGCAAGCGTCGCCTCGCCAGGATTTTCTCCAAATTGGTACGC ATCACCACCCCGTCAAGATGCAAGACCAAAGGCTACAAAATCCTGAGATCCCAAGATAAA GATTCAAATTCAAATGGCGAAGATCAACTTCTTGTTCCGCAAGTACTTTTCTTTGGCAAT GAACATCTGTTGCCTCCTCTGATCTCCCCCGATAAGAAGACAATTTTTCTTGATCTTGAT GAGACCTTGATTCACTCCAAGCCTGACCCTCCTCCCGAAAGATTTGATTTCATTGTTAGG CCGAGGATTGACGGAGAAGTTTTGAACTTTTATGTGTTGAAACGGCCCGGCGTTGATGCT TTTTTGGATGCAATAAGCAAGAAGTACGAGGTGGTCGTGTTCACAGCCGGGTTAAAAGAG TATGCTTCTTTGCTTCTTAATAGGCTCGACAGGAATGGGGTGATTTCGCACCGCCTTTAT CGTGACTCTTGCAAGCAGATTGATGGCAAGTTTGTGAAGGACTTATCCGAGATGGGGAGG AACTTGAAGCAAGTTGTCATTGTCGATGATAATCCTAATGCTTACATATTTCAGCCGGAA AATGCCATTCCGGTGAAGCCCTTCACCGGTGATCCTAGCGATATTGAGTTGTGGAAGTTG GTCAATTTTTTTGAGGCTTGTGATTGTTTTGTTGACATGAGGGACGCTGTGAAGGCGTTT GATCTTGGCGAAAGGATGGAGGGCAAGACAGTTAATCCCAAACCCGATGCGGAAGAAATC GGAGCTCCGGCGTCCAGTCGTCGTATTCCTTCTTCTCCGCCGGATGATATGGGATTAGAA AATTCTCGAGCGAGCTGTAACTCAATGTCTGCTGTTGAGTTTGAGAGCCAAAGAATGGTT GGTTCTAAAGAATATGATACTGAGTTGCCAACACAATTTAATGAGGAGAATGGCAAGAAG AGGGAATTACAACCTAGCAGTCCAAGGAAAGGAAAATACTTCTTTTACGACTCGCCGCAT TACGAAGATACTGGGGTATGGATACCTGTATCTGTTCCACCTATGTTGGACAGCAAGGAT GATGAGTGGGCAAGAGGATTTCATTCCGATGGGGGTTACTTCCCTGAAGTTGACATGGGT TGGAGCCAATACCTTAAGGAAGATAAGGAGTTGACCATGTGGGATGTGGTAGTGGAAATG TTACTTGCAGCTCGTGGAAAAGTGCACGCTTTAGCCAAAGGTGATATTCACGGATGTAAT TTTTCATGGATGTCAAGCCATTTACTTGAACAAGCTTGGCAAGAGATGGCTCAAACTCTC ACTGAAGCTAATTTTGGAAATGTGAGCGAACTTCTTGATGCTGAACCACCGAGATGGTTG GCTGATAGTTCTGCTTCTGCTTGTATGTTATGTGGTGTGCGGTTTCATCCAATCATGTGC TCTAGGCATCACTGCCGCTTTTGTGGAGGAATATTTTGTGGTGAGTGTTCTAAAGGAAGG AGCTTGCTGCCTGTAAAGTTTCGAGTTTCAGATCCACAACGAGTTTGTGATGTGTGCTGT GTGCGGCTTCAGTCTGTCCAACCATACCTAATGAACCAAGTAAGTCATGCTGCTCAGTTA CCAACCCGTGACCTGACAGACCTCAGCACATTGAGATCCTGGGTCAATTTTCCATGGGGA CAGTCCATGGAGTACGAGATTTACAAGGCAGCAAATACTATACGGGGTTACAGTAAGGTT GGTTTTCTAAAACCTGAAAAATCAATACCAGATATCATTCTACGACAGGCAAAGGGCCTT GCCATATTATCAGTTGCAAAAGTTGGTGTGATGGTTACCTACAATATTGGAACGGGTCTT GTAATTGCTCGTAGAAATGATGGCTCATGGTCTCCGCCTTCTGCTATTTCTTCATTTGGT ATGGGATGGGGAGCTCAGGCTGGAGGAGAATTGACCGACTTCATAATCGTTTTGAGAACA AATGACGCTGTCAAGACATTTACTGGTAATGCGCACATCTCGATTGGAGCTGGCTTGAGT GCAGCAGTTGGCACCGTTGGACGAGTAGTTGAAGCTGGTGTACGGGCTGGTGATGGTGGT TATGCTGCTTGTTATACGTACAGCTGCAGTAAAGGTGCTTTCGTTGGATGCTCTCTGGAA GGAAGTGTTTTCACTACCCGCACACAAGAGAATTCCCGATTTTATGGCAGCCAGTCAGTA ACTGCATCAGATGTACTTCTTGGCTCAATGCCTATTCCACCTGCAGCTGCCATGCTTTAC CATGCACTCGAAGATCTATATCAGAAGCTGCAGAGGTGA

Peptide Sequence

PEP ID	Cs2g04380.1
PEP Infomation
Sequence	MVAKMGKRTPTKTFKHQRRHHHRKKSPAKTASAATIISSINKSLHTCKRRLARIFSKLVR ITTPSRCKTKGYKILRSQDKDSNSNGEDQLLVPQVLFFGNEHLLPPLISPDKKTIFLDLD ETLIHSKPDPPPERFDFIVRPRIDGEVLNFYVLKRPGVDAFLDAISKKYEVVVFTAGLKE YASLLLNRLDRNGVISHRLYRDSCKQIDGKFVKDLSEMGRNLKQVVIVDDNPNAYIFQPE NAIPVKPFTGDPSDIELWKLVNFFEACDCFVDMRDAVKAFDLGERMEGKTVNPKPDAEEI GAPASSRRIPSSPPDDMGLENSRASCNSMSAVEFESQRMVGSKEYDTELPTQFNEENGKK RELQPSSPRKGKYFFYDSPHYEDTGVWIPVSVPPMLDSKDDEWARGFHSDGGYFPEVDMG WSQYLKEDKELTMWDVVVEMLLAARGKVHALAKGDIHGCNFSWMSSHLLEQAWQEMAQTL TEANFGNVSELLDAEPPRWLADSSASACMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGR SLLPVKFRVSDPQRVCDVCCVRLQSVQPYLMNQVSHAAQLPTRDLTDLSTLRSWVNFPWG QSMEYEIYKAANTIRGYSKVGFLKPEKSIPDIILRQAKGLAILSVAKVGVMVTYNIGTGL VIARRNDGSWSPPSAISSFGMGWGAQAGGELTDFIIVLRTNDAVKTFTGNAHISIGAGLS AAVGTVGRVVEAGVRAGDGGYAACYTYSCSKGAFVGCSLEGSVFTTRTQENSRFYGSQSV TASDVLLGSMPIPPAAAMLYHALEDLYQKLQR*

Transcript Sequence

Transcript ID	Cs2g04380.1
Transcript Infomation	gene=Cs2g04380 CDS=1-2439
Sequence	ATGGTGGCCAAAATGGGCAAGAGAACCCCAACAAAGACTTTCAAGCATCAACGGCGCCAC CACCACCGCAAGAAGTCTCCGGCGAAGACCGCCTCCGCCGCCACCATCATCTCCTCCATT AACAAGTCTTTGCACACATGCAAGCGTCGCCTCGCCAGGATTTTCTCCAAATTGGTACGC ATCACCACCCCGTCAAGATGCAAGACCAAAGGCTACAAAATCCTGAGATCCCAAGATAAA GATTCAAATTCAAATGGCGAAGATCAACTTCTTGTTCCGCAAGTACTTTTCTTTGGCAAT GAACATCTGTTGCCTCCTCTGATCTCCCCCGATAAGAAGACAATTTTTCTTGATCTTGAT GAGACCTTGATTCACTCCAAGCCTGACCCTCCTCCCGAAAGATTTGATTTCATTGTTAGG CCGAGGATTGACGGAGAAGTTTTGAACTTTTATGTGTTGAAACGGCCCGGCGTTGATGCT TTTTTGGATGCAATAAGCAAGAAGTACGAGGTGGTCGTGTTCACAGCCGGGTTAAAAGAG TATGCTTCTTTGCTTCTTAATAGGCTCGACAGGAATGGGGTGATTTCGCACCGCCTTTAT CGTGACTCTTGCAAGCAGATTGATGGCAAGTTTGTGAAGGACTTATCCGAGATGGGGAGG AACTTGAAGCAAGTTGTCATTGTCGATGATAATCCTAATGCTTACATATTTCAGCCGGAA AATGCCATTCCGGTGAAGCCCTTCACCGGTGATCCTAGCGATATTGAGTTGTGGAAGTTG GTCAATTTTTTTGAGGCTTGTGATTGTTTTGTTGACATGAGGGACGCTGTGAAGGCGTTT GATCTTGGCGAAAGGATGGAGGGCAAGACAGTTAATCCCAAACCCGATGCGGAAGAAATC GGAGCTCCGGCGTCCAGTCGTCGTATTCCTTCTTCTCCGCCGGATGATATGGGATTAGAA AATTCTCGAGCGAGCTGTAACTCAATGTCTGCTGTTGAGTTTGAGAGCCAAAGAATGGTT GGTTCTAAAGAATATGATACTGAGTTGCCAACACAATTTAATGAGGAGAATGGCAAGAAG AGGGAATTACAACCTAGCAGTCCAAGGAAAGGAAAATACTTCTTTTACGACTCGCCGCAT TACGAAGATACTGGGGTATGGATACCTGTATCTGTTCCACCTATGTTGGACAGCAAGGAT GATGAGTGGGCAAGAGGATTTCATTCCGATGGGGGTTACTTCCCTGAAGTTGACATGGGT TGGAGCCAATACCTTAAGGAAGATAAGGAGTTGACCATGTGGGATGTGGTAGTGGAAATG TTACTTGCAGCTCGTGGAAAAGTGCACGCTTTAGCCAAAGGTGATATTCACGGATGTAAT TTTTCATGGATGTCAAGCCATTTACTTGAACAAGCTTGGCAAGAGATGGCTCAAACTCTC ACTGAAGCTAATTTTGGAAATGTGAGCGAACTTCTTGATGCTGAACCACCGAGATGGTTG GCTGATAGTTCTGCTTCTGCTTGTATGTTATGTGGTGTGCGGTTTCATCCAATCATGTGC TCTAGGCATCACTGCCGCTTTTGTGGAGGAATATTTTGTGGTGAGTGTTCTAAAGGAAGG AGCTTGCTGCCTGTAAAGTTTCGAGTTTCAGATCCACAACGAGTTTGTGATGTGTGCTGT GTGCGGCTTCAGTCTGTCCAACCATACCTAATGAACCAAGTAAGTCATGCTGCTCAGTTA CCAACCCGTGACCTGACAGACCTCAGCACATTGAGATCCTGGGTCAATTTTCCATGGGGA CAGTCCATGGAGTACGAGATTTACAAGGCAGCAAATACTATACGGGGTTACAGTAAGGTT GGTTTTCTAAAACCTGAAAAATCAATACCAGATATCATTCTACGACAGGCAAAGGGCCTT GCCATATTATCAGTTGCAAAAGTTGGTGTGATGGTTACCTACAATATTGGAACGGGTCTT GTAATTGCTCGTAGAAATGATGGCTCATGGTCTCCGCCTTCTGCTATTTCTTCATTTGGT ATGGGATGGGGAGCTCAGGCTGGAGGAGAATTGACCGACTTCATAATCGTTTTGAGAACA AATGACGCTGTCAAGACATTTACTGGTAATGCGCACATCTCGATTGGAGCTGGCTTGAGT GCAGCAGTTGGCACCGTTGGACGAGTAGTTGAAGCTGGTGTACGGGCTGGTGATGGTGGT TATGCTGCTTGTTATACGTACAGCTGCAGTAAAGGTGCTTTCGTTGGATGCTCTCTGGAA GGAAGTGTTTTCACTACCCGCACACAAGAGAATTCCCGATTTTATGGCAGCCAGTCAGTA ACTGCATCAGATGTACTTCTTGGCTCAATGCCTATTCCACCTGCAGCTGCCATGCTTTAC CATGCACTCGAAGATCTATATCAGAAGCTGCAGAGGTGA