Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs2g02620.1
CDS Infomation

gene=Cs2g02620
Sequence

ATGGCAAATAAGGCTAATATATCAGCTAATTCATCAAGCTGCGCAGCTCTTCTCGTCTTA
GCCATCAGTTTTATTGGTTGCTTTGCGGAAGAGCGAGATATATATTTGGTCTTAATAGAA
GGGGAACCACTTGCATTCCATGGCAGTGATGATAAAAGAAGATTCGATCTGAACAGTGAT
GCTTACAAGGGTCAGACAAAGCGGCTGATGGATTCTCATGACCGGATTCTACAAAGCACT
TTAGAAATCGGAAGCTACAACAAACTATACAGCTTTAAATACACTGTTAATGGGTTTGCA
GTCCATCTTACACCTACTCAGGCCAAGAAACTTGAAAATGCTCCCCAAGTGAAGTTGGTA
GAGAGAGATAGAAGAGCCAAATTGATGACAAGCTACACTCCTCAATTTCTTGGATTACCA
CAAGGAGTGTGGACGCAAAGAGGAGGAGACAAGAATGCAGGTGAAGGGATAGTGATTGGT
TTTGTTGACACAGGCATCAACCCTTCACATCCAAGCTTCGCTAATTACAATCCGTTTGAG
CCGAATATTTCTCATTTTTCCGGCGACTGTGAGACTGGTCCTCGATTTCCTCTGAGCTCT
TGCAACGGAAAAATTGTTTCAGCTAGGTTTTTCTCTGCTGGGGCTCAAGCTGTTGCTACT
CTTAACACTTCTGTCGACTTTCTTTCGCCGTTTGATGCTGTTGGACATGGCAGCCATGTA
GCATCAACTGCTGCTGGAAACGCTGGTGTTCCGGTGGTCGTCGATGGCTTCTTTTATGGG
CTAGCCAGTGGGATGGCGCCATGTGCACGAATTGCTGTTTATAAGGCAATGTATCCAACA
GTGGGAACTCTTGCAGATGTGATTGCGGCTATTGATCAAGCAACAATGGATGGAGTGGAT
ATCTTAACACTGTCCATTGGACCAGATGAGCCACCAAGAGATACGATCACCATGTTAGGT
ATTTTCGATGTCTTGATGCTCTTTGCAAGACGAGCCGGAGTTTTCGTGGTGCAAGCTGCT
GGAAATCAGGGGCCAGCTCCATCGACTGTAGTGTCTTACAGCCCTTGGGCCGTAGCTGCT
GCTGCTTGCACTACTGACCGAATTTATCCCGGTTCCCTCCTCCTCGGGAATGGCCTAAAA
CTTGGTGGTGTAGGATTGTCAGGGCCAACTTGTGGAAGACCGCTATTTCTTTCAAAGCTA
GTATTGGCCAGGGATGTAATATTGAGGGTAAATGGGACATTTCCAAGGACTCCACAGTAC
ATTGAAGAGTGCCAGTATCCGGAAGCATTTGAGCCCAGTCTTGTGCAAGGCAGCGTCGTC
ATTTGCACTTTCTCGGATGGCTTCTATAACCAGACTTCAACACTCACTGCTGTCATCAAC
ACCGCAATAACTCTTGGATTCATGGGTTTTATTCTAATCGCAAACTCACATTATGGTGAT
TTTGTAGCGGAGCCAATTCCCTTCGCTGTTCCTGGCATTTTGATCCCAAAAGTCTCAACT
TCAGAGATTATTCTGCAGTACTATGAGCAGCAAACCCACAGGGATGAGAGGGGAGTTGCA
ATTAAATTCAATGCGCAAGCCGGCATAGGAGAGGGTAGAGTTGCCTCATTTGAGGGCCGG
GCACCCATTGTTAGCAGATTCTCTTCAAGAGGGCCAGATTTTACAGACCTTAGCAGGAAT
CCTACTGACGTACTAAAGCCTGATGTGATCGCACCAGGGCACCAAATTTGGGCGGCCTGG
AGCCCCGTTAGCGCCTTAGATCCTATGCTAACAGGATGCAATTTTGCACTGTTGTCTGGT
ACAAGCATGGCAACACCACATATTGCGGGAATTGCAGCTCTGATCAAGCAGCATAATCCT
TCGTGGACACCGACAATGATTGCATCCGCCATCTCCTCCACTGCCACCAAGTATGATAAC
TATGGACAACTTATTATGGCAGAAGGATTTGAAATCACTAGCACATACAACTCCACTCAT
TTTGATTTCGGCTCCGGCCTTGTCAGTGCAACTCGTGCTCTTGATCCAGGCCTTGTTTTA
TCAAATTTGAAGACTACATCAGTTTCTTGTGCTCTTTGGCTGACTCTGACCCTGTTTCAA
TCAAGGCGGCTACTGGAATATGGTGCAATCATTCACTTAGCCACCCAGCGAACCTGA

Peptide Sequence

PEP ID

Cs2g02620.1
PEP Infomation
Sequence

MANKANISANSSSCAALLVLAISFIGCFAEERDIYLVLIEGEPLAFHGSDDKRRFDLNSD
AYKGQTKRLMDSHDRILQSTLEIGSYNKLYSFKYTVNGFAVHLTPTQAKKLENAPQVKLV
ERDRRAKLMTSYTPQFLGLPQGVWTQRGGDKNAGEGIVIGFVDTGINPSHPSFANYNPFE
PNISHFSGDCETGPRFPLSSCNGKIVSARFFSAGAQAVATLNTSVDFLSPFDAVGHGSHV
ASTAAGNAGVPVVVDGFFYGLASGMAPCARIAVYKAMYPTVGTLADVIAAIDQATMDGVD
ILTLSIGPDEPPRDTITMLGIFDVLMLFARRAGVFVVQAAGNQGPAPSTVVSYSPWAVAA
AACTTDRIYPGSLLLGNGLKLGGVGLSGPTCGRPLFLSKLVLARDVILRVNGTFPRTPQY
IEECQYPEAFEPSLVQGSVVICTFSDGFYNQTSTLTAVINTAITLGFMGFILIANSHYGD
FVAEPIPFAVPGILIPKVSTSEIILQYYEQQTHRDERGVAIKFNAQAGIGEGRVASFEGR
APIVSRFSSRGPDFTDLSRNPTDVLKPDVIAPGHQIWAAWSPVSALDPMLTGCNFALLSG
TSMATPHIAGIAALIKQHNPSWTPTMIASAISSTATKYDNYGQLIMAEGFEITSTYNSTH
FDFGSGLVSATRALDPGLVLSNLKTTSVSCALWLTLTLFQSRRLLEYGAIIHLATQRT*

Transcript Sequence

Transcript ID

Cs2g02620.1
Transcript Infomation

gene=Cs2g02620 CDS=1-2157
Sequence

ATGGCAAATAAGGCTAATATATCAGCTAATTCATCAAGCTGCGCAGCTCTTCTCGTCTTA
GCCATCAGTTTTATTGGTTGCTTTGCGGAAGAGCGAGATATATATTTGGTCTTAATAGAA
GGGGAACCACTTGCATTCCATGGCAGTGATGATAAAAGAAGATTCGATCTGAACAGTGAT
GCTTACAAGGGTCAGACAAAGCGGCTGATGGATTCTCATGACCGGATTCTACAAAGCACT
TTAGAAATCGGAAGCTACAACAAACTATACAGCTTTAAATACACTGTTAATGGGTTTGCA
GTCCATCTTACACCTACTCAGGCCAAGAAACTTGAAAATGCTCCCCAAGTGAAGTTGGTA
GAGAGAGATAGAAGAGCCAAATTGATGACAAGCTACACTCCTCAATTTCTTGGATTACCA
CAAGGAGTGTGGACGCAAAGAGGAGGAGACAAGAATGCAGGTGAAGGGATAGTGATTGGT
TTTGTTGACACAGGCATCAACCCTTCACATCCAAGCTTCGCTAATTACAATCCGTTTGAG
CCGAATATTTCTCATTTTTCCGGCGACTGTGAGACTGGTCCTCGATTTCCTCTGAGCTCT
TGCAACGGAAAAATTGTTTCAGCTAGGTTTTTCTCTGCTGGGGCTCAAGCTGTTGCTACT
CTTAACACTTCTGTCGACTTTCTTTCGCCGTTTGATGCTGTTGGACATGGCAGCCATGTA
GCATCAACTGCTGCTGGAAACGCTGGTGTTCCGGTGGTCGTCGATGGCTTCTTTTATGGG
CTAGCCAGTGGGATGGCGCCATGTGCACGAATTGCTGTTTATAAGGCAATGTATCCAACA
GTGGGAACTCTTGCAGATGTGATTGCGGCTATTGATCAAGCAACAATGGATGGAGTGGAT
ATCTTAACACTGTCCATTGGACCAGATGAGCCACCAAGAGATACGATCACCATGTTAGGT
ATTTTCGATGTCTTGATGCTCTTTGCAAGACGAGCCGGAGTTTTCGTGGTGCAAGCTGCT
GGAAATCAGGGGCCAGCTCCATCGACTGTAGTGTCTTACAGCCCTTGGGCCGTAGCTGCT
GCTGCTTGCACTACTGACCGAATTTATCCCGGTTCCCTCCTCCTCGGGAATGGCCTAAAA
CTTGGTGGTGTAGGATTGTCAGGGCCAACTTGTGGAAGACCGCTATTTCTTTCAAAGCTA
GTATTGGCCAGGGATGTAATATTGAGGGTAAATGGGACATTTCCAAGGACTCCACAGTAC
ATTGAAGAGTGCCAGTATCCGGAAGCATTTGAGCCCAGTCTTGTGCAAGGCAGCGTCGTC
ATTTGCACTTTCTCGGATGGCTTCTATAACCAGACTTCAACACTCACTGCTGTCATCAAC
ACCGCAATAACTCTTGGATTCATGGGTTTTATTCTAATCGCAAACTCACATTATGGTGAT
TTTGTAGCGGAGCCAATTCCCTTCGCTGTTCCTGGCATTTTGATCCCAAAAGTCTCAACT
TCAGAGATTATTCTGCAGTACTATGAGCAGCAAACCCACAGGGATGAGAGGGGAGTTGCA
ATTAAATTCAATGCGCAAGCCGGCATAGGAGAGGGTAGAGTTGCCTCATTTGAGGGCCGG
GCACCCATTGTTAGCAGATTCTCTTCAAGAGGGCCAGATTTTACAGACCTTAGCAGGAAT
CCTACTGACGTACTAAAGCCTGATGTGATCGCACCAGGGCACCAAATTTGGGCGGCCTGG
AGCCCCGTTAGCGCCTTAGATCCTATGCTAACAGGATGCAATTTTGCACTGTTGTCTGGT
ACAAGCATGGCAACACCACATATTGCGGGAATTGCAGCTCTGATCAAGCAGCATAATCCT
TCGTGGACACCGACAATGATTGCATCCGCCATCTCCTCCACTGCCACCAAGTATGATAAC
TATGGACAACTTATTATGGCAGAAGGATTTGAAATCACTAGCACATACAACTCCACTCAT
TTTGATTTCGGCTCCGGCCTTGTCAGTGCAACTCGTGCTCTTGATCCAGGCCTTGTTTTA
TCAAATTTGAAGACTACATCAGTTTCTTGTGCTCTTTGGCTGACTCTGACCCTGTTTCAA
TCAAGGCGGCTACTGGAATATGGTGCAATCATTCACTTAGCCACCCAGCGAACCTGAACC
TCCCTTCAGTTACAGTTTCAGCAGTGGCAAAATCCCTAATTCTGCAGCGGAGTTTGAAGA
ATGTTGGGAACAAAACAGAGACATACTTAACCTCAGTTGTACATCCAAACGGGACAACAG
TTAGCTTGTATCCACCTTGGTTCACTATAGCCCCACAGGGAACTCAAGATTTGGCCATAC
AATTCAATGTGACCCAAGCAATTGGCGACTTCAGCTTCGGTGAGATTGTTTTAACAGGAA
GTTTGAATCATATTGTAAGAATACCATTATCAGTTAAACCAGTTTCGATATTCTAAATTA
AAGTCAATACAATTAGTTTTGGTAAAATGATAGGAGAGCCTCAAAAAGCAACAAGCTTTG
CATCTTTTCTATACCTGTATTAGGACATGGGTACTGTCCTAGATATTGGATAAAAAAATA
ATGGAAAGCAAAAGCAAAATTAATGAATAAAAATACATGCTGGAATTGGCAAAAAATATG
CCCGTTTAGGCAAGCCGATTAATCTGTAGGACACATACACTCTTTACATCTTGGATACCG
GTAAACGCTTCTTCCTTTTGACCTAGACTGGATGTGTTTAGTTTGTCGAACTGCCTTCCG
AACTCGCTGTTCAAAGACTTTCCACTCTATAGTAGAATTCTTCACGAAGATCGCTGCAAG
TCGTCTTTTATTTGGCCGTATTGTTGGCATCTTTCCTCCACCATAGTATATTCGATAACC
AGATACCAATGATGACAACTGACTCCCCGAGTCTGTCATGGCAAATGCATTGGCAGCAGT
GCAGCCAATAAAATCTAGTGCTGCTAGCTGTATAAGACATAAGCTTATCATAAATAACTC
AAGAACAAAGTACTAAGTAATCAATATTGAAAAGATCTCGAGATTCATGAAATAATTTGT
CAATGCATAGGAGCTGGTTTGACCTTAAGAGTGTCCTAATTTTCTCGGATAACAATCATT
AACCTAGAATAATAAACATAATTGGTTCCTGGCATCTTACCTGAGATGAAAAGTTCTTGA
ATGGTTCGAGTTCCGTTGCTGAAAGCAAGTTCTCTTTAGTAACTAGATAAGGATATAAGC
TGTTCAAAGCACCCAATCTTCGTGTCCCTCCATATATCTGTGCCCCCGCCACAAATACAT
GTGTCTTACGATTGAAACCAAGAGCAGCAAGCATCAGCACTGCTTCTTCAGGTGTCAATG
GACAGAGGCCCTCAGACCTGATCTCAGCAGGAGAAGGTAACCTG