Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g25620.1
CDS Infomation

gene=Cs1g25620
Sequence

ATGGTTCTCGAGGCAACGTTGATCTGTATTGATAATTCTGAGTGGATGCGTAACGGCGAT
TACGCTCCTAGTAGATTCCAAGCTCAAACTGAAGCTGCTAATCTTATTTGCGGAGCCAAA
ACTCAGTTAAATCCTGAGAATACCGTAGGTGTTATGACAATGGCAGGGAAAGGGGTTCGT
GTTTTGGTCACTCCTACTAGTGATCTTGGCAAGATCTTGGCTTGCATGCACGGTTTAGAA
ATAGGCGGTGAGTTGAATCTTGCTGCTGGGATCCAGGTGGCTCAATTGGCTCTAAAGCAT
CGCCAGAACAAAAAGCAGCAACAAAGGATTATTGTCTTCGTTGGAAGTCCCATCAAGCAT
GAAAAGAAAGTGCTGGAGATGATTGGCAGGAAGTTGAAAAAGAATAGTGTAGCACTTGAC
ATTGTCAACTTTGGTGAAGACGATGAGGGGAATACGGAGAAGCTTGAAGCACTTCTTGCT
GCTGTGAACAACAATGATAGTAGCCACCTTGTTCACGTTCCTCCTGGTCCAAATGCCCTT
TCTGATGTGCTTCTTAGTACGCCTATCTTCACTGGGGATGGTGAGGGAGGGAGTGGTTTT
GCAGCAGCTGCAGCTGCTGCTGCAGCCAGTGGTGCTTCTGGTTATGAATTTGGGGTGGAC
CCCAACCTAGATCCTGAACTGGCCCTTGCTCTCAGAGTTTCAATGGAAGAGGAGAGAGCC
AGACAAGAAGCAGCAGCTAAGAGAGCAGCAGAGGAAGCGGCTAAAAAGGAAAAACAAGGG
GAACAGCAATCTAGCTCACAGGATGTAACTATGACTGATCAAGACAGTGTTCCAGCTTCT
GAAGCTGATGATAAGAAGAAGACTACGAAGCATGACGAGGGTTTGCTACAGGAGGCCATT
GCGATGTCATCAACTCCTAGTTATCCCTCTGGGCGAGATACGAATATGTCAGAGGTAGCT
GAAGATGATCCAGAGTTGGCATTAGCTCTTCAATTATCCATGCAAGATGGCACGAAAGAC
GCACCAAGCCATAGTGACATGAGCCAGTTGTTGGCTGACCAGGCTTTTGTGTCCTCCATC
CTTGCATCGCTTCCAGGGGTTGATCCAGAAGATCCTTCTGTTAAAGATGTGCTTACTTCC
ATGCAAAACCAGTCTGAGCCCCAAGAGAAGAAGGATGAAGACAAGGTGTCAAAAGAGGAG
GAGGAGAAGAAATAA

Peptide Sequence

PEP ID

Cs1g25620.1
PEP Infomation
Sequence

MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVR
VLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVGSPIKH
EKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNAL
SDVLLSTPIFTGDGEGGSGFAAAAAAAAASGASGYEFGVDPNLDPELALALRVSMEEERA
RQEAAAKRAAEEAAKKEKQGEQQSSSQDVTMTDQDSVPASEADDKKKTTKHDEGLLQEAI
AMSSTPSYPSGRDTNMSEVAEDDPELALALQLSMQDGTKDAPSHSDMSQLLADQAFVSSI
LASLPGVDPEDPSVKDVLTSMQNQSEPQEKKDEDKVSKEEEEKK*

Transcript Sequence

Transcript ID

Cs1g25620.1
Transcript Infomation

gene=Cs1g25620 CDS=182-1396
Sequence

CTTGAGCACACGAGAACGCCACGATACCTGTCCTGCGGCTAAACTTGAAACTTCTTGCTT
TTTCCTTTTCTTATTTGAGAAGCTTAATAGTTCTTACTTGAGTCTTCTTTAACGACGCTG
CTCTCATTCTTTCCCGAGCATTGGCATTTGTTCTGTTTCTGATCTCAAAGAGTAGATAGC
CATGGTTCTCGAGGCAACGTTGATCTGTATTGATAATTCTGAGTGGATGCGTAACGGCGA
TTACGCTCCTAGTAGATTCCAAGCTCAAACTGAAGCTGCTAATCTTATTTGCGGAGCCAA
AACTCAGTTAAATCCTGAGAATACCGTAGGTGTTATGACAATGGCAGGGAAAGGGGTTCG
TGTTTTGGTCACTCCTACTAGTGATCTTGGCAAGATCTTGGCTTGCATGCACGGTTTAGA
AATAGGCGGTGAGTTGAATCTTGCTGCTGGGATCCAGGTGGCTCAATTGGCTCTAAAGCA
TCGCCAGAACAAAAAGCAGCAACAAAGGATTATTGTCTTCGTTGGAAGTCCCATCAAGCA
TGAAAAGAAAGTGCTGGAGATGATTGGCAGGAAGTTGAAAAAGAATAGTGTAGCACTTGA
CATTGTCAACTTTGGTGAAGACGATGAGGGGAATACGGAGAAGCTTGAAGCACTTCTTGC
TGCTGTGAACAACAATGATAGTAGCCACCTTGTTCACGTTCCTCCTGGTCCAAATGCCCT
TTCTGATGTGCTTCTTAGTACGCCTATCTTCACTGGGGATGGTGAGGGAGGGAGTGGTTT
TGCAGCAGCTGCAGCTGCTGCTGCAGCCAGTGGTGCTTCTGGTTATGAATTTGGGGTGGA
CCCCAACCTAGATCCTGAACTGGCCCTTGCTCTCAGAGTTTCAATGGAAGAGGAGAGAGC
CAGACAAGAAGCAGCAGCTAAGAGAGCAGCAGAGGAAGCGGCTAAAAAGGAAAAACAAGG
GGAACAGCAATCTAGCTCACAGGATGTAACTATGACTGATCAAGACAGTGTTCCAGCTTC
TGAAGCTGATGATAAGAAGAAGACTACGAAGCATGACGAGGGTTTGCTACAGGAGGCCAT
TGCGATGTCATCAACTCCTAGTTATCCCTCTGGGCGAGATACGAATATGTCAGAGGTAGC
TGAAGATGATCCAGAGTTGGCATTAGCTCTTCAATTATCCATGCAAGATGGCACGAAAGA
CGCACCAAGCCATAGTGACATGAGCCAGTTGTTGGCTGACCAGGCTTTTGTGTCCTCCAT
CCTTGCATCGCTTCCAGGGGTTGATCCAGAAGATCCTTCTGTTAAAGATGTGCTTACTTC
CATGCAAAACCAGTCTGAGCCCCAAGAGAAGAAGGATGAAGACAAGGTGTCAAAAGAGGA
GGAGGAGAAGAAATAATTCTCTGCAGTTGCTTTTCAATGTCAGGTTTAGACTACTGAATT
CACCCAGTTCATGATCTGTATCAGCTTCTGGGGTACAAGATGTTTCAAATTTGATAAATT
CATGTAAATTTCTTACTTTTTGGGATCTCCAGGTTACTAATATTTGTGATAACGGTAGTG
ATTATTAGATGAAGTTTTTATTATCGCAAGTCATTAACCTCTTCATTGTGGCCAATGAAT
GGTGCAGATTGTGATTTTCATTTGTATTTGAAAAGGCTTCACAGTAACCACTAGTTTATT
AATGGCAACTTTCTAAATTATGCACCGAATGAATCAACGCTAATACAGGGTTGCTGCAGA
ACAGTGTTTTGTCTGGCTATACATATTGTCGTTCATATTTACTCGAGTCTTGAGGTTGAG
CCTTTGCTTGTGGGAATACATTTGAAATGCTTATGCAGAGACAAATGTCGTGATTTTGTG
GCGATTAAGACACAGAGATTGTTTTTCTCTTGGCCTCCAAAGCAGATTCGAAAAAATAAA
CTTTTGACATACTTATGTGGGGAAACAGCTGTAAATAAATGACAAAAAAGAAGGAAAAAA
GCGTTTCTGTAGAAGCGTCAAAAGCTTGTTAATTGATTATCGTGG