Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g23980.3
CDS Infomation

gene=Cs1g23980
Sequence

ATGGCGCAGTTTGTTAGTCACTTTGCTGAACCTGGAGATCCTCTGTATGCTCCACCTGTA
GAGAAGGCTGAGACTCCTGTAGAAAGAAGGGCTAGAATCCACAAGTTAAGACTTGAGAAG
GGTGCAGAAAAGGCTGCTGAAGAACTTAAGAAATATGATCCTCATAATGACCCAAATGTG
TCAGGAGATCCATACAAGACACTGTTTGTTGCTAGGCTGAGTTATGAGACAACTGAGAGT
AAAATCAAAAGGGAGTTTGAGTCTTATGGGCCAATTAAACGGGTTCGGTTGGTTACTGAT
AAAGAGACAAATAAACCCAGAGGTTATGCTTTCATTGAGTACATGCACACTCGGGATATG
AAAGCTGCATATAAACAAGCTGATGGGAGGAAGCTTGATGGCAGAAGGGTGCTTGTTGAT
GTTGAGCGTGGTCGAACAGTCCCTAATTGGCGTCCTCGCAGGCTAGGCGGTGGACTTGGA
ACAACCAGGGTTGGAGGGGAAGAAGTTAACCAGAGATATTCTGGAAGGGAGCAAGAGCCT
TCAAGAGGACCATCTCGGTCTGCAGAGCCTAGGATACGAGAGGATCGACATGGTGACCGG
GAAAGATCCCGTGAAAGGGGGAGGGATAGAGAGAGGGAACGGGAGAAGTCCCTTGAGCTC
TCCCATGACAGACCAAGAGATCGTGATCATAGAGATGATAGACACCATAGAGATCGTGAC
AGAACTAGAGACAGAGAGAGGGAGAGAGACCGAGGGCGTGAACGTGACCGTGACCGAACA
CGTGATCGTGATCGCGGCCGGGATCGTGGTCGTGATCATGAACGTGATAGAGAAAAAGAC
CGTGATAAGGAGCGTGATCGTGATCGCACTCGTGAAAGGGAGAGGGACAGGGATTATGAA
GTTGGTGACCCTGACCGTGACCGAGGGTATTCCCGTGATAGGGATTCTGACTATGATCGT
ATTGATTCAAAACATGAGCGAGACCGCCATGGTGAAAGGGACTATGATCCTACTGACCAG
GAAGATGATCGTGGATGGTATGACCACCATGAGAACTATGAGCATCATCGGGGTTATGGT
GATCATGACCGTTATAATCAGTACCATGATGATGATAATGACCGCTATGATCAGATGGAG
GAAGATGATTACCGTTACGACCGTGCAACGTCTGAGTCACGTGACAAGGAGAGAACACGA
GATCTGGATCGTGAATATTGA

Peptide Sequence

PEP ID

Cs1g23980.3
PEP Infomation
Sequence

MAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV
SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM
KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEP
SRGPSRSAEPRIREDRHGDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRD
RTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE
VGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYG
DHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY*

Transcript Sequence

Transcript ID

Cs1g23980.3
Transcript Infomation

gene=Cs1g23980 CDS=323-1543
Sequence

TCGAGGGGAGCGCGCACTAGTCACTCCGACTATAAAAGGCTATCGCAAAAGCTGTCCCTT
TTCTCTTGTTTCATCTAAAAATTCACTCGACCCGAACTACCAAAACCCGATCCAAATTCA
ACAAATTCCCAACTCGATGCTATTATCTTCTTAAGAACCCTGGTCACCAAACCCTAGCTT
GTAACCAGAACCCTAGTTGGCACCCGATCTCCTCTGTAAACATGGGAGACTACAACGATG
CATTCATGCGTAACCAAAACGCCGCCGTTCAGGCCCGTACTAAGGCCCAGAACCGCGCCA
ACGTCCTTCAGCTTAAGCTGGAATGGCGCAGTTTGTTAGTCACTTTGCTGAACCTGGAGA
TCCTCTGTATGCTCCACCTGTAGAGAAGGCTGAGACTCCTGTAGAAAGAAGGGCTAGAAT
CCACAAGTTAAGACTTGAGAAGGGTGCAGAAAAGGCTGCTGAAGAACTTAAGAAATATGA
TCCTCATAATGACCCAAATGTGTCAGGAGATCCATACAAGACACTGTTTGTTGCTAGGCT
GAGTTATGAGACAACTGAGAGTAAAATCAAAAGGGAGTTTGAGTCTTATGGGCCAATTAA
ACGGGTTCGGTTGGTTACTGATAAAGAGACAAATAAACCCAGAGGTTATGCTTTCATTGA
GTACATGCACACTCGGGATATGAAAGCTGCATATAAACAAGCTGATGGGAGGAAGCTTGA
TGGCAGAAGGGTGCTTGTTGATGTTGAGCGTGGTCGAACAGTCCCTAATTGGCGTCCTCG
CAGGCTAGGCGGTGGACTTGGAACAACCAGGGTTGGAGGGGAAGAAGTTAACCAGAGATA
TTCTGGAAGGGAGCAAGAGCCTTCAAGAGGACCATCTCGGTCTGCAGAGCCTAGGATACG
AGAGGATCGACATGGTGACCGGGAAAGATCCCGTGAAAGGGGGAGGGATAGAGAGAGGGA
ACGGGAGAAGTCCCTTGAGCTCTCCCATGACAGACCAAGAGATCGTGATCATAGAGATGA
TAGACACCATAGAGATCGTGACAGAACTAGAGACAGAGAGAGGGAGAGAGACCGAGGGCG
TGAACGTGACCGTGACCGAACACGTGATCGTGATCGCGGCCGGGATCGTGGTCGTGATCA
TGAACGTGATAGAGAAAAAGACCGTGATAAGGAGCGTGATCGTGATCGCACTCGTGAAAG
GGAGAGGGACAGGGATTATGAAGTTGGTGACCCTGACCGTGACCGAGGGTATTCCCGTGA
TAGGGATTCTGACTATGATCGTATTGATTCAAAACATGAGCGAGACCGCCATGGTGAAAG
GGACTATGATCCTACTGACCAGGAAGATGATCGTGGATGGTATGACCACCATGAGAACTA
TGAGCATCATCGGGGTTATGGTGATCATGACCGTTATAATCAGTACCATGATGATGATAA
TGACCGCTATGATCAGATGGAGGAAGATGATTACCGTTACGACCGTGCAACGTCTGAGTC
ACGTGACAAGGAGAGAACACGAGATCTGGATCGTGAATATTGACGCTTGGGTAGGTCATT
CTCTCTGTATGATGATGACTGAGAAAGCTGGTATACAGAGACCTTTGAGCTTGATGGTGG
AGTCTTTAATGTCTCTTGTAACTTGATATTTGTTGTCTTATGATAACGGAAGTCTTTAGT
TGCAGTGTTGGTCTTTTTTGTTTCTATTTGCTTTAGATTTTATGATCAGGTGGTGTTTGA
TGGATCTGCTGGAGTGAGTTTGCGTGTGGAATTGTTGTTATCCAAGAACTTCTATTTTGT
GTTCTGGAGTCCTAATCTTATTTTGTGTTCTTGTCTAATGTCTCTGCTTGTTTTCATTCA
CGACGTTTGAAAAGTACTGTGTTTAAGCTGTCGACAACGCTGATGCGTTCAATATGCCTC
TCTGAATGTATCTACCTCATCATCTTGCATTAACGTGCATGAGTTTCATTCAACAGTCAA
CACTGTTGTTCTATGGGGCCTAGGCATTTGGAAGATACTGTACAAAAAAACTG