Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g23920.1
CDS Infomation

gene=Cs1g23920
Sequence

ATGAAGTGCCCATACTGTTCAGCAGCGCAGGGGCGCTGTGCCACCACAAGCACAGGGCGG
TCAATCACGGAGTGCGGCTCCTGCGGGCGAGTGATCGCTGAGCGGCAATGCCAAAATCAC
CACTTATTCCACATCCGTGCCCAAGACACCCCACTCTGCCTCGTCACCTCCGATCTCCCA
TCCATCCCCCAACCCCAGCAAAACGACGGCGTCGACGAAGACCCGTTTCAGCCCACGGGC
TTCATAACGGCTTTTTCCGCGTGGTCTTTGGTACCCAGCCCTCTTTTCCTCCGCTCCTCA
CACTCTTTCTCCGGCCAGCTCGCCGAGCTCGAGCGCACCTTCGAGCTTTTGTCCTCGTCT
ACGACGTCCACGTCTTCCAGTGTCATGATGGACAATTTGAGAGCGTATTTGCAGATCATC
GACGTGGCGTCCATTCTGGGATTGGATTATGACATTTGTGATCATGCTTTTCAGTTGTTT
AGAGATTGCTGTTCTGCTACTTGTTTGAGGAATAGAAGTGTTGAAGCTCTTGCCACTGCT
GCACTTGTTCAGGCCATTAGAGAAGCTCAAGAGCCCAGAACTCTCCAGGAAATATCAATT
GCGGCTAACGTACCGCAGAAGGAGATTGGAAAGTACATCAAGATACTGGGAGAAGCTCTA
CAACTAAGTCAGCCCATTAATAGCAATTCCATAGCAGTTCATATGCCGAGATTTTGCACC
CTCCTCCAACTCAACAAATCTGCTCAGGTGCTGGCAACTCACATAGGAGAAGTTGTGATC
AACAAATGCTTCTGCACTCGGAGGAATCCAATTAGCATCTCTGCAGCTGCCATCTATCTT
GCCTGCCAGTTAGAGGACAAACGCAAGACCCAGGCAGAAATTTGTAAGGTGACTGGTTTG
ACGGAGGTCACGCTTAGAAAAGTCTACAAGGAACTATTGGAGAATTGGGATGACCTGCTC
CCATCTAATTATACTCCAGCTGTCCCTCCGGAGAAAGCATTTCCTACCACCACCATTACC
TCAGGCCGTGCACCAACGGTCAAAGTTGATTCAGGTGAAGTAACATCTGTGGATAAAGAT
AAGCAGCCAGAAACCAAGTCAATTAAGGTAAATGAGGTGATAGAAACTGAAAGTAATGGA
CCAAATGCCGATGCTGATGGTGCCCATGCTCCTACGTTGAAGCGGCCATCACCCTTTAGC
CAACCCTGGCTTCACTTTGCGGCTTCTAATATTAGGACAACTGGAGAGAAAAATCAGATT
GTTGTTCAAGGTGACATCAACGAGGTGCAGCCAGGCCATCAAGATTTAGACCAGAAGCTC
GATGAGGACACAAAGCCAGCCACTACCACTCTAAGACCAAGTCAGTTTCCATGCACCCCC
GTTTCAACTGTGACTTCGCTCACTTGGCCATTTCGGCCCCCGCCTTCAATGGCCACTGCA
AGTTTTCAGGTTGTGGATCCACCAAAGTTACAGCCTGGTCACATTGAGCTTAAAGGCTCC
GGCGTACAGGCAGGAAGTAAAAATGATAAGTGA

Peptide Sequence

PEP ID

Cs1g23920.1
PEP Infomation
Sequence

MKCPYCSAAQGRCATTSTGRSITECGSCGRVIAERQCQNHHLFHIRAQDTPLCLVTSDLP
SIPQPQQNDGVDEDPFQPTGFITAFSAWSLVPSPLFLRSSHSFSGQLAELERTFELLSSS
TTSTSSSVMMDNLRAYLQIIDVASILGLDYDICDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSIAVHMPRFCT
LLQLNKSAQVLATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTITSGRAPTVKVDSGEVTSVDKD
KQPETKSIKVNEVIETESNGPNADADGAHAPTLKRPSPFSQPWLHFAASNIRTTGEKNQI
VVQGDINEVQPGHQDLDQKLDEDTKPATTTLRPSQFPCTPVSTVTSLTWPFRPPPSMATA
SFQVVDPPKLQPGHIELKGSGVQAGSKNDK*

Transcript Sequence

Transcript ID

Cs1g23920.1
Transcript Infomation

gene=Cs1g23920 CDS=1577-3109
Sequence

TAGACTGGAGATTCGGCTCCCCATTTTTTTTGGTTCTTTGCAATGAACTTACTATTTATC
CTAAAACTTCTTGCCTGCAATCATTATTAACCTGAAGTGGAATACCTGTTTGTAGCTATA
TACTTGCTAGCTATGTTTGCAATTTTCTTGGTTCTAAAATACTTTTAGAATAATCCTCCG
TTTGTAATCATTTGATTTTTAATGATTTAAGCTCCAAACATTCTATCATATTGATGTAAG
GAACAATGATTTGCATTTTTCAATTTCGAATGGGTGTGTGCTGGGCCTGCTGGCTTCACT
TCACTTTTCTGCCATTTGTAAACAAATGGTGAATCATAGGGATATTCAATCTCTTCAATC
CTGAACATAGGTTTGACACTCTTCTTGCTAAAATAACAAAATCCAGCCTTTATATGAAAC
TTCAAGTCATTCTGAAATGGAAGATTGTATTTTGTGCTGAAAATAGTTTGTTATGTGTAC
TTCAGTAATTGAGAAAAACATGTCCTCCTGCTTATCATTTTTGCATTGGTAAATAGTATG
ATTCTGAAATGTGAAAACTGTTGGAGCTAACACTAACCAGCATTTGAACTGCAGTATTCT
TGTGCTTGATTTATTAGATCAAGGCATACAGAAACTAACACAAGATTTGGATCGTGTTCT
TCTTATTTATTTTGTCAGAGTGCACATCAATTTAGTAAGAGCCTGAAGCTAGCTGAGAGA
GGCAGGGCATTGTTAACCTCATCTGGGACTGGTTGATGAAAAGAATTCTGACGATCTGAA
GCTAGAAATCTTCATTCTGCTACTATGCTGCTCAAAACTACAAAGCAGCTGTGATTTGGA
CAAAACCATACACAAGACTCAGTTTTTCATGTTTCTTTAAACAGAGACATCTTATGTATT
TAAATTAGGCTCGCATTCTTCCAAATTTTTGCTGTTACTGTCATTTGTGTTGGGTAGAAG
AGTAAAACAACCTTATGAACAGGTAAACTAAAGTGAGATTTTTTCCCGTACTTTCTTTAT
ATGAGGTTCCATGTTTAAAAATTCAGGAAGAATTTTACCACGCTGTATTTTGGTATCATG
CTCGAGCATGAAGCATGTAAGATATATACAAGGTTTTTTCTGTTGATTATTTCATAAGCA
GATATCTCATGGTGGTTTCTCTGTAATGCTAGTTTATAGAGATTGTATTTTTCAATTGTT
TAGTGGATATTATCTTTATAGCTGCCAGCCAGTTCAGCATTTATAATGAAATTAAGCTTT
CCTGGCTTCCTGTAATGAACTGTCCATTTGAACAAGAAACTGGAGAAGAGTGAAGAAAAA
AGGGAAGTGTATAATGTTTATCCTCCAACCATATTCTATTTTCCCACAATTTTCTAATGA
TTTATTTATTTATTTATAAATGCAAATTGTCAATATTTTTATCATTGCTTAACTGGTTTG
GTTCGATCTTTTTAGCAGCAAGGAGACATAAAAATTAGAAAACGTAAAATATTAGTTCAG
AAACGAGTATCGGTGTATCACAAATGATTTTGCCCTCACTTTCTTCATCGCAAACAATCC
AACCACAGGCTGTCAAATGAAGTGCCCATACTGTTCAGCAGCGCAGGGGCGCTGTGCCAC
CACAAGCACAGGGCGGTCAATCACGGAGTGCGGCTCCTGCGGGCGAGTGATCGCTGAGCG
GCAATGCCAAAATCACCACTTATTCCACATCCGTGCCCAAGACACCCCACTCTGCCTCGT
CACCTCCGATCTCCCATCCATCCCCCAACCCCAGCAAAACGACGGCGTCGACGAAGACCC
GTTTCAGCCCACGGGCTTCATAACGGCTTTTTCCGCGTGGTCTTTGGTACCCAGCCCTCT
TTTCCTCCGCTCCTCACACTCTTTCTCCGGCCAGCTCGCCGAGCTCGAGCGCACCTTCGA
GCTTTTGTCCTCGTCTACGACGTCCACGTCTTCCAGTGTCATGATGGACAATTTGAGAGC
GTATTTGCAGATCATCGACGTGGCGTCCATTCTGGGATTGGATTATGACATTTGTGATCA
TGCTTTTCAGTTGTTTAGAGATTGCTGTTCTGCTACTTGTTTGAGGAATAGAAGTGTTGA
AGCTCTTGCCACTGCTGCACTTGTTCAGGCCATTAGAGAAGCTCAAGAGCCCAGAACTCT
CCAGGAAATATCAATTGCGGCTAACGTACCGCAGAAGGAGATTGGAAAGTACATCAAGAT
ACTGGGAGAAGCTCTACAACTAAGTCAGCCCATTAATAGCAATTCCATAGCAGTTCATAT
GCCGAGATTTTGCACCCTCCTCCAACTCAACAAATCTGCTCAGGTGCTGGCAACTCACAT
AGGAGAAGTTGTGATCAACAAATGCTTCTGCACTCGGAGGAATCCAATTAGCATCTCTGC
AGCTGCCATCTATCTTGCCTGCCAGTTAGAGGACAAACGCAAGACCCAGGCAGAAATTTG
TAAGGTGACTGGTTTGACGGAGGTCACGCTTAGAAAAGTCTACAAGGAACTATTGGAGAA
TTGGGATGACCTGCTCCCATCTAATTATACTCCAGCTGTCCCTCCGGAGAAAGCATTTCC
TACCACCACCATTACCTCAGGCCGTGCACCAACGGTCAAAGTTGATTCAGGTGAAGTAAC
ATCTGTGGATAAAGATAAGCAGCCAGAAACCAAGTCAATTAAGGTAAATGAGGTGATAGA
AACTGAAAGTAATGGACCAAATGCCGATGCTGATGGTGCCCATGCTCCTACGTTGAAGCG
GCCATCACCCTTTAGCCAACCCTGGCTTCACTTTGCGGCTTCTAATATTAGGACAACTGG
AGAGAAAAATCAGATTGTTGTTCAAGGTGACATCAACGAGGTGCAGCCAGGCCATCAAGA
TTTAGACCAGAAGCTCGATGAGGACACAAAGCCAGCCACTACCACTCTAAGACCAAGTCA
GTTTCCATGCACCCCCGTTTCAACTGTGACTTCGCTCACTTGGCCATTTCGGCCCCCGCC
TTCAATGGCCACTGCAAGTTTTCAGGTTGTGGATCCACCAAAGTTACAGCCTGGTCACAT
TGAGCTTAAAGGCTCCGGCGTACAGGCAGGAAGTAAAAATGATAAGTGATGTAGAAAACT
AGTGGATCCATAGAAATGGGTCCTGCTTTCTGGTGTAATGTGCTGTCAACCATCAAAAAG
TATAATTTGTTTTGAATCTTGATTCTTAAGTTCATGTACATGTATTTCAGTTGTTGCGCA
TGCATTGTACGACATATTGCTTCATGTTAAAACTGAGAGTTCACGAAGTCCACTCCGTTG
AACTGTTATTGAATTGCCGATTGATAAAATGCGAATCAGCAATTCGGGCAAATCTTTGTT