Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g23660.4
CDS Infomation

gene=Cs1g23660
Sequence

ATGATGGGAGGACAATCTAGCAAGAAGAAAGGTGGTGATGCACCGTCGCCACCTCTTGAA
GTGATCACTGATGCCCAATATTCAGCTGACCTTAGCTTGTATGAGGCTGCATGTAGACTT
GATCCTGACTTGCAATCCTTTGACGCCACCATTCAAGAGCGTACTAGCCGTGTTATCCAC
AAGCTTTCAGCTGGTGTTGAGGTCCATTCCTTATCTTTTGACTCACTCAAAGAGGTCACT
GGGTCTCTTCTTGAAATGAATCAAGAAGTGGTCAAAGTCATTCTAGAATGCAAGAAAGAT
ATATGGAACAATCAAGATTTGTTTGGTTTGGTTGAGGACTACTTTGAGACTAGTATCAAG
ACTTTGGATTTTTGCACTGTTCTAGAGAATTGCCTTAAGCGTGCTAGAAACAGTCAACTA
ATTATTCAGCTTGCAGTTAAGCAATTCGACGAAGAAGTAGAATTACAGGAGGTGGTTGAT
GAGAAGAGGTATGTGAGGACATTGGACGAATTAAAGAAGTTTAAGGATGCCGGGGACCCA
TTTACAGAAGAGTTCTTTGTGTTGTTTCAATCAGTGTATAAGCAGCAGGTATTGATGCTG
GAGAGATTGCAAAAGCGAAAGAGAAAGCTTGATAAGAAATTGAAGTCTATGAAAACATGG
AGGATGGTTTCGAATGTCTTATTCGTTTCTACCTTTGTGGCTGTATTGATTTTCTCGGTA
GTGGCAGCTGCCATTGCTGCACCTCCATTGGTAACAGCTTTGGCAGGTGCCTTGGCTGTT
CCCATTGGTTCAGTGGGGAAGTGGTGCAACTCACTGTGGAATAGCTATGAAAAGGCACTG
AAAGGGCAAAAGGAGTTAATGAGTACGATGCAAATTGGTGCTTACGTTAAAATCATGGAC
ATGGATCATATAAGAGTACTTGTGAACAAATTGGAAATTCAGATAGAAGCACTCTTGAAC
AATGCTGATTTTGCTCTTAGAGAAGAGGATGTGGTGAAGCTAGCTATTGAGGAGATCAGG
AAGAGATTGGAAGTTTTCATGGAAACTATTGAAGTTTTATGTGATCATGCTGACAAGTGT
AGCCGTGACATAAGGAGGGCAAGGACTGTGATTTTGCAGAAGATTATCAAATATCCCAAT
AATTGA

Peptide Sequence

PEP ID

Cs1g23660.4
PEP Infomation
Sequence

MMGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIH
KLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIK
TLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDP
FTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSV
VAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMD
MDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKC
SRDIRRARTVILQKIIKYPNN*

Transcript Sequence

Transcript ID

Cs1g23660.4
Transcript Infomation

gene=Cs1g23660 CDS=476-1621
Sequence

CTTGGTGCCTTCCTCTTCTTGTAGGCGTCATTGACTTGTAACACCAAACGCAGCTTTTCC
CTTGTGGCCTTTGTCTTTCTTCAGACCATTACTACACGCGTCGTTGACACTTCAAACTCT
GTAGAAACACAACAGGGTTGAGTGTTGGCGACATTTCTTATCCTAATTTTATTTCCCATT
TTCTCACATTTTCCTTCACTTTTCCTCCTTAGTTAATTCCCCACGCGCAGAAGCCAGCCA
CAACTCCTGCCCTTACTTCATAAAAAAAAACCATTTTGCTTATTATTTATTTTGTTGAAA
TATCTTTTGTCGTGTTACAATTAATTAATTGCAATATTTTCGATTCCACCGAAAAAGACC
TCTTTCACCAGTGCTTAAGCTCTTTGCTGGGATTTGGACCTGCATGTTTGCTTTTATTGA
AGGATCAAAGTAAGAGAAATTCTTATCACCTTTGTCGTTTCAGCAGAAATTCAGTATGAT
GGGAGGACAATCTAGCAAGAAGAAAGGTGGTGATGCACCGTCGCCACCTCTTGAAGTGAT
CACTGATGCCCAATATTCAGCTGACCTTAGCTTGTATGAGGCTGCATGTAGACTTGATCC
TGACTTGCAATCCTTTGACGCCACCATTCAAGAGCGTACTAGCCGTGTTATCCACAAGCT
TTCAGCTGGTGTTGAGGTCCATTCCTTATCTTTTGACTCACTCAAAGAGGTCACTGGGTC
TCTTCTTGAAATGAATCAAGAAGTGGTCAAAGTCATTCTAGAATGCAAGAAAGATATATG
GAACAATCAAGATTTGTTTGGTTTGGTTGAGGACTACTTTGAGACTAGTATCAAGACTTT
GGATTTTTGCACTGTTCTAGAGAATTGCCTTAAGCGTGCTAGAAACAGTCAACTAATTAT
TCAGCTTGCAGTTAAGCAATTCGACGAAGAAGTAGAATTACAGGAGGTGGTTGATGAGAA
GAGGTATGTGAGGACATTGGACGAATTAAAGAAGTTTAAGGATGCCGGGGACCCATTTAC
AGAAGAGTTCTTTGTGTTGTTTCAATCAGTGTATAAGCAGCAGGTATTGATGCTGGAGAG
ATTGCAAAAGCGAAAGAGAAAGCTTGATAAGAAATTGAAGTCTATGAAAACATGGAGGAT
GGTTTCGAATGTCTTATTCGTTTCTACCTTTGTGGCTGTATTGATTTTCTCGGTAGTGGC
AGCTGCCATTGCTGCACCTCCATTGGTAACAGCTTTGGCAGGTGCCTTGGCTGTTCCCAT
TGGTTCAGTGGGGAAGTGGTGCAACTCACTGTGGAATAGCTATGAAAAGGCACTGAAAGG
GCAAAAGGAGTTAATGAGTACGATGCAAATTGGTGCTTACGTTAAAATCATGGACATGGA
TCATATAAGAGTACTTGTGAACAAATTGGAAATTCAGATAGAAGCACTCTTGAACAATGC
TGATTTTGCTCTTAGAGAAGAGGATGTGGTGAAGCTAGCTATTGAGGAGATCAGGAAGAG
ATTGGAAGTTTTCATGGAAACTATTGAAGTTTTATGTGATCATGCTGACAAGTGTAGCCG
TGACATAAGGAGGGCAAGGACTGTGATTTTGCAGAAGATTATCAAATATCCCAATAATTG
AAGAAGTCCTTCGGTAATTATGCTGATGACTTTCCCATAATTGTTGTCTTATGTATTGTA
CTAGGTGAAAATCTCTAACTCTGCACTTGTGGTCTATTCATTTTGGATTGATTACAAAGA
GTAGTTTGTTTATACAGGCCTATACTCAATGTTTTTATCTTTCATACTTTCTTCATAGCA
GACAGGAATACTTTTGTTTCGTTTTCCATAATTGTTCATGTGTTGTCTTTTTGCTCCCTG
CTCTAGCATTAGAATTCTGGTCCTGCAACTGTCATGGTTTGACAATCATTTTAGGCTCGT
AGTTAACTATACATTCAGTCAAAAGATGCATCTATGACTGAAACAATTGTTGTCATAAAC
ACATAATAGTCTCATTTATTGATCCATTGATGAACAATGGCCACTCTCTGGTCTATAAAA
GATTAAGCTGAGCTTACTTTACAAAACTAAAAATTATTGTTTTGCATATTTCGCAAGTGA
TCCACTTGTGTGTATTCTGTCTTAGTTTAGTTGATTTTCTTAGTAGGTTGTGCAAATAGA
ATTGCAATACTGGAAACTGATATTGATGAATAGTCTGACATTGAATGTTACACTCTAGTT
CTCCTAGCCAAGAAAAAGAAGAATGAAAGACATATCTGCTACATAAGTCAATCTGAATAC
AAACTGATCGAAAGGGTGTGACATATATTGCAGTGTGGAAGAGCATCTGCTGGAAGTGCA
TTCCAGAGGATTACTTCAGAAATCGTTTGAAGTGTCTATTAGTTCCAGAATGTGTGCTTA
TTTATTTCAAGGAATCACTTGAAAGTACTTAGAACTTGGATCATTTCTTGATCAAAAGCA
TCTCATTTACTCCATTTAGTTGTTTTGATAGTCATTTGTGTCATGCTGAGTCGTGTGTCA
TTTTGAATTGACGGCTTGCCAACTCAGCTTTCGAAGAGTAAGATGAGTGAACGGTTGAAC
AGGCATCATGGTCATTTATATAACTTCCATTTATATGGGAATATAACTCAAGCTCTAAAG
TTATGTTGACGGATTTTAGATTTACTATATTGTTATTTGTGGAGTGATTTTTGCGCTACA
GCACTGAACATGATGGGGGATATCATATTGGATATATATGTGTGTGTGTGTGTGTGTGTG
CAGCTTAATTACAGGATCAGAACCAGACTGCTCACTATTTCTGGGCATCATATTTGCTGA
AAGAGCAGATGAAAATATATGCGTAATCATACAAAATGGTTTGAATAAAATTTGTATAAC
AAAATAAAGATCTC