Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g21310.1
CDS Infomation

gene=Cs1g21310
Sequence

ATGGTGAGTACTACTGCCACGACTACTTCAACACCAAAACTGGAGGACTTCTTTGGTGGT
GCAACAATGGGGACCCATCATTATGAAAGCAATGACAGAGAAGCCATGGCTCTCAGTTTA
GACAGCATGTATTACCACCATAACCCAGAAAATGAGCCCAGCAGCCAAAATTGCCTAAAC
CAACTCGAAGAAAATTCTAGGCACCAGCAACAACAGATTCAGGACCAACAGTACCAGTAC
TATACTACTGGTTTTAGGAGCCATGAGATGTTACTGGGAGACAAAGGCAAAGAAATCCAG
GTAGCAGATTGCAATCTGCAGCTCCCAGCAATGGCAGATGATGGGATGCATGGCATGAAG
AATTGGGTTTCAAGGAACTATGCCACTGAACAGGCCATGCAACAGAAATTACTTGGTTGC
ATGAGCCACAATGGAGGTGAATCTGGGGACATTAGTGCAATGCCATATGGAGATTTACAG
TCTTTGAGTTTATCCATGAGTCCTGCTTCCCAATCTAGCTGTGTTACTGGTTCACAGCAA
GTCTCTCACGCTGTGTCAAACTGTGCGGCTGTGGAAAGAAAGAAAAGGGGGTCAGAAAAG
ATGGATCAGAAGCAAGTTGCGCATAGGAAGTCCCTTGATACATTTGGGCAGAGAACCTCT
CAGTATAGAGGTGTTACAAGGCATAGATGGACTGGTAGGTATGAAGCTCATCTGTGGGAC
AACAGTTGCAAGAAAGAAGGACAAAGTAGGAAAGGAAGGCAAGGGGGTTATGATATGGAA
GAGAAAGCTGCAAGAGCTTATGATCTAGCTGCACTTAAGTACTGGGGGCCCTCGACGCAT
ATCAATTTCCCTCTGGAAAATTATCAAAAAGAACTTGAAGAAATGAAGAATATGAACAGG
CAGGAATATGTTGCTCACTTGAGAAGGAAAAGTAGTGGATTCTCGAGGGGAGCTTCAATA
TACAGAGGAGTAACGAGACATCATCAACATGGAAGATGGCAAGCAAGGATTGGCAGAGTT
GCAGGAAATAAGGACCTTTATCTTGGAACATTCAGCACACAGGAGGAAGCTGCTGAAGCC
TATGACATTGCGGCAATAAAATTTCGCGGGGTGACTGCTGTAACTAACTTTGACATAACA
AGGTACGATGTGGAACGAATCATGGCAAGCAGTAACCTTCTTGCTGGTGAACTTGCCAGG
AGAAACAAGGAGATGGGGCCTGGTAATGATGCTCCTAATCAAAACCCTTCTGCTCATACC
GGCAACGGGGATCTCATACTCTCTCAGAAGGACAATGAAAGTGATCCACCCGATTGGAAA
CTAGTCTCATATCAATCATCTCAGCAACTTGAGCATAAAGCACCAAATATGAGTATTATC
AATAACTACAATGCTCATTTGTTCTCGTTGGCCCCGGACAGTGTGATTGCGATGGATGCA
ATGGGCTCAGCTCAGCAAGAAGTTGAGAGCTCAGCCAAGATGGGGAATCATTTGTCAAAC
GCTTCTTCATTGGTGACTAGCTTGAGCAGCTCAAAAGAAGGAAGCCCTGATGGAAGCAGC
GTGCCAATACCATTTGCAATGCCTCGTACAGCATCCAAGTTGTTGACCAGCCCGACAAAC
ACAGTGAATTCTTGGATTCCTTCCGCAGAACTGAGGCCTGCACTCTCCGTTCCTCACATG
CCAGTTTTTGCTGCATGGACTGATGCTTAG

Peptide Sequence

PEP ID

Cs1g21310.1
PEP Infomation
Sequence

MVSTTATTTSTPKLEDFFGGATMGTHHYESNDREAMALSLDSMYYHHNPENEPSSQNCLN
QLEENSRHQQQQIQDQQYQYYTTGFRSHEMLLGDKGKEIQVADCNLQLPAMADDGMHGMK
NWVSRNYATEQAMQQKLLGCMSHNGGESGDISAMPYGDLQSLSLSMSPASQSSCVTGSQQ
VSHAVSNCAAVERKKRGSEKMDQKQVAHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWD
NSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQKELEEMKNMNR
QEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEA
YDIAAIKFRGVTAVTNFDITRYDVERIMASSNLLAGELARRNKEMGPGNDAPNQNPSAHT
GNGDLILSQKDNESDPPDWKLVSYQSSQQLEHKAPNMSIINNYNAHLFSLAPDSVIAMDA
MGSAQQEVESSAKMGNHLSNASSLVTSLSSSKEGSPDGSSVPIPFAMPRTASKLLTSPTN
TVNSWIPSAELRPALSVPHMPVFAAWTDA*

Transcript Sequence

Transcript ID

Cs1g21310.1
Transcript Infomation

gene=Cs1g21310 CDS=857-2566
Sequence

AAAGCAAAATTAAAGAAGAGGTCTTTCTCGTACACAGATCCCTATGGAATGCAGCAAAGA
TGCCCAGCATTGCTTGTTGGAACTCATTCCTTTTGTTTAGTTTAAAGGAACTTGCTTTGT
TCTCATTTGAAATCTTTTTTCATTGAGACAGACATACAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGCCCTAGATTGAGTCGCAGGATTTTTAGATTTGTTTAGTTGTGTAGTTAGAT
TCACTCCGATCACTCTGCTACTAGAAAACAAAAAAAAAAAAAAAAAAAAGCCCATGTCTG
AACTTTGAAAATGGGGCGAAGAGGTGTTATGATTAGTTTATTAGCTTGCCAATGATTGAC
TTGCCTAGCATCAAGAGAAAAAGAAAATTGCCTAGAATCTCAGCTAAGTGGGGATAGTAG
CAACCTTGAGAGTTGAGAGAAGATGAAGTCCATGAACAATGATGATACCAACAACAACAA
CATCAACAATGATAACTGGTTAGGCTTCTCTTTGTCTCCTGACATTAAAATGGAGGTTCC
TCAAGACCCTCACCCCCAAACACAGCCTTCCTCTCCTTCTACTTCTGCTGTTATGCCTCC
CCCGTCAGTCCCTTCGAGCCTCTTCCAATGCCTACCTTATGGCTTTTACTATGGCTTTGA
AGGTGAAAATAGTAGCTTGTATTCTCCTTTACCTGTCATGCCTCTCAAGTCTGATGGTTC
TCTTTGTATTATGGAAGCTCTCAGCAGGTCACAGCAGCCTCAAGGTTAGGCTCATACTTC
TACTAGCATATTATTTTCTTTCGGGCTTCGTTTTCTGCTTTGGCCTTTTAATCCTTTTGA
CTTTTCATGTGAAGGAATGGTGAGTACTACTGCCACGACTACTTCAACACCAAAACTGGA
GGACTTCTTTGGTGGTGCAACAATGGGGACCCATCATTATGAAAGCAATGACAGAGAAGC
CATGGCTCTCAGTTTAGACAGCATGTATTACCACCATAACCCAGAAAATGAGCCCAGCAG
CCAAAATTGCCTAAACCAACTCGAAGAAAATTCTAGGCACCAGCAACAACAGATTCAGGA
CCAACAGTACCAGTACTATACTACTGGTTTTAGGAGCCATGAGATGTTACTGGGAGACAA
AGGCAAAGAAATCCAGGTAGCAGATTGCAATCTGCAGCTCCCAGCAATGGCAGATGATGG
GATGCATGGCATGAAGAATTGGGTTTCAAGGAACTATGCCACTGAACAGGCCATGCAACA
GAAATTACTTGGTTGCATGAGCCACAATGGAGGTGAATCTGGGGACATTAGTGCAATGCC
ATATGGAGATTTACAGTCTTTGAGTTTATCCATGAGTCCTGCTTCCCAATCTAGCTGTGT
TACTGGTTCACAGCAAGTCTCTCACGCTGTGTCAAACTGTGCGGCTGTGGAAAGAAAGAA
AAGGGGGTCAGAAAAGATGGATCAGAAGCAAGTTGCGCATAGGAAGTCCCTTGATACATT
TGGGCAGAGAACCTCTCAGTATAGAGGTGTTACAAGGCATAGATGGACTGGTAGGTATGA
AGCTCATCTGTGGGACAACAGTTGCAAGAAAGAAGGACAAAGTAGGAAAGGAAGGCAAGG
GGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTAGCTGCACTTAAGTACTG
GGGGCCCTCGACGCATATCAATTTCCCTCTGGAAAATTATCAAAAAGAACTTGAAGAAAT
GAAGAATATGAACAGGCAGGAATATGTTGCTCACTTGAGAAGGAAAAGTAGTGGATTCTC
GAGGGGAGCTTCAATATACAGAGGAGTAACGAGACATCATCAACATGGAAGATGGCAAGC
AAGGATTGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGAACATTCAGCACACAGGA
GGAAGCTGCTGAAGCCTATGACATTGCGGCAATAAAATTTCGCGGGGTGACTGCTGTAAC
TAACTTTGACATAACAAGGTACGATGTGGAACGAATCATGGCAAGCAGTAACCTTCTTGC
TGGTGAACTTGCCAGGAGAAACAAGGAGATGGGGCCTGGTAATGATGCTCCTAATCAAAA
CCCTTCTGCTCATACCGGCAACGGGGATCTCATACTCTCTCAGAAGGACAATGAAAGTGA
TCCACCCGATTGGAAACTAGTCTCATATCAATCATCTCAGCAACTTGAGCATAAAGCACC
AAATATGAGTATTATCAATAACTACAATGCTCATTTGTTCTCGTTGGCCCCGGACAGTGT
GATTGCGATGGATGCAATGGGCTCAGCTCAGCAAGAAGTTGAGAGCTCAGCCAAGATGGG
GAATCATTTGTCAAACGCTTCTTCATTGGTGACTAGCTTGAGCAGCTCAAAAGAAGGAAG
CCCTGATGGAAGCAGCGTGCCAATACCATTTGCAATGCCTCGTACAGCATCCAAGTTGTT
GACCAGCCCGACAAACACAGTGAATTCTTGGATTCCTTCCGCAGAACTGAGGCCTGCACT
CTCCGTTCCTCACATGCCAGTTTTTGCTGCATGGACTGATGCTTAG