Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g21110.1
CDS Infomation

gene=Cs1g21110
Sequence

ATGGCCTCTAAGCTAATAGCTTCAACTCTCCGCAAAACCCTAACTAAGGCCGCCAAGACC
GCCGGCGTCCGCTCCCTTTCCAACGCCACAGCCGCCGCGGTTTCTACGGCGTATGAACCT
CAGGAGGACCAAAACGGAATCACCTTGAAAGGCGTGAGAATCGCGGGCCGCCCTCTCTAC
CTCGATATGCAAGCAACCACTCCAGTCGACCCACGTGTCCTCGATGCCATGCTCCCTTTC
TATCTTTCTCGTTACGGTAACCCCCACTCCCGGACCCACCTCTTCGGCTGGGAATCCGAA
GTCGCCGTCGAAACCGCCCGCTCTCAAATCGCCGATCTTATCGGCGCTTCTCCTAAAGAG
ATAATTTTCACTTCCGGCGCAACGGAATCGAATAATGTCTCCATCAAAGGAGTCATGCAC
TTTTACAAGGATAAAAAGCGCCACGTCATCACCACTCAGACCGAGCACAAGTGCGTTCTC
GATTCGTGCCGGCATCTTCAGCAGGAAGGTTTTGAAATTACTTATTTACCTGTTGGAGCT
GATGGGATTGTTAATTTAGATGAATTGCGAGCTGCTATTAGGCCTGACACCGGCTTGATT
TCTGTTATGGCGGTTAACAACGAAATTGGCGTGATTCAGCCTATGGAAGAAATCGGGCAA
ATTTGTAAAGAATTTAAAATCCCGTTTCACACTGATGCTGCCCAGGCGTTGGGGAAGATT
CCGGTTGATGTCGAGAAATGGAATGTGAGTTTGATGTCGTTGAGTGGTCATAAGATTTAT
GGCCCGAAAGGAGTCGGTGCTTTGTATATGAGACGAAGGCCAAGAATTCGAGTTGAACCG
TTGATCAATGGAGGTGGGCAGGAGAGAGGGATAAGGAGTGGCACCTTGCCTACACCGTTA
ATTGTGGGATTTGGCTCGGCCTGTGAGATTGCAAAAAAGGAGATGGACTATGATCATAAG
AGGATTACTGCTTTGCATGACCGGTTATTGAATGGAATTAAGGAAAAACTTGATGGAGTG
GTGGTAAATGGGAGTATGGAGAGGAGGTACATAGGGAATTTGAACTTGTCATTTGCTTAT
GTTGAAGGAGAGAGTTTGTTGATGGGGTTGAAGGAGGTGGCAGTCTCTAGCGGAAGTGCA
TGTACAAGTGCAAGTTTGGAGCCATCATATGTTCTGAGGGCATTAGGTGTGGACGAGGAT
ATGGCACATACTTCGATTAGGTTTGGGATTGGGAGGTTTACTACGGAGGCGGAGGTTGAT
AGGGCTATTGAGCTTACAGTGAAGCAGGTTGAGAAGTTGAGGGAAATGAGCCCGCTATAT
GAGATGGTGAAAGAAGGAATTGATATAAAGCAGATACAATGGGCTCAACACTGA

Peptide Sequence

PEP ID

Cs1g21110.1
PEP Infomation
Sequence

MASKLIASTLRKTLTKAAKTAGVRSLSNATAAAVSTAYEPQEDQNGITLKGVRIAGRPLY
LDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKE
IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA
DGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKI
PVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPL
IVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY
VEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVD
RAIELTVKQVEKLREMSPLYEMVKEGIDIKQIQWAQH*

Transcript Sequence

Transcript ID

Cs1g21110.1
Transcript Infomation

gene=Cs1g21110 CDS=267-1640
Sequence

CATATCCCAATTTTGGGATGTATGGGGTGGAGTGAAATTACCTCTCAGAAAGGTGATAGA
CCTTCATCAGCATAATTCATGATCATATGGGTTACTAAATGTGATTTACACATCTCACCT
CCAAATGCCACGTGTTACAATGATGTACATCCGTTCCCAAAACAGTCGGTGAAGGTGACC
CTAAAGAGCCAGCCCTTGATCAAGTATATCAATCAGACTTTTACTACGCAACGAAGCAAA
GCAAAGAGAAAAAGAAGCCGTTGAAAATGGCCTCTAAGCTAATAGCTTCAACTCTCCGCA
AAACCCTAACTAAGGCCGCCAAGACCGCCGGCGTCCGCTCCCTTTCCAACGCCACAGCCG
CCGCGGTTTCTACGGCGTATGAACCTCAGGAGGACCAAAACGGAATCACCTTGAAAGGCG
TGAGAATCGCGGGCCGCCCTCTCTACCTCGATATGCAAGCAACCACTCCAGTCGACCCAC
GTGTCCTCGATGCCATGCTCCCTTTCTATCTTTCTCGTTACGGTAACCCCCACTCCCGGA
CCCACCTCTTCGGCTGGGAATCCGAAGTCGCCGTCGAAACCGCCCGCTCTCAAATCGCCG
ATCTTATCGGCGCTTCTCCTAAAGAGATAATTTTCACTTCCGGCGCAACGGAATCGAATA
ATGTCTCCATCAAAGGAGTCATGCACTTTTACAAGGATAAAAAGCGCCACGTCATCACCA
CTCAGACCGAGCACAAGTGCGTTCTCGATTCGTGCCGGCATCTTCAGCAGGAAGGTTTTG
AAATTACTTATTTACCTGTTGGAGCTGATGGGATTGTTAATTTAGATGAATTGCGAGCTG
CTATTAGGCCTGACACCGGCTTGATTTCTGTTATGGCGGTTAACAACGAAATTGGCGTGA
TTCAGCCTATGGAAGAAATCGGGCAAATTTGTAAAGAATTTAAAATCCCGTTTCACACTG
ATGCTGCCCAGGCGTTGGGGAAGATTCCGGTTGATGTCGAGAAATGGAATGTGAGTTTGA
TGTCGTTGAGTGGTCATAAGATTTATGGCCCGAAAGGAGTCGGTGCTTTGTATATGAGAC
GAAGGCCAAGAATTCGAGTTGAACCGTTGATCAATGGAGGTGGGCAGGAGAGAGGGATAA
GGAGTGGCACCTTGCCTACACCGTTAATTGTGGGATTTGGCTCGGCCTGTGAGATTGCAA
AAAAGGAGATGGACTATGATCATAAGAGGATTACTGCTTTGCATGACCGGTTATTGAATG
GAATTAAGGAAAAACTTGATGGAGTGGTGGTAAATGGGAGTATGGAGAGGAGGTACATAG
GGAATTTGAACTTGTCATTTGCTTATGTTGAAGGAGAGAGTTTGTTGATGGGGTTGAAGG
AGGTGGCAGTCTCTAGCGGAAGTGCATGTACAAGTGCAAGTTTGGAGCCATCATATGTTC
TGAGGGCATTAGGTGTGGACGAGGATATGGCACATACTTCGATTAGGTTTGGGATTGGGA
GGTTTACTACGGAGGCGGAGGTTGATAGGGCTATTGAGCTTACAGTGAAGCAGGTTGAGA
AGTTGAGGGAAATGAGCCCGCTATATGAGATGGTGAAAGAAGGAATTGATATAAAGCAGA
TACAATGGGCTCAACACTGAGGCGGCTGTTGATGTGAAATTGTATGTGTGTCAAGTGAAA
AGGCAGACCTGTGAGTAGAGCAGATAACCACCTTTGAGTTTTAATCCAGGTTTCTTCCCG
TTGTGCTTGTACATGCCTTAATCTGATGAGAGCTTTCATAGTGTCCTATAATATAATTTT
GAAAGATGACGCTGTCTTAGATTTTTCTTTGTTGCTGATATAAACTTTATGCCTTACCAT
CTAGACTTGGGGCGTAATGTACTTGTTGGTTTTTATGTAGTTGTGGTGGTTAACTGGTTA
TACTGCCTTTTGGATTTGTAACATATTCCTTGTCACTACTTCTATTTTACTCACTGGAAT
AAAGAGGTACGTCAATACTTTTTTAGGGTCATATAATTATATTTGTGTAACTTAAACAAA
CGGTTTGGGCTCTGCCCAGAGCCTACCCCCTACCTGTTATATATATATGAGTAGAGAACA
AGTGGAGTGTTCTTGGTAATTAGTTGTATTTGGAAGTAGTAATCTTGTTTTTCAATGTAT
ATGTATAGAGACAAGTCAGCTGGGAAAAAACTACGAGTTTGAGCTTT