Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g19830.2
CDS Infomation

gene=Cs1g19830
Sequence

ATGGCTCTCTCAAATGCATCATCAACTCTTTCTTCCAAGTCTCTCTATGCCAATACTCAC
ACTCTTGCGTCCAAGCCTCACCAACCAAATTTCTCTCTTCACCCCGCCAACACCACCAAA
CCAAGATCTCTAGTGCAACCCATCACAGCCGTCCATGCAGCTCAACCCGCCAAGAACTCT
GCTGCTGTTAAGGAATCATCCTCGTCACCGGCAAAGGCGTCCGGGAAATGGGCGCTGGAG
GGATGGAAGACCAAGAAAGCCCTGCAGCTTCCTGAGTACCCGGATAAAGCTCAGCTGGAG
ACTGTTTTGAAGACTCTGGAAGATTTTCCTCCCCTGGTGTTTGCTGGTGAAGCAAGGAGC
CTTGAGGAGAGGCTCGCAGAGGCTGCCATGGGAAACGCTTTCTTGCTTCAGGGTGGTGAC
TGTGCTGAGAGTTTCAAGGAGTTCAATGCTAATAATATTAGGGACACTTTCAGAGTGTTG
TTGCAGATGGGTGTTGTGCTTATGTTTGGCGGCCAAATGCCTATCATTAAGGTGGGAAGA
ATGGCGGGTCAATTTGCAAAGCCAAGATCAGATCCTTTTGAGGTGAAGAATGGAGTGAAG
TTGCCGAGCTACAAGGGAGACAACATCAATGGTGATGCTTTTGATGAGAAATCAAGAGTT
CCAGACCCTGAAAGGTTGATTAGGGCTTACTGCCAGTCTGCTGCAACTCTAAACCTTCTG
AGATCCTTTGCAACGGGAGGTTACGCCGCAATGCAGAGGGTTACTCAGTGGAATCTTGAT
TTCGCTGAGCACAGTGAGCAGGGAGATAGGTACCAGGAACTGGCTCACCGTGTTGACGAG
GCCTTAGGATTCATGGCTGCTGCGGGTCTAACACTTGATCATCCTGCCATGACATCAACA
GAATTTTGGACCTCTCATGAATGCTTGCTTTTGCCTTATGAGCAAGCACTGACAAGACGA
GATTCAACTTCTGGCCAGTACTATGACTGCTCTGCTCACATGCTTTGGGTTGGGGAGCGT
ACTCGGCAGCTGGATGGTGCTCATGTGGAGTTCCTAAGAGGAATTGCCAACCCTCTTGGC
ATCAAGGTTAGCGACAAAATGGATCCAAATGAGCTAGTCAAACTTGTTGAAATCTTTAAC
CCACATAACAAGGCTGGAAGGATAACAATAATTTGCAGAATGGGTGCTGAAAACATGAGA
GTTAAGCTGCCTCATCTGATCAGGGCAGTACGCAGGGAAGGGCAAATCGTGACCTGGGTT
TGTGATCCAATGCATGGAAACACCATCAAGGCACCTTGTGGACTCAAAACTCGTCCATTT
GATGCAATTTTGGTATGGTTTCTTTCCTTGCCCACATGGTGGCTTGAACATTAA

Peptide Sequence

PEP ID

Cs1g19830.2
PEP Infomation
Sequence

MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS
AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARS
LEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGR
MAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLL
RSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTST
EFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLG
IKVSDKMDPNELVKLVEIFNPHNKAGRITIICRMGAENMRVKLPHLIRAVRREGQIVTWV
CDPMHGNTIKAPCGLKTRPFDAILVWFLSLPTWWLEH*

Transcript Sequence

Transcript ID

Cs1g19830.2
Transcript Infomation

gene=Cs1g19830 CDS=141-1514
Sequence

CATTTCAAAATCCTATAAAATCCCCCACCAAAACTCTTGTTCTGTCAACTCTACAAACAC
AAACACTCTTGTACAATCAATCATTCACTCTTCCAATTCCAGAGAAGACAGAGAGAATTA
AAAAAAAAAAAAGGACCCCAATGGCTCTCTCAAATGCATCATCAACTCTTTCTTCCAAGT
CTCTCTATGCCAATACTCACACTCTTGCGTCCAAGCCTCACCAACCAAATTTCTCTCTTC
ACCCCGCCAACACCACCAAACCAAGATCTCTAGTGCAACCCATCACAGCCGTCCATGCAG
CTCAACCCGCCAAGAACTCTGCTGCTGTTAAGGAATCATCCTCGTCACCGGCAAAGGCGT
CCGGGAAATGGGCGCTGGAGGGATGGAAGACCAAGAAAGCCCTGCAGCTTCCTGAGTACC
CGGATAAAGCTCAGCTGGAGACTGTTTTGAAGACTCTGGAAGATTTTCCTCCCCTGGTGT
TTGCTGGTGAAGCAAGGAGCCTTGAGGAGAGGCTCGCAGAGGCTGCCATGGGAAACGCTT
TCTTGCTTCAGGGTGGTGACTGTGCTGAGAGTTTCAAGGAGTTCAATGCTAATAATATTA
GGGACACTTTCAGAGTGTTGTTGCAGATGGGTGTTGTGCTTATGTTTGGCGGCCAAATGC
CTATCATTAAGGTGGGAAGAATGGCGGGTCAATTTGCAAAGCCAAGATCAGATCCTTTTG
AGGTGAAGAATGGAGTGAAGTTGCCGAGCTACAAGGGAGACAACATCAATGGTGATGCTT
TTGATGAGAAATCAAGAGTTCCAGACCCTGAAAGGTTGATTAGGGCTTACTGCCAGTCTG
CTGCAACTCTAAACCTTCTGAGATCCTTTGCAACGGGAGGTTACGCCGCAATGCAGAGGG
TTACTCAGTGGAATCTTGATTTCGCTGAGCACAGTGAGCAGGGAGATAGGTACCAGGAAC
TGGCTCACCGTGTTGACGAGGCCTTAGGATTCATGGCTGCTGCGGGTCTAACACTTGATC
ATCCTGCCATGACATCAACAGAATTTTGGACCTCTCATGAATGCTTGCTTTTGCCTTATG
AGCAAGCACTGACAAGACGAGATTCAACTTCTGGCCAGTACTATGACTGCTCTGCTCACA
TGCTTTGGGTTGGGGAGCGTACTCGGCAGCTGGATGGTGCTCATGTGGAGTTCCTAAGAG
GAATTGCCAACCCTCTTGGCATCAAGGTTAGCGACAAAATGGATCCAAATGAGCTAGTCA
AACTTGTTGAAATCTTTAACCCACATAACAAGGCTGGAAGGATAACAATAATTTGCAGAA
TGGGTGCTGAAAACATGAGAGTTAAGCTGCCTCATCTGATCAGGGCAGTACGCAGGGAAG
GGCAAATCGTGACCTGGGTTTGTGATCCAATGCATGGAAACACCATCAAGGCACCTTGTG
GACTCAAAACTCGTCCATTTGATGCAATTTTGGTATGGTTTCTTTCCTTGCCCACATGGT
GGCTTGAACATTAATGAATTTTCAAATAGTCACAGAGCTTTTGCTATTTTCTATTAAACA
ACAAGAAGGGAAAAATTTAATTATGATATCCACTTTGTTTGTAGGCTGAGGTGCGAGCTT
TCTTTGATGTGCATGAGCAAGAAGGAAGCCACCCCGGCGGCATCCATCTAGAGATGACTG
GACAGAATGTGACAGAGTGCATTGGAGGATCTCGAACAGTGACTTTCGATGATCTCAGCT
CACGCTACCACACACATTGTGACCCAAGGCTTAACGCTTCTCAATCTCTTGAGCTAGCTT
TCATCATTGCAGAACGCCTAAGGAAAAAAAGATTGGGAACACAACGTCTGCATTCCTTGG
GCCTTTAAGGTGGCTTTGTTATGTGTATCAAACTGTCTTCTCTTAGTGCGTTTGTCCATC
TATCCGTATTTGGTAGGGAATAAATTATTAAGGGTCATTCACAAAACCTTGCGTTGAGCC
TCCAGTATCATTGTATTAGCGGAACAACATGAATGATCGAGAGAGTACCGATACCTTGTT
GTATTGTTTGTCCAAGCGTTGTAACTTGGTGCCGCAAATTATAATTCAATACCATGTTTT
GCCTGTGCACTGAGCCCCCTTCCTTACCCGAAGCTGCTAACTAAATCTTAAAAAGTTATA
ATTTATTTATTGTTTGTATTTAGTATGAATTTAAGTTTGCCGCGTGATTGTTCAAAATTT
TAGAAGAAAGAA