Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g18640.1
CDS Infomation

gene=Cs1g18640
Sequence

ATGTTGCTGCCGGTTGGTGGATTAGGGATGAACTCCACTATGGATGATATGAACTTGATT
CAGCAGGCACAAAGGCATCATCTGGTGGTCAGGGAGCTTGGAGAGGAAATTGATCTAGAA
ATTGGACCAGGGGATGATGACCCTTCATTTGCTAATAATCCTCTCATGGGTGGTCCGCGA
GAACCCTCTGCAGAAGAGCATGACCAGAACAAGCAGATGGGAATGGTTTCTCAACTACCC
AATGATGATCAAGATATGTCAAAGACACAACCAGCTAAAAGGAAGAAAAAGGTGGTGAAA
AGGTGGAGGGAGGAATGGGCTGATACTTATAAGTGGGCATATGTTGATGTCAAGGAAGGA
ACAGCGAGGATATTCTGTTCTGTTTGCAGAGAGTATGGTAGGAAGCATAGAAGGAATCCT
TATGGGAATGAAGGCAGTAGGAATATGCAGATGAGTGCCCTGGAAGAACATAACAATAGT
TTGCTTCACAAAGAGGCTCTTCGCCTCCAGATGGCCTCCAAGGATAAAATCATTGCTGAC
AAGCCTATTTATGTAAAAGCTCTTATGTCAAAAACGGCTGGATCAATTGTTGAAGCCGCA
TTGAAAAGGGATCCTCATGAGATTGAGTTCATACAATCTGTCCAAGAATCTCTCCATGCT
TTAGAAAGGGTGATTGCAAAAAATTCCCATTATGTCAATATCATGGAAAGGTTGCTAGAG
CCTGAGCGTATGATTGTTTTTCGAGTTCCGTGGGTGGATGACAGGGGTGAGACTCATGTC
AATCGAGGCTTCCGGGTACAGTTCAGCCAGGCATTGGGTCCGTGTAGGGGTGGCCTCCGC
TTTCACCCATCAATGAACTTAAGCATTGCCAAGTTTCTTGGTTTCGAGCAGACATTAAAA
AATGCTTTGTCGCCATACAAACTTGGGGGGGCAGCAGGTGGAAGTGATTTTGATCCTAAA
GGGAAAAGTGATAATGAGATCATGCGCTTTTGCCAAAGTTTCATGAATGAGATCCATAGA
TATCTGGGTCCTGACAAGGACCTTCCATCAGAGGAGATGGGCGTTGGTACTAGAGAGATG
GGGTACCTCTTTGGGCAGTATAGACGTCTAGCAGGTCATTTTCAGGGAAGTTTTACAGGA
CCGAGAATATTTTGGTCTGGCTCTAGCCTTCGAACTGAAGCCACTGGCTATGGGCTGGTT
TTCTTTGCCCAGCTTATTCTCGCAGACATGAATAAGGAGCTCAAAGGACTGAGATGTGTT
GTAAGTGGTTCTGGAAAGATTGCAATGCATGTCCTGGAAAAGCTTATTGCTTATGGTGCT
ATTCCTGTTTCAGTGTCAGATGCTAAAGGATATTTGGTGGATGAGGATGGATTTGATTAC
ATGAAAATATCATTTTTGAGGGATATCAAATCACAGCAGAGAAGTTTGAGAGACTACTCA
AAGACATACGCTCGGTCTAAGTACTATGATGAAGCAAAACCTTGGAATGAAAGGTGTGAT
GTTGCATTTCCTTGTGCCTCCCAGAATGAAATAGATCAGTCTGATGCCATTAATTTGGTT
AATTCAGGTTGTCGTATACTTGTAGAAGGTTCAAATATGCCATGTACACCTGAAGCAGTT
GATGTTCTGAAAAAAGCTAATGTTCTCATAGCCCCTGCAATGGCTGCTGGTGCTGGAGGG
GTTGTTGCAGGAGAACTTGAACTAAACCAGGAGTGCAATATGGTGCACTGGTCGCCCGAG
GACTTTGAATCTAAATTACAAGAAGCTATGAAACAGACATATCAGAGAGCCCTCAAAGCA
GCAACAGATTTTGGTTATCAGAAAGAGAGTCCAGAGGCTTTGGTGCATGGAGCAGTCATC
TCATCGTTTCTTACCATTGCTCAAGCCATGACTGACCAAGGGTGTGTATAG

Peptide Sequence

PEP ID

Cs1g18640.1
PEP Infomation
Sequence

MLLPVGGLGMNSTMDDMNLIQQAQRHHLVVRELGEEIDLEIGPGDDDPSFANNPLMGGPR
EPSAEEHDQNKQMGMVSQLPNDDQDMSKTQPAKRKKKVVKRWREEWADTYKWAYVDVKEG
TARIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIIAD
KPIYVKALMSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLE
PERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLSIAKFLGFEQTLK
NALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREM
GYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCV
VSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYS
KTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV
DVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQEAMKQTYQRALKA
ATDFGYQKESPEALVHGAVISSFLTIAQAMTDQGCV*

Transcript Sequence

Transcript ID

Cs1g18640.1
Transcript Infomation

gene=Cs1g18640 CDS=276-2186
Sequence

CTGACAAAAACACGACGGATAAAAAAAGTTCGCTGTGTCTGTACAAAATCTGCTGCTATA
ATCTCTCTATAAACATATGTACATTGATATTGAGAGATGAATCACTGACCAATCTCATCA
GCAACATCAACTGTGAGCAAATTAAGTGAAAATAATTTTTTGTTTAAAGAAAAGTACTCA
AAAGAGCCAGTTTTTCAGACTGAAATTTTGTCCTTTTCCTGTTGAAGTTCTCGAATTTTT
TGAATTTTGAGTTGTGGGTAAGATTGTCATGCTGAATGTTGCTGCCGGTTGGTGGATTAG
GGATGAACTCCACTATGGATGATATGAACTTGATTCAGCAGGCACAAAGGCATCATCTGG
TGGTCAGGGAGCTTGGAGAGGAAATTGATCTAGAAATTGGACCAGGGGATGATGACCCTT
CATTTGCTAATAATCCTCTCATGGGTGGTCCGCGAGAACCCTCTGCAGAAGAGCATGACC
AGAACAAGCAGATGGGAATGGTTTCTCAACTACCCAATGATGATCAAGATATGTCAAAGA
CACAACCAGCTAAAAGGAAGAAAAAGGTGGTGAAAAGGTGGAGGGAGGAATGGGCTGATA
CTTATAAGTGGGCATATGTTGATGTCAAGGAAGGAACAGCGAGGATATTCTGTTCTGTTT
GCAGAGAGTATGGTAGGAAGCATAGAAGGAATCCTTATGGGAATGAAGGCAGTAGGAATA
TGCAGATGAGTGCCCTGGAAGAACATAACAATAGTTTGCTTCACAAAGAGGCTCTTCGCC
TCCAGATGGCCTCCAAGGATAAAATCATTGCTGACAAGCCTATTTATGTAAAAGCTCTTA
TGTCAAAAACGGCTGGATCAATTGTTGAAGCCGCATTGAAAAGGGATCCTCATGAGATTG
AGTTCATACAATCTGTCCAAGAATCTCTCCATGCTTTAGAAAGGGTGATTGCAAAAAATT
CCCATTATGTCAATATCATGGAAAGGTTGCTAGAGCCTGAGCGTATGATTGTTTTTCGAG
TTCCGTGGGTGGATGACAGGGGTGAGACTCATGTCAATCGAGGCTTCCGGGTACAGTTCA
GCCAGGCATTGGGTCCGTGTAGGGGTGGCCTCCGCTTTCACCCATCAATGAACTTAAGCA
TTGCCAAGTTTCTTGGTTTCGAGCAGACATTAAAAAATGCTTTGTCGCCATACAAACTTG
GGGGGGCAGCAGGTGGAAGTGATTTTGATCCTAAAGGGAAAAGTGATAATGAGATCATGC
GCTTTTGCCAAAGTTTCATGAATGAGATCCATAGATATCTGGGTCCTGACAAGGACCTTC
CATCAGAGGAGATGGGCGTTGGTACTAGAGAGATGGGGTACCTCTTTGGGCAGTATAGAC
GTCTAGCAGGTCATTTTCAGGGAAGTTTTACAGGACCGAGAATATTTTGGTCTGGCTCTA
GCCTTCGAACTGAAGCCACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTTATTCTCGCAG
ACATGAATAAGGAGCTCAAAGGACTGAGATGTGTTGTAAGTGGTTCTGGAAAGATTGCAA
TGCATGTCCTGGAAAAGCTTATTGCTTATGGTGCTATTCCTGTTTCAGTGTCAGATGCTA
AAGGATATTTGGTGGATGAGGATGGATTTGATTACATGAAAATATCATTTTTGAGGGATA
TCAAATCACAGCAGAGAAGTTTGAGAGACTACTCAAAGACATACGCTCGGTCTAAGTACT
ATGATGAAGCAAAACCTTGGAATGAAAGGTGTGATGTTGCATTTCCTTGTGCCTCCCAGA
ATGAAATAGATCAGTCTGATGCCATTAATTTGGTTAATTCAGGTTGTCGTATACTTGTAG
AAGGTTCAAATATGCCATGTACACCTGAAGCAGTTGATGTTCTGAAAAAAGCTAATGTTC
TCATAGCCCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTTGCAGGAGAACTTGAACTAA
ACCAGGAGTGCAATATGGTGCACTGGTCGCCCGAGGACTTTGAATCTAAATTACAAGAAG
CTATGAAACAGACATATCAGAGAGCCCTCAAAGCAGCAACAGATTTTGGTTATCAGAAAG
AGAGTCCAGAGGCTTTGGTGCATGGAGCAGTCATCTCATCGTTTCTTACCATTGCTCAAG
CCATGACTGACCAAGGGTGTGTATAGAGCAGAAGCACCATGTACAATTCTTTTTCATAAC
CCTGGAATTGGTTCCAGTTCACGAACAGCTCATCGGCAGCTCTTATGGTAAAAGAAATAT
TAACAAAGTGTACCAAATCCCTTTGTAACATATATGTAATGCAATAGTTGAGACTTAAAT
TATGGAAAGTTATTGTTACACCCATTATGTTAGAACAATGTTTAGATAATAGTAGAATCA
TAGTCCCTGCCTGGCTTCTCGTCAAATTTTTTATTACAGCAGCATTGTAAAGACTTGGTC
AGCAGAATTTGGAAATAAAGGTCAATTTATCATTTTTTTTTCC