Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g18220.4
CDS Infomation

gene=Cs1g18220
Sequence

ATGATTTACAAAGGAATTTATCACCTGTTCTACCAATACAACCCAAAAGGAGCAGTATGG
GGCAACATTGTATGGGCTCACTCTACATCAAAGGACCTGATTAACTGGATCCCACATGAT
CCAGCCATCTACCCATCACAGCAGTCCGATATCAACGGTTGCTGGTCGGGTTCAGCCACA
ATCCTGCCTGGAGAAAAACCAGCCATTTTTTACACTGGAATTGACCCACATAACCGACAG
GTCCAAAACCTGGCCGTGCCAAAAAACTTATCTGATCCTTACCTTAGGGAATGGGTTAAG
TCACCAAAAAATCCATTGATGGCACCTGATGCCATGAATCAAATCAATACAAGCTCATTC
AGAGACCCAACCACAGCATGGCTTGGCCCTGATAAGAGATGGAGAGTGATCATCGGCAGC
AAAATTAACAGAAAAGGGTTAGCAATTTTGTACAGAAGCAAAGATTTTGTGCATTGGATT
AAGGCTAAACACCCTTTACATTCTGTTAAAGGCACAGGAATGTGGGAGTGTCCTGATTTT
TTCCCTGTTTCTACTTATGGCCTAAATGGTCTTGATACATCGGATATGGGACCCAACACT
AAGCATGTGCTTAAGGTTAGCTTGGATGATACTAAGCATGAATATTACACAGTTGGAACA
TATAGCACTGCTAAAGATAGATATGTTCCGGATGAGGGTTCCGTGGAGAGTGATTCAGGA
TTGAGATTTGATTACGGAAAATATTATGCTTCCAAGACTTTCTTTGATGGTGCCAAGAAC
AGGAGGGTTTTGTGGGGTTGGGTTAATGAGTCATCAAGTGTTAATGATGATGTCAAGAAG
GGCTGGGCTGGAATACAGGCAATTCCCAGGAAACTTTGGTTAGATAAATCTGGCAAACAT
TTGGTCCAATGGCCTGTTGTTGAAATCGAAAAGTTACGTGTAAACCAAGTGCAAGTACCT
AGCAAATTGCTGAAGGGAGGATCTGTGATTGAAGTTACTGGTGTTACTGCTGCTCAGGCA
GATGTTGAGATTTCATTTGATGTGAGTGATTTTAAGAAGGCAGAAAAGCTGGACCCAGGG
TGGACCAATCCACAGTTGCTTTGTAGCCAAAAGGGCGCATCAGTTAAAGGCGCTCTTGGT
CCATTTGGGCTGCTCGCTTTGGCTTCAAAAGATTTGAAAGAATACACAGCAGTGTTTTTC
AGAATATTCAAAGGCGAAGACAACAAGTTTGTGGTGCTTATGTGCAGTGACCAAAGCAGG
TCTTCCTTGAATAGTGATAATGATAAGACCACTTATGGCGCATTTCTGAATGTGGACCCA
GTTTATGAAAAGCTGTCGTTAAGGAGTCTGATTGATCATTCAATAGTGGAGAGCTTTGGT
GTTGGAGGCAAAGCCTGCATCACAGCTAGAGTGTATCCAACTTTGGCAATTGATGATTAT
GCCCACTTGTATGCATTCAATAATGGCACTGAGAATGTCAAAATCAACGGCCTGAGTGCC
TGGAGTATGAAGAAAGCTCAACTTTATTAA

Peptide Sequence

PEP ID

Cs1g18220.4
PEP Infomation
Sequence

MIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT
ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSF
RDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDF
FPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSG
LRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKH
LVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPG
WTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSR
SSLNSDNDKTTYGAFLNVDPVYEKLSLRSLIDHSIVESFGVGGKACITARVYPTLAIDDY
AHLYAFNNGTENVKINGLSAWSMKKAQLY*

Transcript Sequence

Transcript ID

Cs1g18220.4
Transcript Infomation

gene=Cs1g18220 CDS=116-1645
Sequence

TGATCTTATATACACAAACGGACGTTCATTTTTTAGCTAGATATATCTTTTCTTAATTCA
AAGTTGACTTATGAAAACTCCATTATTGTAATGGGTGTACATACCTTTAGGTGTTATGAT
TTACAAAGGAATTTATCACCTGTTCTACCAATACAACCCAAAAGGAGCAGTATGGGGCAA
CATTGTATGGGCTCACTCTACATCAAAGGACCTGATTAACTGGATCCCACATGATCCAGC
CATCTACCCATCACAGCAGTCCGATATCAACGGTTGCTGGTCGGGTTCAGCCACAATCCT
GCCTGGAGAAAAACCAGCCATTTTTTACACTGGAATTGACCCACATAACCGACAGGTCCA
AAACCTGGCCGTGCCAAAAAACTTATCTGATCCTTACCTTAGGGAATGGGTTAAGTCACC
AAAAAATCCATTGATGGCACCTGATGCCATGAATCAAATCAATACAAGCTCATTCAGAGA
CCCAACCACAGCATGGCTTGGCCCTGATAAGAGATGGAGAGTGATCATCGGCAGCAAAAT
TAACAGAAAAGGGTTAGCAATTTTGTACAGAAGCAAAGATTTTGTGCATTGGATTAAGGC
TAAACACCCTTTACATTCTGTTAAAGGCACAGGAATGTGGGAGTGTCCTGATTTTTTCCC
TGTTTCTACTTATGGCCTAAATGGTCTTGATACATCGGATATGGGACCCAACACTAAGCA
TGTGCTTAAGGTTAGCTTGGATGATACTAAGCATGAATATTACACAGTTGGAACATATAG
CACTGCTAAAGATAGATATGTTCCGGATGAGGGTTCCGTGGAGAGTGATTCAGGATTGAG
ATTTGATTACGGAAAATATTATGCTTCCAAGACTTTCTTTGATGGTGCCAAGAACAGGAG
GGTTTTGTGGGGTTGGGTTAATGAGTCATCAAGTGTTAATGATGATGTCAAGAAGGGCTG
GGCTGGAATACAGGCAATTCCCAGGAAACTTTGGTTAGATAAATCTGGCAAACATTTGGT
CCAATGGCCTGTTGTTGAAATCGAAAAGTTACGTGTAAACCAAGTGCAAGTACCTAGCAA
ATTGCTGAAGGGAGGATCTGTGATTGAAGTTACTGGTGTTACTGCTGCTCAGGCAGATGT
TGAGATTTCATTTGATGTGAGTGATTTTAAGAAGGCAGAAAAGCTGGACCCAGGGTGGAC
CAATCCACAGTTGCTTTGTAGCCAAAAGGGCGCATCAGTTAAAGGCGCTCTTGGTCCATT
TGGGCTGCTCGCTTTGGCTTCAAAAGATTTGAAAGAATACACAGCAGTGTTTTTCAGAAT
ATTCAAAGGCGAAGACAACAAGTTTGTGGTGCTTATGTGCAGTGACCAAAGCAGGTCTTC
CTTGAATAGTGATAATGATAAGACCACTTATGGCGCATTTCTGAATGTGGACCCAGTTTA
TGAAAAGCTGTCGTTAAGGAGTCTGATTGATCATTCAATAGTGGAGAGCTTTGGTGTTGG
AGGCAAAGCCTGCATCACAGCTAGAGTGTATCCAACTTTGGCAATTGATGATTATGCCCA
CTTGTATGCATTCAATAATGGCACTGAGAATGTCAAAATCAACGGCCTGAGTGCCTGGAG
TATGAAGAAAGCTCAACTTTATTAAAATAAGAAAAGGGTGGAGGAGTTGGAAGAAGACAA
ATAGAAGCAACTAGTGACATATGCAGTTAACAGATTCTTACGACTAAGCCATTATGTAAC
AAGCAAAAGGGTCATTTGTTTTTTCTGCAGAGTACCTTTTTTTCTAAAATATGTTTATAA
TTGGAGTAAAAGTGTATTTCTATTCCCATTGAATACTCTTGTTGTTATTCAGCTTGTTTG
TAGGCACCCAATAAAGAATATTAATTAAAATAAGTTTTACAGAAACTGTTGCTCTAGCTC
ATGCAGTGGGCTCTAAAGATCGAGAAT