Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g17990.1
CDS Infomation

gene=Cs1g17990
Sequence

ATGGAACCGCGCGTTGGAAACAAGTTTCGGTTGGGTCGAAAGATCGGTAGCGGGTCCTTT
GGAGAGATCTATCTAGGTACTAATATTCAGACTAATGAGGAAGTTGCAATTAAGCTTGAG
AATGTTAAAACAAAGCACCCTCAGCTGCAGTATGAAGCGAAGTTGTATAAAATATTACAA
GGCGGAACTGGAATTCCAAATCTGAGATGGTTTGGTGTTGAAGGTGACTATAATGTCCTC
GTAATAGATTTGTTGGGGCCTAGCCTTGAAGATTTATTTAACTTCTGCAGTAGGAAACTG
TCGCTGAAGACTGTCCTTATGCTCGCAGATCAGATGATCAATAGAGTCGAATTTGTTCAT
TCTAAGTCATTTCTACATCGGGATATCAAGCCAGATAACTTCCTAATGGGTTTAGGGAGG
CGTGCAAATCAGGTCTATATCATTGACTTTGGCTTGGCTAAGAGGTATAGAGACACTGCA
ACACATCAGCATATACCTTATAGAGAGAATAAGAATTTGACTGGAACCGCAAGATATGCG
AGCATGAATACTCACCTTGGCATTGAACAAAGCCGCAGGGACGATTTGGAATCGCTTGGA
TATGTTCTTATGTATTTTTTAAGAGGAAGTCTTCCATGGCAAGGATTGAAAGCAGGAACT
AAGAAGCAGAAGTATGAGAAGATCAGTGAGAAGAAAGTGTCAACTTCAATTGAGGCCTTA
TGTCGAGGTTATCCTACAGAATTTGCATCCTATTTTCATTACTGCCGGTCACTGCGATTT
GATGATAAACCAGATTATGCTTATTTGAAAAGACTCTTCCGTGACCTTTTTATACGTGAA
GGTTTCCAGTTTGATTATGTGTTTGATTGGACAATTTTGAAGTATCAGCAGTCACAAGTT
TCTACTCCTGCCCGTGCAATTGGTCCTGGAGCTGGACCAAGTAGTGGCATGCCTCCTGCT
GCTGCTAATGTTGATAGGCAATCGGGTGCTGAAGAAGGTAGACATACTGGTTGGTCATCA
GCAGATCCCTCTCGCAGGAGGAATTCTGGACCACTTGGAAATTCTGCAAACTTGTCCAAA
CAAAAGAGTCCAATGGCAAATGATCCAGCATTTTCTAAAGATGCCATGATGTCTAGTTAT
AACCTATTGCGATCAAGTGGATCATCAAGGCGAGTTGCTGTACCTAACAGTCGTGAAGCA
GCTGTGGTTGGGAGTGACACTGATCCCTCCCGTCCTCGCACCACAGATGCAAGCCCAGGA
GCATTTCAAAAGATTTCTAGTGGGCAAAGAAGTTCACCTGTTGTATCATCAGAAAACCGG
CATACAACTTCTGGCAGGAGCACATCAAACATCAAGAACTTTGAGTCCACTCTTAGAGGC
ATCGAGAGCCTGCATTTCAATAACAATGAAAGGGTACACCATTAG

Peptide Sequence

PEP ID

Cs1g17990.1
PEP Infomation
Sequence

MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLQYEAKLYKILQ
GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH
SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA
SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL
CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQV
STPARAIGPGAGPSSGMPPAAANVDRQSGAEEGRHTGWSSADPSRRRNSGPLGNSANLSK
QKSPMANDPAFSKDAMMSSYNLLRSSGSSRRVAVPNSREAAVVGSDTDPSRPRTTDASPG
AFQKISSGQRSSPVVSSENRHTTSGRSTSNIKNFESTLRGIESLHFNNNERVHH*

Transcript Sequence

Transcript ID

Cs1g17990.1
Transcript Infomation

gene=Cs1g17990 CDS=327-1751
Sequence

CAATCACAGCCCTTTAGTCTTCGATTGGATCAAAGCGGCAAAAAGCCCACAATCTAACTT
CAACGACACCACCACCAAACAACGAATGCTTTCTCATCTCTCTCTCTCTCTCTCTAGTCA
GAGAGAGAAAGTTTTCTTTTTAATTCCGCCCATGTCCCCAAACTCTCTTTTACCTCCGAT
CTTCATTTGGGCTTCTCCAATTCGGTGATCGAAATTCTCAGTTCGTTTTGTACGATCGGA
TTTTGTACAAAAGCTTTTGCCTTTTTGTTTTGGGTTTTAGTTTTTCTGGGGTTTTCAATT
TTTTTTTTAAATTTTTTGTTTTAATTATGGAACCGCGCGTTGGAAACAAGTTTCGGTTGG
GTCGAAAGATCGGTAGCGGGTCCTTTGGAGAGATCTATCTAGGTACTAATATTCAGACTA
ATGAGGAAGTTGCAATTAAGCTTGAGAATGTTAAAACAAAGCACCCTCAGCTGCAGTATG
AAGCGAAGTTGTATAAAATATTACAAGGCGGAACTGGAATTCCAAATCTGAGATGGTTTG
GTGTTGAAGGTGACTATAATGTCCTCGTAATAGATTTGTTGGGGCCTAGCCTTGAAGATT
TATTTAACTTCTGCAGTAGGAAACTGTCGCTGAAGACTGTCCTTATGCTCGCAGATCAGA
TGATCAATAGAGTCGAATTTGTTCATTCTAAGTCATTTCTACATCGGGATATCAAGCCAG
ATAACTTCCTAATGGGTTTAGGGAGGCGTGCAAATCAGGTCTATATCATTGACTTTGGCT
TGGCTAAGAGGTATAGAGACACTGCAACACATCAGCATATACCTTATAGAGAGAATAAGA
ATTTGACTGGAACCGCAAGATATGCGAGCATGAATACTCACCTTGGCATTGAACAAAGCC
GCAGGGACGATTTGGAATCGCTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGTCTTC
CATGGCAAGGATTGAAAGCAGGAACTAAGAAGCAGAAGTATGAGAAGATCAGTGAGAAGA
AAGTGTCAACTTCAATTGAGGCCTTATGTCGAGGTTATCCTACAGAATTTGCATCCTATT
TTCATTACTGCCGGTCACTGCGATTTGATGATAAACCAGATTATGCTTATTTGAAAAGAC
TCTTCCGTGACCTTTTTATACGTGAAGGTTTCCAGTTTGATTATGTGTTTGATTGGACAA
TTTTGAAGTATCAGCAGTCACAAGTTTCTACTCCTGCCCGTGCAATTGGTCCTGGAGCTG
GACCAAGTAGTGGCATGCCTCCTGCTGCTGCTAATGTTGATAGGCAATCGGGTGCTGAAG
AAGGTAGACATACTGGTTGGTCATCAGCAGATCCCTCTCGCAGGAGGAATTCTGGACCAC
TTGGAAATTCTGCAAACTTGTCCAAACAAAAGAGTCCAATGGCAAATGATCCAGCATTTT
CTAAAGATGCCATGATGTCTAGTTATAACCTATTGCGATCAAGTGGATCATCAAGGCGAG
TTGCTGTACCTAACAGTCGTGAAGCAGCTGTGGTTGGGAGTGACACTGATCCCTCCCGTC
CTCGCACCACAGATGCAAGCCCAGGAGCATTTCAAAAGATTTCTAGTGGGCAAAGAAGTT
CACCTGTTGTATCATCAGAAAACCGGCATACAACTTCTGGCAGGAGCACATCAAACATCA
AGAACTTTGAGTCCACTCTTAGAGGCATCGAGAGCCTGCATTTCAATAACAATGAAAGGG
TACACCATTAGCAGATTCCAAATCTCTTCCACTGTAAATTCTGTAATGCTACACTTTATC
ACTCCTATGGAGTGGAGCATCGTGTTGTTTGTGGAATGTGTTTTAGGGAGTCATAGTGCA
AAGTGCAAGATGGAAATTAGCACTGTAAGTACTCAATAAAGAAGAGGTAATCAAAGAAAA
CCACCTAGGTCAAATGCTTTTGTCTAAATACCTAGGTTTAATTAAGGCTGCTACCAAGTT
TACAGTTTGAGTTAAATGACACTGTCACTACTACTAGTGTCAAAAGTTCCGTGTCCTGTA
TGTCAATTGCAACTGTGTTTGTAGCTGAAGACCATATAGTGACTTGTAAAATTTTGACCA
GGCAATTGTCATGATCAATCATGATAACAAGAAAGGCCAGACCTTCTATTTGTAAGTATC
TCTCTTTTGTTGTGCTATAACTACTTATTTTTGCAGACAAAATCTCTGAGTCTCTAGAAA
CTTGAATTGATGTTCTCTGCATAATTTCTATTTCTTGAAAGAAAGCTTAACCCGGGCTTC
TTGTCAATCTTGCATGGGGTTTGGTTACTATAGAAGCTGTGTTATGCTTGTTGTGGATGT
TAGTACAGATACGAGAATCTCATTTCTCACACCGGGGGATGAAAAACTTTTACGTTTTAT
TTAAAGTTTGGTGCACAGAAGATCCTAAAGTTT