Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g17880.1
CDS Infomation

gene=Cs1g17880
Sequence

ATGAGAGAAGACGAAGAGACTCGTAGTAAGAAGGAGCACGAATCACAACAAGAACAAGAA
ACGGAAGGGCCCAAGAAAAAGAACAAGAAGAGAAAGAAAGACAAAGCCAACACAACAATT
GATGAACAGCCAGAGCCAGAGCTTGAGCCGGAGAGAGTCAAAGCCAAAGTACAGTTCATT
CCCGAGCAGCCCAACAAAGCCCCACCTCTAGTGGGATATTTCCCGTCCATCTACAAGCCT
GACGTTGACCACCCAGATGAAGAAATGCGGCCGAAAGTGAGAGTTTATAGGAACATGAAT
GAGAAGAAGAACAGAACTGGGAGGATGGAGTTGGTGGTCAGTCCACGCGACTCGAGCGTG
GACTATGTTGGCACTAGCTATTCCGGTGAGGCCATGGCGCCCCAGTTTTGTCACTATGCT
GTTGGGGTTCTTGATAGGAGTACCCAGACTTTGAAGATTGTGCCCATTGCTGCTAATAAG
ATATTTAGATTGGAGCCAAGAGTTAGAGGGTCAGATGTTGCTGACAAGGACGCAGGAAAG
GGGGAGATCTCTGCAGAAGTGCAAGCGAACATGAAGGCAATGCTTGATACACGTTATGGA
ACAAAGAAGTCTCTTAGACAGTCTAAAAAAATGCATGCTCTGAACAAGGAAAATGATCCT
GAATCTCAGAAGGATCTTGCACTGAAAATGAAGTCAGTCAAGATTAACAAGGAAGCTCTT
GAAAGTACCACTTCTGATACTGTTCTTAATGTCCCGCCATATGATGCTAATGCCACTACT
CCACAGCAGGCTTATCCTCTGGATAAAATTATTCTCAAAGGAGAGTGGGATTTCGTACAA
GATATTTTTAACCATGTGTCAGCAGGTTCGGAGGTGATAAGTGATGCTTACCCATCTTTT
GTTTGCAACAGAATACACAAATTGCGGGAAATTCAGGATGATGTAGAGAAGCAGACACTG
GCATCTATTTTCTCATACATCACTCATCTGGTGAAGTTCAAAGATCAGCATTCCATGGAT
GGAGGAGCCTCAGCGAAGCAACATAGAATCCCAAAGATTTTGCACCAGAAGTTTTTGACA
AGTTTTTCTGATGCAGAATCAAAAAGACTGTCGGATGACAAAATCCATCTGCTCATTAGT
TATGTCTTGGTTCTCACCCTACATGCTGATGATTTCAGAACTAACCCTACGGATATCGCC
AAGGATCTGAGGATGAGTGAATTTAAGTTGAGAGACCATTTTGAGAAGTTAGGGTGCAAG
CTATTACGCGAGAAAAACATGCTGTACGCTACCCTTCCTGTCCCTCTCCAATTTCCCAAG
GCAATTCAGAGGCGGCGACGCTAG

Peptide Sequence

PEP ID

Cs1g17880.1
PEP Infomation
Sequence

MREDEETRSKKEHESQQEQETEGPKKKNKKRKKDKANTTIDEQPEPELEPERVKAKVQFI
PEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPRDSSV
DYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSDVADKDAGK
GEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKINKEAL
ESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEVISDAYPSF
VCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILHQKFLT
SFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKLGCK
LLREKNMLYATLPVPLQFPKAIQRRRR*

Transcript Sequence

Transcript ID

Cs1g17880.1
Transcript Infomation

gene=Cs1g17880 CDS=82-1425
Sequence

CACAAAACCCTTAAAATGGGAAGAAAAACCTCAGACAGAAGCAGATTAGAGACGTTTTCT
CTCTGAAAGCTAACAGTCACCATGAGAGAAGACGAAGAGACTCGTAGTAAGAAGGAGCAC
GAATCACAACAAGAACAAGAAACGGAAGGGCCCAAGAAAAAGAACAAGAAGAGAAAGAAA
GACAAAGCCAACACAACAATTGATGAACAGCCAGAGCCAGAGCTTGAGCCGGAGAGAGTC
AAAGCCAAAGTACAGTTCATTCCCGAGCAGCCCAACAAAGCCCCACCTCTAGTGGGATAT
TTCCCGTCCATCTACAAGCCTGACGTTGACCACCCAGATGAAGAAATGCGGCCGAAAGTG
AGAGTTTATAGGAACATGAATGAGAAGAAGAACAGAACTGGGAGGATGGAGTTGGTGGTC
AGTCCACGCGACTCGAGCGTGGACTATGTTGGCACTAGCTATTCCGGTGAGGCCATGGCG
CCCCAGTTTTGTCACTATGCTGTTGGGGTTCTTGATAGGAGTACCCAGACTTTGAAGATT
GTGCCCATTGCTGCTAATAAGATATTTAGATTGGAGCCAAGAGTTAGAGGGTCAGATGTT
GCTGACAAGGACGCAGGAAAGGGGGAGATCTCTGCAGAAGTGCAAGCGAACATGAAGGCA
ATGCTTGATACACGTTATGGAACAAAGAAGTCTCTTAGACAGTCTAAAAAAATGCATGCT
CTGAACAAGGAAAATGATCCTGAATCTCAGAAGGATCTTGCACTGAAAATGAAGTCAGTC
AAGATTAACAAGGAAGCTCTTGAAAGTACCACTTCTGATACTGTTCTTAATGTCCCGCCA
TATGATGCTAATGCCACTACTCCACAGCAGGCTTATCCTCTGGATAAAATTATTCTCAAA
GGAGAGTGGGATTTCGTACAAGATATTTTTAACCATGTGTCAGCAGGTTCGGAGGTGATA
AGTGATGCTTACCCATCTTTTGTTTGCAACAGAATACACAAATTGCGGGAAATTCAGGAT
GATGTAGAGAAGCAGACACTGGCATCTATTTTCTCATACATCACTCATCTGGTGAAGTTC
AAAGATCAGCATTCCATGGATGGAGGAGCCTCAGCGAAGCAACATAGAATCCCAAAGATT
TTGCACCAGAAGTTTTTGACAAGTTTTTCTGATGCAGAATCAAAAAGACTGTCGGATGAC
AAAATCCATCTGCTCATTAGTTATGTCTTGGTTCTCACCCTACATGCTGATGATTTCAGA
ACTAACCCTACGGATATCGCCAAGGATCTGAGGATGAGTGAATTTAAGTTGAGAGACCAT
TTTGAGAAGTTAGGGTGCAAGCTATTACGCGAGAAAAACATGCTGTACGCTACCCTTCCT
GTCCCTCTCCAATTTCCCAAGGCAATTCAGAGGCGGCGACGCTAGATGGGTCATTATGAT
TTCTTAAAAGATATCAGCATCCCTGTCTGAATTCTTTTGCTGCTTTCTTTATCTTGACTG
ATGTTGTTGTATCTTTTTTGGTCATGTAGACATGGGTCAGTTTTGTGAAACTCAAGTTAA
AGGAATTGATTCAGTAATTTCTATTCATTAACTGATATGTTTTTGAGAGTTGTAAACAGA
AAACAAGCTTATCAACAAGTTCTGCATCTATATTTCTTATTCATAATCAAAAGATCCAAT
AGCCTAGAAGTTCAAGAGGGCACGATTCAATGAAAGTTGCACAAGATTCAAAACAACATT
ATAAAGTTCTCTTACCAGCTATAACTGCAACAGCTTAAATTTACATAAAGATATTTAGTT
ACCCAGATGCTAAGTAAATTATGTTATTAAGATGATACATTTGCTACAGCACATATTAAA
TTCTATTCTTGTACACACATTAAGCCCATGAGAAAAAGGAATGGACCAAAATATGTATTT
CATCATGAGATGTACCATATTCTAATATATAGGTGTATAGACTTGAAGTAGATGGCTGGT
GAACCTTATTCAAGATTTGCTCTTGAACTTCCTTTGAGCTTTCAGGTCCACAACAATCAC
AGAGATGTTATCTTTGCTTCCCTTTTGAAGGGCAAGCATTGAAAGGTATTCTGCTGCTGC
TTGAGCTGCAGGATCAATTTCTTTTCCCCTTTCCACAAGGGGGGGAGCCCCATGCTTTTT
GTGCCAGAGCAGAATCCGCTTTCGTGCAACTTCACAAGCTTCCTCATTTGTCATGACGTC
CCATAAACCATCACTTGCCAAAATAAGGCATTCATCATCTCTTGCTCGCGGAATAAACAC
GACTTCTGGTTCAGGAATGATCCATGGTTTCAAGTACCTATCACCTGTGAAATACAGATG
CAAAAAATGTGTAAACATGACTTGCTCCAGGAATAAACATGACTTGATGTAAGAATCTAA
TAAAACTGCATTTAATATGTAATTAATTTCCATGTTCAAATAGAATTTAAGGTTTT