Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g17680.1
CDS Infomation

gene=Cs1g17680
Sequence

ATGGGGATTATTGAAAAGATTAAAGAAATTGAAGCCGAGATGGCTCGTACCCAGAAAAAT
AAAGCCACAGAGTATCATCTTGGCCAGCTCAAAGCAAAGATTGCAAAACTGAGAACTCAA
CTGTTGGAGCCTCCAAAAGGCTCTAGTGGTGCTGGAGAAGGTTTTGAAGTTACAAAGTTT
GGTCATGGACGTGTTGCACTCATAGGCTTTCCCAGTGTGGGAAAGTCTACCCTTTTAACT
TTATTGACGGGCACTCATTCAGAAGCTGCATCTTATGAGTTTACAACACTGACCTGCATT
CCTGGGATCATACACTACAATGATACTAAAATTCAGCTTCTTGATCTTCCCGGAATTATT
GAAGGTGCTTCTGAAGGCAAGGGACGTGGAAGGCAGGTCATTGCTGTTTCCAAATCTTCA
GACATTGTGTTGATGGTTCTTGATGCCTCAAAAAGTGAAGGTCATCGACAAATATTGACA
AAAGAACTGGAAGCTGTAGGACTACGTTTAAACAAGAGACCACCTCAAATTTATTTCAAG
AAGAAAAAAACTGGAGGCATTTCGTTCAACAGCACTTTACCTTTAACTCATGTGGATGAG
AAGCTCTGTTACCAAATTCTACATGAATATAAAATTCACAATGCAGAGGTGCTATTTCGA
GAGGATGCCACAGTGGATGATTTGATAGATGTCATTGAAGGAAACCGTAAATACATGAAG
TGTGTATATGTTTACAATAAGATAGATGTTATTGGTATTGATGACGTGGATAAGTTAGCC
CGCCAGCCAAATTCTGTCGTTATTAGCTGCAATCTGAAGTTGAACTTAGACAGACTGCTT
GCAAGGATGTGGGAAGAGATGGGACTTGTGAGAGTTTATACGAAGCCACAAGGCCAGCAA
CCTGATTTCACTGAACCTGTAGTTCTATCTGTTGATAGAGGTGGCTGCACAGTGGAAGAC
TTCTGTAATCACATACACAGGAGTTTGGTGAAGGATGTAAAATATGTGCTAGTCTGGGGT
ACAAGTGCAAGGCACTATCCACAGCACTGTGGCCTTGGTCATGTTCTTCAAGATGAGGAT
GTGGTTCAGATTGTTAAGAAAAAGGAAAAGGAAGAGGGAGGGAGAGGGCGGTTTAAATCT
CATTCGAATGCCCCTGCACGAATATCTGACAGAGAGAAGAAGGCTCCCTTGAAAACATGA

Peptide Sequence

PEP ID

Cs1g17680.1
PEP Infomation
Sequence

MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGAGEGFEVTKF
GHGRVALIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII
EGASEGKGRGRQVIAVSKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK
KKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDLIDVIEGNRKYMK
CVYVYNKIDVIGIDDVDKLARQPNSVVISCNLKLNLDRLLARMWEEMGLVRVYTKPQGQQ
PDFTEPVVLSVDRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLGHVLQDED
VVQIVKKKEKEEGGRGRFKSHSNAPARISDREKKAPLKT*

Transcript Sequence

Transcript ID

Cs1g17680.1
Transcript Infomation

gene=Cs1g17680 CDS=152-1351
Sequence

CCGTCTCGCTCTCCCACAGATACTCGGAAGAAAAGTGGCATCTCTGTCTTCTCCTCTCCC
TCTCCCCTCTCTCTCTCTCTTACTCTGTCAGCTGCTGCGGCTACGATCTGCGTTAACTCA
AGAGTACCCGCTGAAATAAAGAAATAAAGAAATGGGGATTATTGAAAAGATTAAAGAAAT
TGAAGCCGAGATGGCTCGTACCCAGAAAAATAAAGCCACAGAGTATCATCTTGGCCAGCT
CAAAGCAAAGATTGCAAAACTGAGAACTCAACTGTTGGAGCCTCCAAAAGGCTCTAGTGG
TGCTGGAGAAGGTTTTGAAGTTACAAAGTTTGGTCATGGACGTGTTGCACTCATAGGCTT
TCCCAGTGTGGGAAAGTCTACCCTTTTAACTTTATTGACGGGCACTCATTCAGAAGCTGC
ATCTTATGAGTTTACAACACTGACCTGCATTCCTGGGATCATACACTACAATGATACTAA
AATTCAGCTTCTTGATCTTCCCGGAATTATTGAAGGTGCTTCTGAAGGCAAGGGACGTGG
AAGGCAGGTCATTGCTGTTTCCAAATCTTCAGACATTGTGTTGATGGTTCTTGATGCCTC
AAAAAGTGAAGGTCATCGACAAATATTGACAAAAGAACTGGAAGCTGTAGGACTACGTTT
AAACAAGAGACCACCTCAAATTTATTTCAAGAAGAAAAAAACTGGAGGCATTTCGTTCAA
CAGCACTTTACCTTTAACTCATGTGGATGAGAAGCTCTGTTACCAAATTCTACATGAATA
TAAAATTCACAATGCAGAGGTGCTATTTCGAGAGGATGCCACAGTGGATGATTTGATAGA
TGTCATTGAAGGAAACCGTAAATACATGAAGTGTGTATATGTTTACAATAAGATAGATGT
TATTGGTATTGATGACGTGGATAAGTTAGCCCGCCAGCCAAATTCTGTCGTTATTAGCTG
CAATCTGAAGTTGAACTTAGACAGACTGCTTGCAAGGATGTGGGAAGAGATGGGACTTGT
GAGAGTTTATACGAAGCCACAAGGCCAGCAACCTGATTTCACTGAACCTGTAGTTCTATC
TGTTGATAGAGGTGGCTGCACAGTGGAAGACTTCTGTAATCACATACACAGGAGTTTGGT
GAAGGATGTAAAATATGTGCTAGTCTGGGGTACAAGTGCAAGGCACTATCCACAGCACTG
TGGCCTTGGTCATGTTCTTCAAGATGAGGATGTGGTTCAGATTGTTAAGAAAAAGGAAAA
GGAAGAGGGAGGGAGAGGGCGGTTTAAATCTCATTCGAATGCCCCTGCACGAATATCTGA
CAGAGAGAAGAAGGCTCCCTTGAAAACATGATTACATAAGTGGGCACTGCAATGCAGCCT
TTGGTCAGACATAAGGGCTTAAGAAACAATTGGTAGTAGAATTAAAAAAAAAAAGACACA
ATTGGTAGTGTAAACTGAGTGACCATAGTCAAGAGGAGGTATTGTTGAGTCTGATGTCCA
GAATACAGAATTTTGCGGCAGGCTGTACTTCTAATTTTATTTTCTATATGGGTGTCCAAT
TAGATCCTTCAGTTTAATGTACTTGATTGTAATGTTATATTGTGGAATTACAATGACAAA
ACATTTGAATGTAGACCACTCAGTTTCATTATATTTTCTTGAGCAACGCTTCAGGAGAAA
TACATGCACCAAGTAGACAATATCATATTCATGAAAAATATAGTTAATTCTTAATTTATC
TCAACTTGATATCCAGCTACAGCCAGGAGATTTCTTCTTTTCTGTCTCACTTATCATCAT
CTTCACTATCTCTGAGTCTTTCCACTTACCCATTGATGCATAAATATTAGCTAAAAGTGC
AGAGTTCCCTGTTTTCTCAGGCTCAAGTTCCAGGAGATGCCTGGCTGCAATCTCACCCAA
TTCAGCATTAACATGAACCTTACAAGCT