Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g16550.1
CDS Infomation

gene=Cs1g16550
Sequence

ATGACCCGCATAAAAGAATTCTTCACAAAACTTTCTGAATCTTCTACCAACCAAAACATT
TCCAATATTCCCAAGAAAAAAAAGAAACTATTCTTAGCTCTTTTTGCAACGCTACTCGTT
GTCGCTGCCGTAATCGGCATTGTCGCCGGAGTGAACTCAAGAAAAAACTCCGGCGACAAC
GGCAACGAGCCTCATCATGCTATCCTCAAATCATCATGTAGCAGCACAAGGTACCCGGAC
TTATGCTTTTCGGCTATTGCTGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAAAAG
GACGTTATTGAGATGTCCTTAAACATCACAACAACAGCCGTGGAACACAACTACTTCGGG
ATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAACGGGAAAAGGTTGCTCTCCATGAC
TGTCTTGAGACGATCGATGAGACTCTTGATGAGTTACACAAAGCCGTCGAGGATCTTGAG
GAGTACCCGAACAAGAAATCTTTATCACAGCATGCGGATGATCTCAAAACCCTAATGAGT
GCCGCGATGACCAATCAGGGGACGTGTCTTGATGGGTTCTCTCATGATGATGCTAATAAG
CACGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTAGCAATGCG
CTTGCTATGATCAAGAACATGACTGACACTGACATGATGATCATGAGGACTTCAAACAAC
AGGAAGCTGATAGAGGAGACCAGTACGGTTGATGGGTGGCCGGCGTGGCTGTCCACCGGA
GACAGGAGGCTGTTGCAGTCCTCGTCGGTGACACCGAACGTGGTGGTGGCAGCAGATGGC
AGCGGAAACTTTAAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAG
CGGTATATTATTAGGATTAAAGCCGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAG
CATAAAAATATAATGTTCATCGGTGACGGGAGGACTAGAACTATCATCACAGGAAGTAGA
AATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGA
TTCTTGGCCCGAGACATTACATTCCAAAACACAGCCGGCCCCTCAAAGCACCAGGCGGTG
GCACTACGAGTGGGAGCTGACCTTTCAGCATTTTACAATTGCGATATGTTAGCTTACCAA
GACACACTCTACGTCCACTCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACG
GTTGATTTTATTTTTGGTAACGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGA
AAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGGCTGACCCTAACCAA
AACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTAAAACCGGTT
CAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGAGTACTCGAGGACGGTGATC
ATGCAGTCATCGATTACTGACGTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAAC
TTCGCGTTGAACACATTGTTTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGAACT
TCAGGGAGAGTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAGGCTCAAGCT
TTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGGCTCCACTGGTTTCCCATTC
TCCCTTGGTTTGTAA

Peptide Sequence

PEP ID

Cs1g16550.1
PEP Infomation
Sequence

MTRIKEFFTKLSESSTNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDN
GNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFG
IQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMS
AAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNN
RKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTVAAAVAAAPQGGTK
RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEG
FLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGT
VDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPV
QGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGT
SGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL*

Transcript Sequence

Transcript ID

Cs1g16550.1
Transcript Infomation

gene=Cs1g16550 CDS=84-1838
Sequence

AAACACCCTCTTCCTTCACTCATTCGTTCATTCACTGTCCAATCCATAATCTTATCTTTT
GTTCTCTCTTATCGAGAAAAAAAATGACCCGCATAAAAGAATTCTTCACAAAACTTTCTG
AATCTTCTACCAACCAAAACATTTCCAATATTCCCAAGAAAAAAAAGAAACTATTCTTAG
CTCTTTTTGCAACGCTACTCGTTGTCGCTGCCGTAATCGGCATTGTCGCCGGAGTGAACT
CAAGAAAAAACTCCGGCGACAACGGCAACGAGCCTCATCATGCTATCCTCAAATCATCAT
GTAGCAGCACAAGGTACCCGGACTTATGCTTTTCGGCTATTGCTGCCGTTCCAGAGGCCT
CCAAAAAGGTGACAAGCCAAAAGGACGTTATTGAGATGTCCTTAAACATCACAACAACAG
CCGTGGAACACAACTACTTCGGGATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAAC
GGGAAAAGGTTGCTCTCCATGACTGTCTTGAGACGATCGATGAGACTCTTGATGAGTTAC
ACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTTTATCACAGCATGCGG
ATGATCTCAAAACCCTAATGAGTGCCGCGATGACCAATCAGGGGACGTGTCTTGATGGGT
TCTCTCATGATGATGCTAATAAGCACGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATG
TTGAGAAGATGTGTAGCAATGCGCTTGCTATGATCAAGAACATGACTGACACTGACATGA
TGATCATGAGGACTTCAAACAACAGGAAGCTGATAGAGGAGACCAGTACGGTTGATGGGT
GGCCGGCGTGGCTGTCCACCGGAGACAGGAGGCTGTTGCAGTCCTCGTCGGTGACACCGA
ACGTGGTGGTGGCAGCAGATGGCAGCGGAAACTTTAAGACGGTGGCGGCAGCGGTGGCGG
CGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAAGCCGGTGTTTATCGGG
AAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGGAGGACTA
GAACTATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTA
CAGTTGCTGTTGTTGGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCCG
GCCCCTCAAAGCACCAGGCGGTGGCACTACGAGTGGGAGCTGACCTTTCAGCATTTTACA
ATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGTTCTTTG
TGAACTGCTTAATTGCTGGCACGGTTGATTTTATTTTTGGTAACGCTGCAGCCGTGTTAC
AAAATTGTGACATCCATGCACGAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCC
AAGGCAGGGCTGACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTG
CCACCTCCGATTTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGA
AGGAGTACTCGAGGACGGTGATCATGCAGTCATCGATTACTGACGTGATCCACCCTGCCG
GGTGGCACGAGTGGGATGGTAACTTCGCGTTGAACACATTGTTTTACGGAGAGCATCAGA
ACGCCGGAGCCGGTGCCGGAACTTCAGGGAGAGTGAAATGGAAGGGATTTAGGGTTATTA
CAAGTGCTACCGAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGC
TGGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAGTTTTAATTA
ATATGTTTTGTATTAGTGGATCCATAGGTCTCTGGTCTTTCAATTTGTAATATTTGATTG
AGCGTGTCTTATTCGTGGCTTCGATTTCACAAATACTATTGTGTGATTAACAAGAAATAA
AATAGCATGGGAAGAATAATAATTTCCGGCTTCTTTAAATTAAAGCATCTTCAACATCAA
TCTTGGCCACACAATAAAATCATTCGTCGCGTTCTTGACCAAACATCATGTCTATATACC
AGAGAT