Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g16180.1
CDS Infomation

gene=Cs1g16180
Sequence

ATGAAACCTCAACTAGTCTTCTTTCTAGCCTTCCTTTTCTTGTTCTCCCTTTCTGAAGGC
CTAAACCCTATATGTGACACCCAAGACCATAGCTCAACTCTCCAAGTTTTTCATGTTTTC
AGCCCATGCTCTCCTTTTAAGCCGTCAAAGCCACTTTCATGGGAAGAAAGTGTGCTCGAA
ATGCTGGCCAAAGATCAGGCACGGCTGCAGTTCTTGTCCAGCCTTGCTGTCGCTCGGAAA
TCTGTTGTGCCCATAGCCTCTGGCAGGCAGATCACCCAAAGCCCTACTTATATTGTTAGG
GCAAAAATTGGGACACCGGCACAAACCTTGCTCATGGCCATGGATACTAGCAATGATGCT
GCTTGGGTTCCATGCACTGGCTGTGTTGGCTGCTCTTCCACTGTTTTTAATTCTGCTCAA
TCCACCACATTCAAAAACCTTGGTTGCCAAGCTGCTCAATGCAAGCAGGTACCTAATCCC
ACCTGCGGGGGTGGCGCGTGTGCATTCAATTTGACCTACGGCAGCTCCACCATTGCCGCA
AACCTCTCACAGGACACTATCTCCCTGGCCACTGATATAGTCCCTGGTTACACCTTCGGC
TGCATCCAAAAGGCCACGGGCAACTCGGTGCCGCCCCAAGGCCTGTTGGGCCTGGGTCGT
GGCTCATTATCCCTTTTGGCACAAACACAGAACCTCTATCAGTCCACTTTTTCTTACTGT
TTGCCCAGCTTCAAGGCACTTAGCTTTTCTGGGTCATTAAGATTAGGACCCATTGGTCAG
CCCAAGCGGATTAAGTATACACCATTGCTTAAAAACCCAAGAAGATCATCACTTTACTAT
GTTAATTTGTTGGCCATTAGGGTTGGCAGAAGAGTTGTTGATATCCCACCTGGTGCCTTA
CAGTTCAATCCCACAACCGGCGCTGGCACTATTATTGATTCTGGCACAGTTTTTACCAGA
CTGGTGGCGCCAGCTTACACCGCAGTGAGAGACGTGTTCCGTAGACGTGTAGGGAGTAAC
TTAACAGTGACATCCCTAGGCGGATTCGACACGTGCTACTCGGTCCCAATCGTTGCGCCG
ACAATCACGTTGATGTTCTCAGGCATGAACGTGACTCTACCACAAGACAACCTTCTAATC
CACAGCACTGCAGGGAGCATCACATGCTTGGCCATGGCTGCAGCTCCAGACAACGTCAAC
TCAGTGCTTAATGTCATTGCCAATATGCAGCAACAAAACCACAGAATCCTCTATGATGTG
CCCAATTCAAGGCTCGGTGTCGCCCGTGAGCTTTGCACTTAG

Peptide Sequence

PEP ID

Cs1g16180.1
PEP Infomation
Sequence

MKPQLVFFLAFLFLFSLSEGLNPICDTQDHSSTLQVFHVFSPCSPFKPSKPLSWEESVLE
MLAKDQARLQFLSSLAVARKSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDA
AWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLTYGSSTIAA
NLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSLSLLAQTQNLYQSTFSYC
LPSFKALSFSGSLRLGPIGQPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGAL
QFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVPIVAP
TITLMFSGMNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDV
PNSRLGVARELCT*

Transcript Sequence

Transcript ID

Cs1g16180.1
Transcript Infomation

gene=Cs1g16180 CDS=237-1538
Sequence

AAGATATGTAGCAAAGATACCATCTCTAGGTAGATTTGACATCATGTGGGAGGGGCCAGC
CTACAAAGGCAAATGCAAATGGAGTACAGTCTGTTAGCGAAGACTCTCACACACTCACTG
CTAGATCCTCATACATCCCATACTTGCTCTCCTATATATATAATCGCACTCACTCAAGCT
CTATCACTCAACTCACAAAAACCCAAAAGGAAGAAGAAAAAAAAAAATTCAAAGCCATGA
AACCTCAACTAGTCTTCTTTCTAGCCTTCCTTTTCTTGTTCTCCCTTTCTGAAGGCCTAA
ACCCTATATGTGACACCCAAGACCATAGCTCAACTCTCCAAGTTTTTCATGTTTTCAGCC
CATGCTCTCCTTTTAAGCCGTCAAAGCCACTTTCATGGGAAGAAAGTGTGCTCGAAATGC
TGGCCAAAGATCAGGCACGGCTGCAGTTCTTGTCCAGCCTTGCTGTCGCTCGGAAATCTG
TTGTGCCCATAGCCTCTGGCAGGCAGATCACCCAAAGCCCTACTTATATTGTTAGGGCAA
AAATTGGGACACCGGCACAAACCTTGCTCATGGCCATGGATACTAGCAATGATGCTGCTT
GGGTTCCATGCACTGGCTGTGTTGGCTGCTCTTCCACTGTTTTTAATTCTGCTCAATCCA
CCACATTCAAAAACCTTGGTTGCCAAGCTGCTCAATGCAAGCAGGTACCTAATCCCACCT
GCGGGGGTGGCGCGTGTGCATTCAATTTGACCTACGGCAGCTCCACCATTGCCGCAAACC
TCTCACAGGACACTATCTCCCTGGCCACTGATATAGTCCCTGGTTACACCTTCGGCTGCA
TCCAAAAGGCCACGGGCAACTCGGTGCCGCCCCAAGGCCTGTTGGGCCTGGGTCGTGGCT
CATTATCCCTTTTGGCACAAACACAGAACCTCTATCAGTCCACTTTTTCTTACTGTTTGC
CCAGCTTCAAGGCACTTAGCTTTTCTGGGTCATTAAGATTAGGACCCATTGGTCAGCCCA
AGCGGATTAAGTATACACCATTGCTTAAAAACCCAAGAAGATCATCACTTTACTATGTTA
ATTTGTTGGCCATTAGGGTTGGCAGAAGAGTTGTTGATATCCCACCTGGTGCCTTACAGT
TCAATCCCACAACCGGCGCTGGCACTATTATTGATTCTGGCACAGTTTTTACCAGACTGG
TGGCGCCAGCTTACACCGCAGTGAGAGACGTGTTCCGTAGACGTGTAGGGAGTAACTTAA
CAGTGACATCCCTAGGCGGATTCGACACGTGCTACTCGGTCCCAATCGTTGCGCCGACAA
TCACGTTGATGTTCTCAGGCATGAACGTGACTCTACCACAAGACAACCTTCTAATCCACA
GCACTGCAGGGAGCATCACATGCTTGGCCATGGCTGCAGCTCCAGACAACGTCAACTCAG
TGCTTAATGTCATTGCCAATATGCAGCAACAAAACCACAGAATCCTCTATGATGTGCCCA
ATTCAAGGCTCGGTGTCGCCCGTGAGCTTTGCACTTAGATATAGAATTGTGAGATATGTT
TGTACTTGTTTTCTCTTTTTCTTGTGGGTCCTGTAATGGGTAATTTTAGCCGCGTGAGGT
TTGTTTGTCATTATTGCTAATTAACTTTTTATGGGAGGAATTGTGGGGACTCTAATGAGA
CCCAAATAAAATTATTTTGTACCTTTTTGTCACGGGTTCTCTGTATTTTTGTCTCTTTCT
TTTTTGGATTCATCGATAAGAAAAATGGAGTATGTATTGTTGATTGGTTCTACTTT