Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g15320.2
CDS Infomation

gene=Cs1g15320
Sequence

ATGGAGGAAGCAATTTCAGATCAAAGAGAAACGAGGCAACAGGAAGAAGCAGCTAATAAC
GTTCAAGAGAGAAGAAGAAAGGGTGGCCTCATTACCATGCCATTTATTATAGCAAATGAG
GCATTTGAGAAGGTGGCAAGCTATGGGCTGGTGACAAACATGATACTGTACTTGATGAAA
GACTATCATTTGGGAGTTGCAAAGGGCACAAATGTGCTTTTCTTCTGGACCGCTGCTACC
AATTTCATGCCTATTTTGGGCGCTTTTCTTTCTGATTCTTATCTGGGTCGATTCCTGACC
ATTGGCTTGGCTTCCTTCTGCAGTCTCCTGGGGATGTTTCTCCTATGGTTAACAGCAATG
ATTCCGAAAGTAAAACCTTCACCGTGCAACATATTAACCCAGAGCTGTGAATCCCCGACC
ACAGCTCAAATGACACTTCTGATCTCTTCTTTTTGTTTCATATCCATTGGAGCTGGTGGC
ATTAGGCCATGCTCCATAGCATTCGGAGCTGATCAATTGGACAGAAAAGATAATCCCAAC
AATGAGAGGGTCTTAGAAAGCTTCTTTGGTTGGTACTACGCTACATCAGCTATAGCCGTC
GTGATTGCATTGACTGCCATCGTTTACATTCAAGATCATCTTGGATGGAAAGTTGGTTTC
GGAGTTCCTGCAATCCTTATGGTGTTGTCTCTTTTACTGTTCTTCATTGCTTCTCCCTTG
TATGTCAAGCTGAAAGCAAGCAGTAGCTTATTAACTGGCTTTGCACAAGTTGCTGTTGTT
GCTTACAAGAACAGAAAACTTGCCCTGCCACCGCCAAATGCTAGTTGGTGTTACCATCGC
CAGAAGGACTCTCTGCTCATTGTGCCAACTAGCAAATTGCGGTTTTTGAATAAAGCTTGC
CTCATTAGAAATCCAGAACAAGACATTGCCCCAGATGGATCAGCTTTAAATCCATGGAGT
CTTTGCACGATTGAGCAAGTAGAAGAGCTCAAAGCACTCATTAAGGTCTTGCCATTGTGG
TCCACGGGGATAATGATGTCGATCAACATTAGCCAAAACTCATTTCCATTGCTGCAAGCT
AGTTCCATGGATCGACATGTTACTTCAAGCTTCCAGATTCCCGCAGGCTCTTTCGGCACG
TTCACAATAATTACTTTAGCAGCATGGGTAGTCCTCTACGATCGTGTTTTAATTCCAGTG
GCATCAAAGATGAAGGGTAAACCAGTGAGGCTTGGTGTTAAACTAAGAATGGGAATTGGA
CTATTTCTCTCATGCATGGGAATGGTAGTTTCAGGACTTGTTGAGAATATTAGACGAAGA
AGAGCTATCCGAGAAGGTTACCTGAACAATGGTCAAGCCGTGTTGGAAATGTCAGCAATG
TGGCTTGTGCCACAGCATTGCTTGAACGGCTTAGCAGAAGCATTCAATGCAATTGCGCAA
ACAGAGTTCTTTTACTCAGAGTTCCCAAAGAGTATGTCAAGTATAGCTGCCTCCCTGTTT
GGTCTAGGGATGGCTGTGGCAAACTTGTTAGCTAGTGCTATAGTAAGTGCCGTGGATGAT
ATCACTTCAAAAGGAGGGAAAGAGAGCTGGGTATCGAGCAATATCAACAAGGGTCGTTAC
GACAATTACTATTGGCTTCTTGCTATAATGAGTCTTGTTAATTTGGTATACTTCCTCGTG
TGTAGTTGGGCATATGGACCTTGTGTTGACCGTGTAACGAGTGTTGGAGATGAAGGGAAT
GACGTAAAGGATGAAGAAGAAGAGCTACTTCATTTAGGCAATAGCCGAGTTGGCAATGAA
GGAAACGGCTTAAAGAAGGAAGAAAGTTTCTCATAG

Peptide Sequence

PEP ID

Cs1g15320.2
PEP Infomation
Sequence

MEEAISDQRETRQQEEAANNVQERRRKGGLITMPFIIANEAFEKVASYGLVTNMILYLMK
DYHLGVAKGTNVLFFWTAATNFMPILGAFLSDSYLGRFLTIGLASFCSLLGMFLLWLTAM
IPKVKPSPCNILTQSCESPTTAQMTLLISSFCFISIGAGGIRPCSIAFGADQLDRKDNPN
NERVLESFFGWYYATSAIAVVIALTAIVYIQDHLGWKVGFGVPAILMVLSLLLFFIASPL
YVKLKASSSLLTGFAQVAVVAYKNRKLALPPPNASWCYHRQKDSLLIVPTSKLRFLNKAC
LIRNPEQDIAPDGSALNPWSLCTIEQVEELKALIKVLPLWSTGIMMSINISQNSFPLLQA
SSMDRHVTSSFQIPAGSFGTFTIITLAAWVVLYDRVLIPVASKMKGKPVRLGVKLRMGIG
LFLSCMGMVVSGLVENIRRRRAIREGYLNNGQAVLEMSAMWLVPQHCLNGLAEAFNAIAQ
TEFFYSEFPKSMSSIAASLFGLGMAVANLLASAIVSAVDDITSKGGKESWVSSNINKGRY
DNYYWLLAIMSLVNLVYFLVCSWAYGPCVDRVTSVGDEGNDVKDEEEELLHLGNSRVGNE
GNGLKKEESFS*

Transcript Sequence

Transcript ID

Cs1g15320.2
Transcript Infomation

gene=Cs1g15320 CDS=500-2335
Sequence

TGGCGATGTTCACTCAAGCTGCAACAAAAGAAAAGCAAAAGGGCGAAGTGGCCCATCTGA
TTACCGTGAGACCTGCCACACCATATCCCAAAAAAGGAGTATGATGATTGATGATTTGTA
GGTGTACTACTCTCCCTCCCTCCCTCTTGATTCTTTTTTATTTCAAAAGTTGTTTTTTAT
TTTCTAAAAAATAAAAGAAAAAGAATGATGTAAAGTTAAGGTGATGTGAACTACAAGAAA
AGCTGCTAACATCATGGTATGTTCCGCTCGCCTCAATTATTTGTTTTTTTTTTAATATTA
TTATTTAATTATTATTTGTTTTTTCACTTTTTCGGCACTGGACTGAAACAAGAAAGTGGG
TTTCCTATTTATTACACGCAATAAGATTATAAGAAGATCTTTGTCTGAAACCAATGCTAC
TATAAAATCTCCCAAGGCTAGCTCTTTTTCATGCTAGATTTGGTTCTCTCTCTTAAAGCT
ATAAGCTAAAGTTTCAACAATGGAGGAAGCAATTTCAGATCAAAGAGAAACGAGGCAACA
GGAAGAAGCAGCTAATAACGTTCAAGAGAGAAGAAGAAAGGGTGGCCTCATTACCATGCC
ATTTATTATAGCAAATGAGGCATTTGAGAAGGTGGCAAGCTATGGGCTGGTGACAAACAT
GATACTGTACTTGATGAAAGACTATCATTTGGGAGTTGCAAAGGGCACAAATGTGCTTTT
CTTCTGGACCGCTGCTACCAATTTCATGCCTATTTTGGGCGCTTTTCTTTCTGATTCTTA
TCTGGGTCGATTCCTGACCATTGGCTTGGCTTCCTTCTGCAGTCTCCTGGGGATGTTTCT
CCTATGGTTAACAGCAATGATTCCGAAAGTAAAACCTTCACCGTGCAACATATTAACCCA
GAGCTGTGAATCCCCGACCACAGCTCAAATGACACTTCTGATCTCTTCTTTTTGTTTCAT
ATCCATTGGAGCTGGTGGCATTAGGCCATGCTCCATAGCATTCGGAGCTGATCAATTGGA
CAGAAAAGATAATCCCAACAATGAGAGGGTCTTAGAAAGCTTCTTTGGTTGGTACTACGC
TACATCAGCTATAGCCGTCGTGATTGCATTGACTGCCATCGTTTACATTCAAGATCATCT
TGGATGGAAAGTTGGTTTCGGAGTTCCTGCAATCCTTATGGTGTTGTCTCTTTTACTGTT
CTTCATTGCTTCTCCCTTGTATGTCAAGCTGAAAGCAAGCAGTAGCTTATTAACTGGCTT
TGCACAAGTTGCTGTTGTTGCTTACAAGAACAGAAAACTTGCCCTGCCACCGCCAAATGC
TAGTTGGTGTTACCATCGCCAGAAGGACTCTCTGCTCATTGTGCCAACTAGCAAATTGCG
GTTTTTGAATAAAGCTTGCCTCATTAGAAATCCAGAACAAGACATTGCCCCAGATGGATC
AGCTTTAAATCCATGGAGTCTTTGCACGATTGAGCAAGTAGAAGAGCTCAAAGCACTCAT
TAAGGTCTTGCCATTGTGGTCCACGGGGATAATGATGTCGATCAACATTAGCCAAAACTC
ATTTCCATTGCTGCAAGCTAGTTCCATGGATCGACATGTTACTTCAAGCTTCCAGATTCC
CGCAGGCTCTTTCGGCACGTTCACAATAATTACTTTAGCAGCATGGGTAGTCCTCTACGA
TCGTGTTTTAATTCCAGTGGCATCAAAGATGAAGGGTAAACCAGTGAGGCTTGGTGTTAA
ACTAAGAATGGGAATTGGACTATTTCTCTCATGCATGGGAATGGTAGTTTCAGGACTTGT
TGAGAATATTAGACGAAGAAGAGCTATCCGAGAAGGTTACCTGAACAATGGTCAAGCCGT
GTTGGAAATGTCAGCAATGTGGCTTGTGCCACAGCATTGCTTGAACGGCTTAGCAGAAGC
ATTCAATGCAATTGCGCAAACAGAGTTCTTTTACTCAGAGTTCCCAAAGAGTATGTCAAG
TATAGCTGCCTCCCTGTTTGGTCTAGGGATGGCTGTGGCAAACTTGTTAGCTAGTGCTAT
AGTAAGTGCCGTGGATGATATCACTTCAAAAGGAGGGAAAGAGAGCTGGGTATCGAGCAA
TATCAACAAGGGTCGTTACGACAATTACTATTGGCTTCTTGCTATAATGAGTCTTGTTAA
TTTGGTATACTTCCTCGTGTGTAGTTGGGCATATGGACCTTGTGTTGACCGTGTAACGAG
TGTTGGAGATGAAGGGAATGACGTAAAGGATGAAGAAGAAGAGCTACTTCATTTAGGCAA
TAGCCGAGTTGGCAATGAAGGAAACGGCTTAAAGAAGGAAGAAAGTTTCTCATAGTCCAG
GGAATTGGCAGCATGATTTGAATTCAATCGGTTTGATATGATTTGTTTTACTGAATGTAT
GTATAATTATGCGACTGGGTGGAGAAAGTAACTAGGATTATAGATTTATGAACTCTTTTT
AGTCTGGTGTTTGCTCTACAAATTGTCTCTTACATAGCAATTATCATATACTTCTTCAAC
TGCTATATATGTATTTGCAATGTGTTTATCCAATGAAGTTCAGTGTTTTTAACTTGAGAT
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