Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g15160.1
CDS Infomation

gene=Cs1g15160
Sequence

ATGGAACAAATGAAGGAAAGATTTGCGAAACTGCTTTTGGGAGAAGACATGTCTGGTGGA
GGAAAGGGAGTTTCATCTGCTTTGGCACTGTCAAATGCCATTACAAATCTTGCAGCTTCT
GTATTCAGTGAGCAAGCACGTTTAGAGCCAATGTCAGCTGAGACAAAGGCGAGATGGAGA
AAAGAAATTGATTGGCTTTTATCTGTGACTGACCACATTGTTGAATTTGTTCCTTCTCAG
CAGAAATCCAAGGATGGAACAAATATGGAGATAATGGTGACGCGACAAAGAACTGATCTT
CACATGAATATCCCTGCATTGCGGAAGCTTGATGCAATGCTTGTTGAGTGTCTAGAAAAT
TTTAAGGACCAATCTGAGTTCTATTATGTTTCAAAAGATGCACCTGACTCAGAAAAAGGA
AACACCAAGAGAAGTGATGAGAAATGGTGGCTGCCTACGCCTAAAGTTCCCCCAAATGGT
CTATCTGACATGGCAAGAAAATTCCTGCAGTACCAGAAGGATTGTGTAAACCAAGTGCTT
AAAGCAGCCATGGCTATAAATGCTCAAGTTCTTTCCGAAATGGAGATCCCAGAGAATTAC
ATAGAAACTTTGCCCAAGAATGGGAGGGCAAGCCTTGGGGACGCAATCTACAGGAGTATA
ACTGTTGAATACTTTAATCCTGACCAGTTCCTATCGACAATGGACTTGTCATCAGAGCAC
AAAATCTTGGACCTAAAGAACAGAATTGAGGCTTCCATAGTGATCTGGAGGAGAAAGATG
AACCAAAAAGACGGAAAATCAGCTTGGGGTTCAGCCGTAAGCTTGGAGAAGAGAGAACAG
TTTGAAGAGAGAGCAGAGACCATCTTACTCATTCTCAAACAATGGTACCCTGGAATCCCT
CAATCTTCTCTAGACATCAGCAAAATCCAATTCAACAAGGATATTGGGCAGGCTGTTCTG
GAAAGTTATTCAAGAATACTTGAAAGTTTGGCCTTCACAGTCCTGTCACGAATTGAAGAT
GTACTCTATGCTGATTTTGCCACTCAAAATCCATCACAAGCAGCACTGATGAGAAATTCT
TTGAGGTGTACCTCTTTTTCAGCGACAGACAGGTTAATTACTCCCTTGGATGAGACAGAA
AGGCCGAGCTCAGTGGAGGGAATGACACTACTGGATTTTATGGGTTGGGGTTTAGGTTCA
GATCAAGCTGAGAATGAAGGGAAGAAGGAACCAGAAGAGGTTGCTGATGAACCAGTGAAA
GATGACGAAAAGTTTACAACACCAAAAGGTCCAAAACTTACTCACATTGTGACCAGCAAG
AGGGTTTCTTACCTAGAAAGCTTAGGCGGTCTACGAAGCCCCACTGCCCGGCATTAA

Peptide Sequence

PEP ID

Cs1g15160.1
PEP Infomation
Sequence

MEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFSEQARLEPMSAETKARWR
KEIDWLLSVTDHIVEFVPSQQKSKDGTNMEIMVTRQRTDLHMNIPALRKLDAMLVECLEN
FKDQSEFYYVSKDAPDSEKGNTKRSDEKWWLPTPKVPPNGLSDMARKFLQYQKDCVNQVL
KAAMAINAQVLSEMEIPENYIETLPKNGRASLGDAIYRSITVEYFNPDQFLSTMDLSSEH
KILDLKNRIEASIVIWRRKMNQKDGKSAWGSAVSLEKREQFEERAETILLILKQWYPGIP
QSSLDISKIQFNKDIGQAVLESYSRILESLAFTVLSRIEDVLYADFATQNPSQAALMRNS
LRCTSFSATDRLITPLDETERPSSVEGMTLLDFMGWGLGSDQAENEGKKEPEEVADEPVK
DDEKFTTPKGPKLTHIVTSKRVSYLESLGGLRSPTARH*

Transcript Sequence

Transcript ID

Cs1g15160.1
Transcript Infomation

gene=Cs1g15160 CDS=419-1795
Sequence

CAACAAAAGAAGAAAACATCGAAAATGGTTCGTGCATTGGAGCAAGAACAAGAGAATTAT
AGGTCAAGGTTGTTTCATTTCAAAGGGCTGCATGATACAGGAAGGCATGCAAAGAGTTTG
AGCGTCGAGAGTGCGAGTAAATTAGGTGATGCAGCATCTTTTGATGAGGCACCACCCACA
TATAGAAGTCAGGGGCCTAGAAGTGATCACCCCATGGAGAAGCAGCAAATTGGAAGTGCG
TTTGGTCGAAACATGATTCCTAGGTCTCCGCTGACCAAGGATGATGCCACGGCACAAACC
CATGAAAGGCTACAACAGGGTAATTAAAATAATTAGATCATGATCACTGTGTTATGTAAA
TGTGACATGAAAAAATCTTTGTAACGTGTTACATGTGTGAGTGTGACTTTGAACAGATAT
GGAACAAATGAAGGAAAGATTTGCGAAACTGCTTTTGGGAGAAGACATGTCTGGTGGAGG
AAAGGGAGTTTCATCTGCTTTGGCACTGTCAAATGCCATTACAAATCTTGCAGCTTCTGT
ATTCAGTGAGCAAGCACGTTTAGAGCCAATGTCAGCTGAGACAAAGGCGAGATGGAGAAA
AGAAATTGATTGGCTTTTATCTGTGACTGACCACATTGTTGAATTTGTTCCTTCTCAGCA
GAAATCCAAGGATGGAACAAATATGGAGATAATGGTGACGCGACAAAGAACTGATCTTCA
CATGAATATCCCTGCATTGCGGAAGCTTGATGCAATGCTTGTTGAGTGTCTAGAAAATTT
TAAGGACCAATCTGAGTTCTATTATGTTTCAAAAGATGCACCTGACTCAGAAAAAGGAAA
CACCAAGAGAAGTGATGAGAAATGGTGGCTGCCTACGCCTAAAGTTCCCCCAAATGGTCT
ATCTGACATGGCAAGAAAATTCCTGCAGTACCAGAAGGATTGTGTAAACCAAGTGCTTAA
AGCAGCCATGGCTATAAATGCTCAAGTTCTTTCCGAAATGGAGATCCCAGAGAATTACAT
AGAAACTTTGCCCAAGAATGGGAGGGCAAGCCTTGGGGACGCAATCTACAGGAGTATAAC
TGTTGAATACTTTAATCCTGACCAGTTCCTATCGACAATGGACTTGTCATCAGAGCACAA
AATCTTGGACCTAAAGAACAGAATTGAGGCTTCCATAGTGATCTGGAGGAGAAAGATGAA
CCAAAAAGACGGAAAATCAGCTTGGGGTTCAGCCGTAAGCTTGGAGAAGAGAGAACAGTT
TGAAGAGAGAGCAGAGACCATCTTACTCATTCTCAAACAATGGTACCCTGGAATCCCTCA
ATCTTCTCTAGACATCAGCAAAATCCAATTCAACAAGGATATTGGGCAGGCTGTTCTGGA
AAGTTATTCAAGAATACTTGAAAGTTTGGCCTTCACAGTCCTGTCACGAATTGAAGATGT
ACTCTATGCTGATTTTGCCACTCAAAATCCATCACAAGCAGCACTGATGAGAAATTCTTT
GAGGTGTACCTCTTTTTCAGCGACAGACAGGTTAATTACTCCCTTGGATGAGACAGAAAG
GCCGAGCTCAGTGGAGGGAATGACACTACTGGATTTTATGGGTTGGGGTTTAGGTTCAGA
TCAAGCTGAGAATGAAGGGAAGAAGGAACCAGAAGAGGTTGCTGATGAACCAGTGAAAGA
TGACGAAAAGTTTACAACACCAAAAGGTCCAAAACTTACTCACATTGTGACCAGCAAGAG
GGTTTCTTACCTAGAAAGCTTAGGCGGTCTACGAAGCCCCACTGCCCGGCATTAAGTAAC
AACTGTAGGGAAGAAGACAAAATATCAAAAAACAGACAAACGGAAACCAGAAAGAGAGGG
GCTAATATAAAAGGAAACACAAAACAAAGAGAGAAAGC