Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g13860.3
CDS Infomation

gene=Cs1g13860
Sequence

ATGGTAGGGACAAATTCGCTAGTGGGATTGCAAGATCACTTGAAGCTTGCCAGAGAGTAC
GCGCTAGAAGGACTTTACGACACCTCGATCATCTTCTTCGACGGTGCCATTGCTCAGATC
AACAAGCACCTAAATACGCTTGATGATCCATTAATACGTGCAAAATGGATGAATGTCAAG
AAAGCTCTGTTGGAGGAAACAGATGTTGTGAAGCAATTGGATGCTGAGAGAAGAGCATTT
AAGGAAGTTCCAGGAAGCAGGCGTACTTCTTCACCGCCAATTAATGCTAAATCTTCGTTT
GTTTTTCAGCCGTTGGATGAGTATCCAACTTCCTCAGGTGCTCCAATGGATGATCCTGAT
GTGTGGAGGCCACCAAGTCGGGACACTCCGAGCAGGAGACCCGCGAGGGCTGGTCAAGTT
GGTATGAGAAAATCACCTCAAGATGGGGCTTGGGCTCGTGGTGCTACTAACAGAACTGGT
ACATCTAGCCGTGGTGGAAAGGCTGCTGGTCCCAGCAGGGGTAACACAGGTGTTCGAGCA
TCAACTACTGGCAAAAAAGGCACTGGTTCTGGAAAATCTGGCAAGGCAGATTCTGCTAAT
GGTGACAGTGAAGATGGAAAGTCAAAGAAAAAAGAGTATGAGGGACCTGATCCTGACTTG
GCCGCAATGCTTGAAAGGGATGTCTTGGAAACTAGTCCCGGAGTCCGGTGGGATGATGTT
GCTGGTCTGACTGAAGCAAAGAGACTGTTAGAGGAAGCAGTTGTCCTTCCTCTGTGGATG
CCTGAATATTTTCAGGGAATTAGGAGACCGTGGAAAGGTGTTCTTATGTTTGGTCCACCT
GGAACTGGAAAGACGCTTCTGGCTAAAGCAGTTGCTACCGAGTGTGGCACCACGTTTTTT
AATGTATCTTCTGCTACCTTAGCATCAAAATGGCGTGGTGAGAGTGAACGCATGGTGCGG
TGCTTGTTTGATCTGGCAAGAGCTTATGCACCAAGCACAATTTTTATTGATGAGATTGAT
TCACTTTGCAATGCTCGAGGTGCTTCAGGGGAGCATGAATCATCGAGAAGGGTGAAGTCC
GAACTTCTAGTTCAGGTAGATGGTGTAAATAATACAGGAACAAATGAAGATGGTAGCCGT
AAAATAGTGATGGTTTTGGCAGCTACTAACTTCCCATGGGACATTGACGAGGCTCTCAGG
TTGATCCGCTTAATAGTTTACCTTATTTTGGATTTTCTCTACCCTTTGAATTTATTATGT
ATCTCATTTGCTTGTAAATGCAATGCAGGAGGAGGCTGGAAAAACGTATATATATTCCAC
TTCCCAATTTTGAGAGTCGTAAGGAGCTTATTAAGATTAATCTGA

Peptide Sequence

PEP ID

Cs1g13860.3
PEP Infomation
Sequence

MVGTNSLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVK
KALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTSSGAPMDDPD
VWRPPSRDTPSRRPARAGQVGMRKSPQDGAWARGATNRTGTSSRGGKAAGPSRGNTGVRA
STTGKKGTGSGKSGKADSANGDSEDGKSKKKEYEGPDPDLAAMLERDVLETSPGVRWDDV
AGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF
NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKS
ELLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRLIRLIVYLILDFLYPLNLLC
ISFACKCNAGGGWKNVYIFHFPILRVVRSLLRLI*

Transcript Sequence

Transcript ID

Cs1g13860.3
Transcript Infomation

gene=Cs1g13860 CDS=163-1527
Sequence

TATTTTTTGAAAATAGTCCAAAACAGTATTTACTCGTTCTTCTTCTTCCCTCTCTCAACC
ACTTAAAACGTCGCCGTCACAAGTCATCACTTCACAGCTTCACCAAATCAGGTGAATTTA
AATCAGATGAAACCCTAGAATTTTGGGCGTAATTTTAACAAGATGGTAGGGACAAATTCG
CTAGTGGGATTGCAAGATCACTTGAAGCTTGCCAGAGAGTACGCGCTAGAAGGACTTTAC
GACACCTCGATCATCTTCTTCGACGGTGCCATTGCTCAGATCAACAAGCACCTAAATACG
CTTGATGATCCATTAATACGTGCAAAATGGATGAATGTCAAGAAAGCTCTGTTGGAGGAA
ACAGATGTTGTGAAGCAATTGGATGCTGAGAGAAGAGCATTTAAGGAAGTTCCAGGAAGC
AGGCGTACTTCTTCACCGCCAATTAATGCTAAATCTTCGTTTGTTTTTCAGCCGTTGGAT
GAGTATCCAACTTCCTCAGGTGCTCCAATGGATGATCCTGATGTGTGGAGGCCACCAAGT
CGGGACACTCCGAGCAGGAGACCCGCGAGGGCTGGTCAAGTTGGTATGAGAAAATCACCT
CAAGATGGGGCTTGGGCTCGTGGTGCTACTAACAGAACTGGTACATCTAGCCGTGGTGGA
AAGGCTGCTGGTCCCAGCAGGGGTAACACAGGTGTTCGAGCATCAACTACTGGCAAAAAA
GGCACTGGTTCTGGAAAATCTGGCAAGGCAGATTCTGCTAATGGTGACAGTGAAGATGGA
AAGTCAAAGAAAAAAGAGTATGAGGGACCTGATCCTGACTTGGCCGCAATGCTTGAAAGG
GATGTCTTGGAAACTAGTCCCGGAGTCCGGTGGGATGATGTTGCTGGTCTGACTGAAGCA
AAGAGACTGTTAGAGGAAGCAGTTGTCCTTCCTCTGTGGATGCCTGAATATTTTCAGGGA
ATTAGGAGACCGTGGAAAGGTGTTCTTATGTTTGGTCCACCTGGAACTGGAAAGACGCTT
CTGGCTAAAGCAGTTGCTACCGAGTGTGGCACCACGTTTTTTAATGTATCTTCTGCTACC
TTAGCATCAAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTGCTTGTTTGATCTGGCA
AGAGCTTATGCACCAAGCACAATTTTTATTGATGAGATTGATTCACTTTGCAATGCTCGA
GGTGCTTCAGGGGAGCATGAATCATCGAGAAGGGTGAAGTCCGAACTTCTAGTTCAGGTA
GATGGTGTAAATAATACAGGAACAAATGAAGATGGTAGCCGTAAAATAGTGATGGTTTTG
GCAGCTACTAACTTCCCATGGGACATTGACGAGGCTCTCAGGTTGATCCGCTTAATAGTT
TACCTTATTTTGGATTTTCTCTACCCTTTGAATTTATTATGTATCTCATTTGCTTGTAAA
TGCAATGCAGGAGGAGGCTGGAAAAACGTATATATATTCCACTTCCCAATTTTGAGAGTC
GTAAGGAGCTTATTAAGATTAATCTGAAAACAGTTGAGGTGTCCAAGGATGTAGATATCG
ATGAAGTGGCTCGCCGAACGGACGGATACAGTGGAGACGATCTGACAAACGTTTGCCGTG
ATGCCTCTTTGAATGGCATGAGACGTAAAATAGCTGGAAAAACTCGCGACGAGATTAAGA
ACATGTCCAAGGATGAGATTTCAAAAGACCCTGTTGCCATGTGTGACTTTGAGGAGGCTT
TGACGAAGGTACAGCGAAGTGTATCCCAAGCTGATATCGAAAAGCATGAGAAATGGTTTC
AAGAATTCGGATCAGCATAAGAAGGTGGCAGAAAGCAATATCAAAGATGATGCATTTTTT
GTTGTCTTGATATTCGTCTGCCTGCCGGGTGATTGTTTGTAATGTTTTTCCTTCTGTTTC
ACTTGTGTGATTGATTGATTGAGCAATTTTGAACAAGCCTGTTGCTAATGTCTCTGTCAC
TTTCCATTTTTAACCTCACCTTATGTAATGTAATATGGAGTTTGTAGTCAGTGTCTTTTA
TTCCAAATATTGCTTTGGTTTCTATGCATTTTCAACTACTAGGACCAATCTTG