Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g12380.1
CDS Infomation

gene=Cs1g12380
Sequence

ATGGCGTTTGGCTCTATCTTTTGTTGTGGGAAAGTCTCAGATCGGAAAGAGAAAGGAAAG
AAGCAGCCAACATGGAGAATCTTCTCATTGAAGGAATTACACTCTGCCACAAACAATTTC
AATTACGATAACAAGCTTGGAGAAGGAGGATTTGGCAGTGTTTACTGGGGTCAGCTTTGG
GATGGATCACAGATTGCAGTGAAGAGATTAAAAGTTTGGAGCAATAAAGCAGAGATGGAA
TTTGCTGTTGAAGTTGAGATACTGGCACGGGTTAGGCACAAGAATTTGCTTAGTTTACGT
GGCTACTGTGCTGAAGGACAAGAGCGCCTGATTGTATATGACTATATGCCAAATTTGAGC
TTGCTGTCTCATCTACACGGACAGCACTCATCAGAATGCCTTCTCAATTGGAACAGAAGG
ATGGATATTGCCATAGGTTCTGCAGAGGGGATTGTATATCTTCACCATCACGCTACACCA
CATATAATCCACAGAGACATCAAAGCTAGCAATGTGTTGCTGGATGCTGATTTTAAGGCT
CAGGTTGCCGATTTTGGATTTGCTAAGCTAATCCCTGATGGTGCTACACATGTGACTACT
AGAGTTAAGGGTACCCTAGGCTACCTTGCCCCTGAATATGCAATGTTAGGGAAAGCATCA
GAGAGTTGTGATGTATACAGCTTTGGCATTCTCTTGTTAGAGCTGGCCAGTGGCAAGAAA
CCTATTGAAAAAGTGAATTCTGCAATTAAACGAACAATTACAGACTGGGCTTTGCCACTG
GCTTGTGAAAGGAAGTTCAGCGAATTGGCAGATCCAAGGCTAAATGGAAACTTTGTGGAA
GAAGAATTGAAAAGAGTCGTCCTTGTTGCGCTCACATGTGCTCACAGTAAGCCTGAGAAA
AGACCCACGATGCTTGAGGTGTTGGACCTACTGAAGGGAGAATCAAAGGAGAAGCTGACT
GAACTCGAAAATGATGAACTGTTCAAGAGCCATCAGGTTGCAGACTATAACGACGGAAAA
GCAGTTGCAGAGGACAGCGCGGAGAAGTTGGCTGAACTCGAAAATGATGAACTGTTCAAG
AGCCATCAGGTTGCAGATTATAATGACGGAAAAGCAGTCGCAGAGGACAGCACAGACTCC
ATTTCAGAAGAGAAGGATCTTAAACAGGTGAAGGAGGAGATCGAACCTGAGAAAGCTCAA
TAG

Peptide Sequence

PEP ID

Cs1g12380.1
PEP Infomation
Sequence

MAFGSIFCCGKVSDRKEKGKKQPTWRIFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLW
DGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLS
LLSHLHGQHSSECLLNWNRRMDIAIGSAEGIVYLHHHATPHIIHRDIKASNVLLDADFKA
QVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKK
PIEKVNSAIKRTITDWALPLACERKFSELADPRLNGNFVEEELKRVVLVALTCAHSKPEK
RPTMLEVLDLLKGESKEKLTELENDELFKSHQVADYNDGKAVAEDSAEKLAELENDELFK
SHQVADYNDGKAVAEDSTDSISEEKDLKQVKEEIEPEKAQ*

Transcript Sequence

Transcript ID

Cs1g12380.1
Transcript Infomation

gene=Cs1g12380 CDS=449-1651
Sequence

GTTGTGTTATTTTGTTTTGGAGTTTTGAGAGAGTAGACATTAAGACAATACAAACTACAA
AGACTTGTCTTCGGTTACACACTTTCTTTCAATTTCTTTTCTCTCTTTTTTTTTTTTGTG
GGTTTTTAATTTTTAATCTTTTCATTGTTTCTTCAGAGCTAAGCACCGCAGCAGTTGGCT
GAAGAAAGAGCATAGATATAGGGGAGGAAAAAAAAAAAAGGAAAGAGAATAAAAGAACTG
TGTGCTGGTCAAGCCAGAGCGTTATGCTTTAGAATCTTAGCAGCAGCCATTCAGCAGCAA
AAACGAACTCTGACACTGAAAGTAAAAACAACCCAGAAAAGATTAGCTAACGAGTATTTA
CAGAAGCAGAGAAAAAGATATTTTTTATTTTTATTTTTAATTTTCCCCTTTTCTGTGGGT
TTTCAATTACTGGAGGTTGAAAGTTGAAATGGCGTTTGGCTCTATCTTTTGTTGTGGGAA
AGTCTCAGATCGGAAAGAGAAAGGAAAGAAGCAGCCAACATGGAGAATCTTCTCATTGAA
GGAATTACACTCTGCCACAAACAATTTCAATTACGATAACAAGCTTGGAGAAGGAGGATT
TGGCAGTGTTTACTGGGGTCAGCTTTGGGATGGATCACAGATTGCAGTGAAGAGATTAAA
AGTTTGGAGCAATAAAGCAGAGATGGAATTTGCTGTTGAAGTTGAGATACTGGCACGGGT
TAGGCACAAGAATTTGCTTAGTTTACGTGGCTACTGTGCTGAAGGACAAGAGCGCCTGAT
TGTATATGACTATATGCCAAATTTGAGCTTGCTGTCTCATCTACACGGACAGCACTCATC
AGAATGCCTTCTCAATTGGAACAGAAGGATGGATATTGCCATAGGTTCTGCAGAGGGGAT
TGTATATCTTCACCATCACGCTACACCACATATAATCCACAGAGACATCAAAGCTAGCAA
TGTGTTGCTGGATGCTGATTTTAAGGCTCAGGTTGCCGATTTTGGATTTGCTAAGCTAAT
CCCTGATGGTGCTACACATGTGACTACTAGAGTTAAGGGTACCCTAGGCTACCTTGCCCC
TGAATATGCAATGTTAGGGAAAGCATCAGAGAGTTGTGATGTATACAGCTTTGGCATTCT
CTTGTTAGAGCTGGCCAGTGGCAAGAAACCTATTGAAAAAGTGAATTCTGCAATTAAACG
AACAATTACAGACTGGGCTTTGCCACTGGCTTGTGAAAGGAAGTTCAGCGAATTGGCAGA
TCCAAGGCTAAATGGAAACTTTGTGGAAGAAGAATTGAAAAGAGTCGTCCTTGTTGCGCT
CACATGTGCTCACAGTAAGCCTGAGAAAAGACCCACGATGCTTGAGGTGTTGGACCTACT
GAAGGGAGAATCAAAGGAGAAGCTGACTGAACTCGAAAATGATGAACTGTTCAAGAGCCA
TCAGGTTGCAGACTATAACGACGGAAAAGCAGTTGCAGAGGACAGCGCGGAGAAGTTGGC
TGAACTCGAAAATGATGAACTGTTCAAGAGCCATCAGGTTGCAGATTATAATGACGGAAA
AGCAGTCGCAGAGGACAGCACAGACTCCATTTCAGAAGAGAAGGATCTTAAACAGGTGAA
GGAGGAGATCGAACCTGAGAAAGCTCAATAGTTGAGCTACTCTGCAACTACCAGACTGTT
AGATATAGAGTTTGAATGTTCTGCATATTTTGGTTTTTTGCTACTAAGCACAGGGTGGCG
CCAGATGTGCATCTTATTAGAAAATGCAGAAAGCATGTTTTTTAAGAGTGCTGTGAGTTT
GGTTTGTGGGTATCCCTTTCTTTAATGAATTTAATGTAAATGCATCTTCAGAACTCTGTT
GTTTTTGCTGAACCTTTTGGCTGCTAGACCTTAAGAAGTGAAGCTGGAACCGTCGGGTGA
AACTTATTGGGTGTTGCCGATGGGCCGTGGAAAATGTAGCCGAAAGCCAAGTGTGTTACA
TCCATATATTCCACAGAATACATTTCACTAAATGTTTCTACTTATTTCAATTTTCAAGTC
ACATGATTTTAGAATGGCGTGAAGGCGCTCTCTTTTAATCTGTTGAGCAACTTTCAATAG
AATTAGAAGCTGCGACAGAGTCGCATATAAAATAGTACAAATTAATCTGCAAGGCCACTC
CTTAATACCACATAGAGGACTTTTAGATCCAGCATCAACAGAAAATTTATGAAACCTCGT
TACCGTATCTATTTACACCTCAAACTATAATTCTACAGAGAATTACAACTGTCCCAGAAG
TAAACACGTTTTTATAACGACCAAAAATGGGGCACTGCTTCATCCCCATGTTGGTAAAGT
AAATCTACTCCAGTCTAGCAGCTTCCAAGCAAATGCTACAATTTAATTCACAAGAAAGAT
TACGACCTCAAAATAGCATCAATAGGCTTATGAGAATGTATCCTCACGATCTCCCTCTGC
CATTTCGCCCTCCTCCAAGTTGCTGAACTCCAAGAAATGAGTTGGCCTATGGTCCTCATG
GTAGTATTCTCGAGGAGTCCCAAGCTTGACACCATATTTCATGCTCACTGTATGCTT