Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g11110.3
CDS Infomation

gene=Cs1g11110
Sequence

ATGGATTACAGTTCTCAGGAAGAGTCAGATATTAGTGATTCCGAGATTAATGAATACTTA
GAGAAACCATATGAAGAACTGAGGGCTGGGAAGTATAAGGTGCGAGTTAATGGCACATTA
AGATGCCCCTTTTGTTCTGGGAAGAAGAAACAAGATTACAAGCACAAGGACTTGCTTCAA
CATGCTTCAGGTGTGGGTAAAGGATCTGCTAACAGAAGCGCAAAACAAAAGGCAAATCAC
TTGGCTCTTGCAAAGTATCTAGAGGTTGATCTGGCTGGTGGTGTGGATAAACCTCAACGT
CCTGTTTTACCACAGCCAGTCAATCAAAACCCAGAGCAAGAGGATCTCTATGTCTGGCCT
TGGATGGGAATAATTGTCAACATTGTCATGGAGACCAAGGATAGAGGCTCTTTTCTGGAT
AGCGGATACTGGTTAAAGAGGTTTGCTGTATTTAAACCTGTAGAGGTTCGTATTTTCTGG
AATGAGGAAAATCCTACTGCACAGGCCGTAGTGAAATTCAATAATGATTGGAACGGTTTC
ATGCAAGCTTCGGATTTTGAAAAAGCATTTGACGCTGATCATCAAGGTAAAAGACATTGG
ATTGCAAGAAAAGAAAGTCCTGGTTTGAGAATTTACGGATGGTTTGCACGAGCTGATGAT
AACACTTCTGAAGGACCAATAGGGGAGTATCTTCGCCAGGAAGGGAAGTTAAGAACAGTT
TCGGACATTGTTCAGGAAGATGCTCAGAGTAAAATTCATGTGGTTGCACACCTTGCAAGT
AAGATTGACATGAAGAATGAAGATCTCAGTGAACTACAGTGTAAGTTCAACGAGACTACT
ATGTCTCTGAGCCGGATGCTTGAGGAGAAAGACAGACTGCACTATGCTTTTGTTGAAGAA
ACTAGGAAGATGCAGCGGCTTGCTCGTGATAATGTTCGAAGGATCTTAGAAGAACAAGAA
AAGCTCAGTTGTGAATTGGAGACCAAGAAGAAGAAACTTGATTCCTGGAGCAAACAATTG
AACAAGCGTGAAGCACTAACTGAGCGTGAGAGACAAAAACTTGACGCAGACAGACAACAG
AATGACCTGAGGAACAATTCACTTCAGTTGGCTTCCATGGAGCAGAAAAAGGCGGATGAG
AACGTCTTAAGACTAGTTGAAGAGCAAAAAAGGGAAAAAGAGGAGGCCCTAAGTAAGATA
CTTCAATTAGAAAAACAGCTGGATGCTAAACAGAAGCTGGAAATGGAAATTGAGGACTTG
AAAGGGAAACTAGAGGTAATGAAGCACCTCGGAGATGAAGATGATGCAGCAGTTCAAAAG
AAGATGAAAGAGATGAATGATGAGCTGGAGTCGAAAATTGATGATTTGGATGAGATGGAA
TCTTTAAATAAAACACTCATCGCGAAAGAGCGTCAGAGCAATGATGAGCTACAAGAAGCT
CGCAGAGAATTAATCCAGGGCTTGTCGGATCTGATTGGTGCTCGCACTAATATCGGAGTG
AAGAGATTGGGTGAGATTGATCCAAAGCCGTTTCAGGATGCATGCAAGAATAAATTTCCA
CTTGAGGAAGCACAGGTGGAGGCCTCTACTCTATGCTCCTTGTGGCAGGAGAATCTAAAG
GCAACTGAATGGCACCCATTTAAGATAATACATGTTGAAGGTACTCCCAAGGAAATTATA
GATGAAGAGGATGAGAAGATAAAAAGTCTCAAGGAGTTGGGGGATGAGATATACATGGCA
GTTACAACAGCTCTGAAGGAATTAAATGAGTATAATCCAAGTGGGAGATATGTCATTCCT
GACCTTTGGAACTTTAAAGAAGGAAGGAAAGCCACATTAAAAGAAGTCATTTCCTATATT
GTGGGCAATATCAGAAGACTTAAACGCAAGAGAACATAA

Peptide Sequence

PEP ID

Cs1g11110.3
PEP Infomation
Sequence

MDYSSQEESDISDSEINEYLEKPYEELRAGKYKVRVNGTLRCPFCSGKKKQDYKHKDLLQ
HASGVGKGSANRSAKQKANHLALAKYLEVDLAGGVDKPQRPVLPQPVNQNPEQEDLYVWP
WMGIIVNIVMETKDRGSFLDSGYWLKRFAVFKPVEVRIFWNEENPTAQAVVKFNNDWNGF
MQASDFEKAFDADHQGKRHWIARKESPGLRIYGWFARADDNTSEGPIGEYLRQEGKLRTV
SDIVQEDAQSKIHVVAHLASKIDMKNEDLSELQCKFNETTMSLSRMLEEKDRLHYAFVEE
TRKMQRLARDNVRRILEEQEKLSCELETKKKKLDSWSKQLNKREALTERERQKLDADRQQ
NDLRNNSLQLASMEQKKADENVLRLVEEQKREKEEALSKILQLEKQLDAKQKLEMEIEDL
KGKLEVMKHLGDEDDAAVQKKMKEMNDELESKIDDLDEMESLNKTLIAKERQSNDELQEA
RRELIQGLSDLIGARTNIGVKRLGEIDPKPFQDACKNKFPLEEAQVEASTLCSLWQENLK
ATEWHPFKIIHVEGTPKEIIDEEDEKIKSLKELGDEIYMAVTTALKELNEYNPSGRYVIP
DLWNFKEGRKATLKEVISYIVGNIRRLKRKRT*

Transcript Sequence

Transcript ID

Cs1g11110.3
Transcript Infomation

gene=Cs1g11110 CDS=154-2052
Sequence

GCAGTACAACAGCGCGAGCCTGTGACTCGTGACTCGTTCATTTTTAAATTTCCCATAAAA
ATGCGAAAAAGCGAAAAACCAAAACAAACAGCAGCGGCCAGCAGCAGTGGAGAACACACA
CTCTCTCTCTAAATTTCCATTGATATAAGGCAGATGGATTACAGTTCTCAGGAAGAGTCA
GATATTAGTGATTCCGAGATTAATGAATACTTAGAGAAACCATATGAAGAACTGAGGGCT
GGGAAGTATAAGGTGCGAGTTAATGGCACATTAAGATGCCCCTTTTGTTCTGGGAAGAAG
AAACAAGATTACAAGCACAAGGACTTGCTTCAACATGCTTCAGGTGTGGGTAAAGGATCT
GCTAACAGAAGCGCAAAACAAAAGGCAAATCACTTGGCTCTTGCAAAGTATCTAGAGGTT
GATCTGGCTGGTGGTGTGGATAAACCTCAACGTCCTGTTTTACCACAGCCAGTCAATCAA
AACCCAGAGCAAGAGGATCTCTATGTCTGGCCTTGGATGGGAATAATTGTCAACATTGTC
ATGGAGACCAAGGATAGAGGCTCTTTTCTGGATAGCGGATACTGGTTAAAGAGGTTTGCT
GTATTTAAACCTGTAGAGGTTCGTATTTTCTGGAATGAGGAAAATCCTACTGCACAGGCC
GTAGTGAAATTCAATAATGATTGGAACGGTTTCATGCAAGCTTCGGATTTTGAAAAAGCA
TTTGACGCTGATCATCAAGGTAAAAGACATTGGATTGCAAGAAAAGAAAGTCCTGGTTTG
AGAATTTACGGATGGTTTGCACGAGCTGATGATAACACTTCTGAAGGACCAATAGGGGAG
TATCTTCGCCAGGAAGGGAAGTTAAGAACAGTTTCGGACATTGTTCAGGAAGATGCTCAG
AGTAAAATTCATGTGGTTGCACACCTTGCAAGTAAGATTGACATGAAGAATGAAGATCTC
AGTGAACTACAGTGTAAGTTCAACGAGACTACTATGTCTCTGAGCCGGATGCTTGAGGAG
AAAGACAGACTGCACTATGCTTTTGTTGAAGAAACTAGGAAGATGCAGCGGCTTGCTCGT
GATAATGTTCGAAGGATCTTAGAAGAACAAGAAAAGCTCAGTTGTGAATTGGAGACCAAG
AAGAAGAAACTTGATTCCTGGAGCAAACAATTGAACAAGCGTGAAGCACTAACTGAGCGT
GAGAGACAAAAACTTGACGCAGACAGACAACAGAATGACCTGAGGAACAATTCACTTCAG
TTGGCTTCCATGGAGCAGAAAAAGGCGGATGAGAACGTCTTAAGACTAGTTGAAGAGCAA
AAAAGGGAAAAAGAGGAGGCCCTAAGTAAGATACTTCAATTAGAAAAACAGCTGGATGCT
AAACAGAAGCTGGAAATGGAAATTGAGGACTTGAAAGGGAAACTAGAGGTAATGAAGCAC
CTCGGAGATGAAGATGATGCAGCAGTTCAAAAGAAGATGAAAGAGATGAATGATGAGCTG
GAGTCGAAAATTGATGATTTGGATGAGATGGAATCTTTAAATAAAACACTCATCGCGAAA
GAGCGTCAGAGCAATGATGAGCTACAAGAAGCTCGCAGAGAATTAATCCAGGGCTTGTCG
GATCTGATTGGTGCTCGCACTAATATCGGAGTGAAGAGATTGGGTGAGATTGATCCAAAG
CCGTTTCAGGATGCATGCAAGAATAAATTTCCACTTGAGGAAGCACAGGTGGAGGCCTCT
ACTCTATGCTCCTTGTGGCAGGAGAATCTAAAGGCAACTGAATGGCACCCATTTAAGATA
ATACATGTTGAAGGTACTCCCAAGGAAATTATAGATGAAGAGGATGAGAAGATAAAAAGT
CTCAAGGAGTTGGGGGATGAGATATACATGGCAGTTACAACAGCTCTGAAGGAATTAAAT
GAGTATAATCCAAGTGGGAGATATGTCATTCCTGACCTTTGGAACTTTAAAGAAGGAAGG
AAAGCCACATTAAAAGAAGTCATTTCCTATATTGTGGGCAATATCAGAAGACTTAAACGC
AAGAGAACATAAGGCTAAGGTATTTTGTTTTCTATTTGAAAATTTTATTTTCTGCAGTAA
CCTTCTGGTGATATATTATTTGGGTTGATTTTAGAGCTCAGATATGTATATTATTATCAT
TCGGTTTACCTTTTCAAACATATTCTGAAGCTAAAGCACCGTTAATATTGAAATTTTCTT
TTGACTAAATGGAGACTCATAATTTTTAATGACCGACAACTAAGAAATCTGAATCTTGAA
AATACATCCTGTTTTCTAAGCAACAGCAACATTTGGACACGATGTGGAGAACAAGTTGCA
AGAACTTGAAACTATTGTTAACGCAAAGGGCAGGAAAGAATGAATTATGGTAATTGAAAT
TTTTCTTTCCCTAGCCCAGGATGATCTTT