Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g10660.1
CDS Infomation

gene=Cs1g10660
Sequence

ATGGGTTCCAGGTTCCCATCTCATCAGCTCAGCAATGGCCTTTACGTATCAGGCCGGCCA
GAGCAACCCAAAGAAAGGACACCAACAATGAGCTCAGTAGCCATGCCTTATACTGGAGGC
GATATAAAAAAATCCGGAGAGCTAGGGAAAATGTTTGATATTCCTGTTGACGGTTCCAAG
TCTAGGAAGTCTGGACCTATAAATAATGCTCCTTCAAGGACTGGATCTTTTGGTGGTGCT
GCTTCACATTCAGGACCTATCATGCCTAATGCTGCCTCTAGGGCTAGCTACTCAACGTCA
GGTCCTGTCTCTTCTGGAGTCACGTCTGGTTCAGCTTCATTAAAGAAGTCAAATTCTGGA
CCACTTAATAAACATGGGGAACCATTAAAGAAGTCTTCCGGTCCTCAATCTGGAGGAGTG
ACACCAAGTGGCCGCCAAAACTCTGGCCCCCTTGCTCCTGCTCTTCCTACTACTGGTCTC
ATTACTTCTGGACCCATCTCTTCAGCCCCACTTAATTCATCTGGGGCACCAAGGAAGGTA
TCTGGTCCTTTGGACTCTATGGGATCAATGAAAATACCAAGCTCTGTTCCTCATAATCAG
GCCATCACTGTCCTTAGCCAAGATGAGGACTTTGACTTCAAGAGGAATTTCCCAAAGCCA
ATATTCTGGTCATTGATTCTCCTTTTTGTGATGGGATTTATCGCTGGTGGTTTTATTCTT
GGAGCAGTTCACAATGCCATTCTGCTCATTGTTGTTGTGGTCCTTTTCAGCTGTGTTGCT
GCTTTGTTTGGTTGGAATACTTTTTGGGGAAGAAAAGCTATTATAAGTTATATTGCTCGT
TATCCAGATGCTGAGCTTAGAAACGCCAAGAATGGTCAATTTGTGAAGATCTCTGGGGTT
GTCACCTGCGGTAATGTTCCTCTTGAATCATCCTTCCAAAAAGTTCCTAGATGTATATAC
ACATCCACAAGTTTGTATGAGTACCGAGGATGGGGTTCAAAAGCTGCCAACCCCACACAT
CGTCGTTTTACTTGGGGGCTCCGATCATTAGAAAGGCGTGCGGTTGACTTCTATATCTCT
GATTTCCAGTCTGGGTTAAGAGCATTGGTTAAAACTGGGTATGGAGCAAGGGTGACTCCT
TATGTTGACGATTCCCTTGCCATTGACGTCAATCCTGGCAAGGAAGAATTATCTCCGGAG
TTCATCAGGTGGTTGGCGGAGAGGAATCTTTCAAGTGATGATCGCATAATGCGACTGAAA
GAGGGGTATATCAAAGAAGGAAGTACTGTTAGTGTAATGGGAGTTGTTCAGAGGAATGAC
AACGTGCTCATGATTGTCCCTCCGCCTGAACCTATCACAACAGGATGCCAATGGGCCAAA
TGTATTGTTCCAGCTAGCCTTGACGGAATTGTATTAAGATGCGAAGATGCCTCCAAGAAC
GACGTCATACCAGTTTAG

Peptide Sequence

PEP ID

Cs1g10660.1
PEP Infomation
Sequence

MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPVDGSK
SRKSGPINNAPSRTGSFGGAASHSGPIMPNAASRASYSTSGPVSSGVTSGSASLKKSNSG
PLNKHGEPLKKSSGPQSGGVTPSGRQNSGPLAPALPTTGLITSGPISSAPLNSSGAPRKV
SGPLDSMGSMKIPSSVPHNQAITVLSQDEDFDFKRNFPKPIFWSLILLFVMGFIAGGFIL
GAVHNAILLIVVVVLFSCVAALFGWNTFWGRKAIISYIARYPDAELRNAKNGQFVKISGV
VTCGNVPLESSFQKVPRCIYTSTSLYEYRGWGSKAANPTHRRFTWGLRSLERRAVDFYIS
DFQSGLRALVKTGYGARVTPYVDDSLAIDVNPGKEELSPEFIRWLAERNLSSDDRIMRLK
EGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPITTGCQWAKCIVPASLDGIVLRCEDASKN
DVIPV*

Transcript Sequence

Transcript ID

Cs1g10660.1
Transcript Infomation

gene=Cs1g10660 CDS=449-1906
Sequence

AAAAAACAATAATTACTAACTAGCGTCTTAATAATCATTTTACCTTGAGGGGGAAAAAAG
GGCAACAAAAAAAAAAAAAGGGTTTTTGCCGGACGAGACAACCCACCAGTTGTTGCGGCT
CTCGCAAGTGACCCTCACAAGCACAAACACACACACACACAAGACACAACGCATTTATAC
ATACAAGGTTCTGGAGAGAGAAACACTCCCCATTTTCTAGTGAGAGAAACAAGCACCGCA
TACAAAAAAAAAACAGCAAAAGATGTCTCCAAATTTTCAGATTTCTTCTTCTTCTTCTTC
TGCTGCTGCTACTACTGGTACTGCTATAGTCCTGCTACTACTACTTTAACTGTTATTTCT
ACTCTTACGTGAGCTGTGAAAATCGCATCAGCATTCTGTGAGTGGTCTTTGGTTTGTGGT
ACTGTGTGGAGTCTTATAGAGTAGCAAGATGGGTTCCAGGTTCCCATCTCATCAGCTCAG
CAATGGCCTTTACGTATCAGGCCGGCCAGAGCAACCCAAAGAAAGGACACCAACAATGAG
CTCAGTAGCCATGCCTTATACTGGAGGCGATATAAAAAAATCCGGAGAGCTAGGGAAAAT
GTTTGATATTCCTGTTGACGGTTCCAAGTCTAGGAAGTCTGGACCTATAAATAATGCTCC
TTCAAGGACTGGATCTTTTGGTGGTGCTGCTTCACATTCAGGACCTATCATGCCTAATGC
TGCCTCTAGGGCTAGCTACTCAACGTCAGGTCCTGTCTCTTCTGGAGTCACGTCTGGTTC
AGCTTCATTAAAGAAGTCAAATTCTGGACCACTTAATAAACATGGGGAACCATTAAAGAA
GTCTTCCGGTCCTCAATCTGGAGGAGTGACACCAAGTGGCCGCCAAAACTCTGGCCCCCT
TGCTCCTGCTCTTCCTACTACTGGTCTCATTACTTCTGGACCCATCTCTTCAGCCCCACT
TAATTCATCTGGGGCACCAAGGAAGGTATCTGGTCCTTTGGACTCTATGGGATCAATGAA
AATACCAAGCTCTGTTCCTCATAATCAGGCCATCACTGTCCTTAGCCAAGATGAGGACTT
TGACTTCAAGAGGAATTTCCCAAAGCCAATATTCTGGTCATTGATTCTCCTTTTTGTGAT
GGGATTTATCGCTGGTGGTTTTATTCTTGGAGCAGTTCACAATGCCATTCTGCTCATTGT
TGTTGTGGTCCTTTTCAGCTGTGTTGCTGCTTTGTTTGGTTGGAATACTTTTTGGGGAAG
AAAAGCTATTATAAGTTATATTGCTCGTTATCCAGATGCTGAGCTTAGAAACGCCAAGAA
TGGTCAATTTGTGAAGATCTCTGGGGTTGTCACCTGCGGTAATGTTCCTCTTGAATCATC
CTTCCAAAAAGTTCCTAGATGTATATACACATCCACAAGTTTGTATGAGTACCGAGGATG
GGGTTCAAAAGCTGCCAACCCCACACATCGTCGTTTTACTTGGGGGCTCCGATCATTAGA
AAGGCGTGCGGTTGACTTCTATATCTCTGATTTCCAGTCTGGGTTAAGAGCATTGGTTAA
AACTGGGTATGGAGCAAGGGTGACTCCTTATGTTGACGATTCCCTTGCCATTGACGTCAA
TCCTGGCAAGGAAGAATTATCTCCGGAGTTCATCAGGTGGTTGGCGGAGAGGAATCTTTC
AAGTGATGATCGCATAATGCGACTGAAAGAGGGGTATATCAAAGAAGGAAGTACTGTTAG
TGTAATGGGAGTTGTTCAGAGGAATGACAACGTGCTCATGATTGTCCCTCCGCCTGAACC
TATCACAACAGGATGCCAATGGGCCAAATGTATTGTTCCAGCTAGCCTTGACGGAATTGT
ATTAAGATGCGAAGATGCCTCCAAGAACGACGTCATACCAGTTTAGTAGTACGTGCACCG
CGAGCTTTTTCCTTCTATTGCTTGTTTAAGATTATTTTTCCCCCATTAAAATTTGATGCC
GTGGATAGTGAAGGTGGTAGTAGTGTGAGGAGTAATGGTGATGATCGATCAGGCAGCATT
GTTTGTGGTAGTGTTTTTGCATAATACCTTCTTGTATAGATCTTTAAGGTTTCTTTGCCA
TTTATTTTTTCCTTTAGGGAGTGATGGCTTTTGTGGTCAAGGTTGGTTGAGTAGTAGGGG
ATCTAATGTGTGAGCAGATTGCGGTTATGTTAAATAGGAAAAAAAAAAAAAATTGTTGTG
AGATATCGAAGTACATTGTCTTTACAGACAATCTGTAGTGTTTATTTACTTTTTTAATGA
TGAAATTTGTATAAGATGAGCTTGTTGATATATATTTATATATACAGTTCATTTTGCATA
TGCCAATGTGATGCTTTCATCAATGGCAAATTC