Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g08620.1
CDS Infomation

gene=Cs1g08620
Sequence

ATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTCGCC
ATTACCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGCCCCCTCCCCGTC
CCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCTGCCTCCTCCGCATGGGCCAGCGCAACCTCGTCGTC
GTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAGTGGAGTTCGGATCA
CGAACGAGGAACGTCGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTCACA
GTGTACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAAC
AAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCAGCTT
ATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCGAGAGTCAGGATGAT
CCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAGAGGAGTCGGTTGGCCCAGAGCTTT
GAGTACAATTACGGTGATTTTATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAG
ATTTGTAAGGAAGTTAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGAT
CATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGTT
GAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGTGGGGAATTGCA
GAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGCAATGAACTTGACACCGTGCTT
GGTCCTGGTCATCAAATCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCCGTG
ATCAAGGAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTT
CACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGCG
TGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCAGGCCTGAGAGG
TTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAATGACTTCCGTTACCTTCCTTTC
GGTGTTGGGAGAAGAAGCTGCCCTGGAATTATCCTTGCTTTGCCAATTCTTGGTATCACT
ATTGGGCGTTTGGTACAGAACTTTGAGCTCTTGCCTCCTCCAGGTCAATCTAAGATTGAC
ACTGCAGAGAAAGGTGGGCAGTTCAGTTTGCACATTTTGAAGCACTCGACCATTGTTGCC
AAGCCTAGATCATTCTAG

Peptide Sequence

PEP ID

Cs1g08620.1
PEP Infomation
Sequence

MDLLLLEKTLLALFAAVVVAITVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLSD
LAKKYGDVCLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT
VYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQL
MMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLK
ICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIV
ENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAV
IKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKPEEFRPER
FLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKID
TAEKGGQFSLHILKHSTIVAKPRSF*

Transcript Sequence

Transcript ID

Cs1g08620.1
Transcript Infomation

gene=Cs1g08620 CDS=304-1821
Sequence

CAACTCTCCCCCTGACCCTAATAATAACCCCTTGCCCCTTACCCACCACCCCCTCGAAAA
GTCCAACCCAAAACCTTTCACCAGCTCCTCCAACCCACCGTTAAATGTAACGGCAGTCAA
TCCAAAATTCAATCGTCACCCACTCGATCTCTCAAAAGTATGACCACATGCTTCACCTAA
CACGTTACCGTCAAATTAGCACCCACGCACACCCACTTCATTTCTTGTTATAAATATAGT
CCACTTCCCCCAACCTCTCACTCACCCACTGGAGTCCCTGTATTCATTACGTTAATCGTA
AAGATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTC
GCCATTACCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGCCCCCTCCCC
GTCCCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCC
GACTTAGCCAAGAAATATGGAGATGTCTGCCTCCTCCGCATGGGCCAGCGCAACCTCGTC
GTCGTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAGTGGAGTTCGGA
TCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTC
ACAGTGTACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACG
AACAAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAG
GATGTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCAG
CTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCGAGAGTCAGGAT
GATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAGAGGAGTCGGTTGGCCCAGAGC
TTTGAGTACAATTACGGTGATTTTATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTG
AAGATTTGTAAGGAAGTTAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAG
GAGAGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATC
GATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATC
GTTGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGTGGGGAATT
GCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGCAATGAACTTGACACCGTG
CTTGGTCCTGGTCATCAAATCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCC
GTGATCAAGGAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAAC
CTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAAC
GCGTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCAGGCCTGAG
AGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAATGACTTCCGTTACCTTCCT
TTCGGTGTTGGGAGAAGAAGCTGCCCTGGAATTATCCTTGCTTTGCCAATTCTTGGTATC
ACTATTGGGCGTTTGGTACAGAACTTTGAGCTCTTGCCTCCTCCAGGTCAATCTAAGATT
GACACTGCAGAGAAAGGTGGGCAGTTCAGTTTGCACATTTTGAAGCACTCGACCATTGTT
GCCAAGCCTAGATCATTCTAGTTTCACAATTCCATTTGGTTGTAATGTTAAGTCTGTTTC
AAAGTGGTTGAATGGTTTCTTCAATGTCGGATCAAATCAAGTGGCAGTTGGCTAGTTATA
TAATACTTGTGTAAATTTGTGAACTTAAATCTTCAAATCTTCATTTAAGATTTGCAATAA
GTTTTATGTTTTGTTTCTTAATGCAATTACTAGAAATAAATTAATTCCGTCCTCGTTAAA
TCACTTTGTGATTAGTTGGAATGGCGTGTTCATAGCCTACAAAACATATTAATTAATT