Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g06230.1
CDS Infomation

gene=Cs1g06230
Sequence

ATGAAAAACAACAACAAAAGAAGCTTCGCAGGTAACCAAACAGAGATGAGAGACAAAAAG
GGATTCTTTAATAGCGTTGCCTCTGGTTCTGGGACTATCTTGCGTCCCTTGCATGATCTC
CTACACAGAAGTTCAGAGGAAGCGGCGGCTACTCCCAAATCGAAGATTTTAAACAACTAT
TACATTCCAAATTACATTCTTGTATCTGGATCGGAGGTTCAAAGATCTAGCCTCATACCA
TCTTGTCCGGTGCTAGTGTTCATCAACTCAAAAAGTGGCGGCCAGTTGGGCGGGAAGCTT
CTGCTCACTTACCGTTCCCTTCTTAATGAAAACCAGGTTATTGACTTGGGAGAAAAGGCA
CCTGATAAAGTGTTACATCAGCTTTATGTCACTTTAGAGAAGTTCAAGGCTGCAGGAGAT
GTTTTTGCTTCTGAAATTGAGAAGAGGTTGAGATTAATTGTTGCAGGCGGAGATGGTACG
GCTAGCTGGCTCCTTGGAGTTGTTAGTGATCTAAAACTACCTCATTCACCTCCAGTTGCG
ACAGTGCCACTAGGAACAGGAAACAACATCCCGTTCTCATTTGGCTGGGGAAAGAAAAAT
CCAAACACAGATCAACAAGCAGTGCTATCGTTCTTGGAACAAGTAAAGAATGCAAAGGAA
ATGCAAATTGACAGCTGGCATATTCTCATGAGAATGAAGGCTCCTAAAGAAGGATCTTTT
GATCCCATTGCACCTCTTGAACTACCTCATTCTTTGCACGCATTTCATCGTGTCTCTCAA
AAAGATAAACTGAATGTGGAGGGCCATCACACATTTCGTGGGGGATTTTGGAACTACTTC
AGCATGGGAATGGATGCTCAAGTATCATACGCATTTCACTCTGAGAGGAAGTTACACCCA
GAAAAATTCCAAAATCAATTAGTTAATCAGAGTACTTATTTGAAGCTTGCTGGTACTCAA
GGATGGTTTTTGGCTCCTCTATTGCATCCTTCTTCAAGAAACATCGCACAGATGGCAAAA
GTTAAAATTATGAAAAAGCAAGGCCAATGGGAGGAACTCCACATACCTCGCTACATTAGG
TCTATTGTCTGCCTTAACTTGCCCAGTTTTTCTGGTGGACTTGATCCTTGGGGGAAACCA
TTCAGGAAGAAACTACGTGAGAGAGGCTTGACTCCTCCATATGTTGATGATGGCCTGCTT
GAGATTGTTGGTTTTAGAGATGCATGGCATGGGCTTGTATTGCTTGCCCCTAATGGACAT
GGAACTCGTCTTGCTCAGGCAAACAGAGTCCGTTTTGAGTTTGAGAAGGGTGCTGCCGAT
CATACATTCATGAGGATTGATGGAGAGCCATGGAAACAACCTCTCCCCGTTGATGAGGAC
ACAGTTGTCGTAGAAATTTCCCACCTCCGCCAAGTGAACATGCTTGCCACCCCATGTTGC
CGCTCGAGAAGCATAAACGATGCCCCTTCTCCTGCAAGTATTATTGATGAAGATTGCGAA
AGTATCGAAGATGAATCTTCTGAAGATTGGGAAGAGAGGAGAAAATTCGGTGCAGCTGAC
ACATTTAAAATCCCAGAGGAGGTTGATATAACTCAGCTTAGCTGA

Peptide Sequence

PEP ID

Cs1g06230.1
PEP Infomation
Sequence

MKNNNKRSFAGNQTEMRDKKGFFNSVASGSGTILRPLHDLLHRSSEEAAATPKSKILNNY
YIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKA
PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVA
TVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSF
DPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHP
EKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIR
SIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGH
GTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATPCC
RSRSINDAPSPASIIDEDCESIEDESSEDWEERRKFGAADTFKIPEEVDITQLS*

Transcript Sequence

Transcript ID

Cs1g06230.1
Transcript Infomation

gene=Cs1g06230 CDS=78-1682
Sequence

AAATAATAAACAGACCAGAGTAGTTGATTTAAGACGAAACAATAAGAATAAGAGCAAACG
TCACGATAACATGATTCATGAAAAACAACAACAAAAGAAGCTTCGCAGGTAACCAAACAG
AGATGAGAGACAAAAAGGGATTCTTTAATAGCGTTGCCTCTGGTTCTGGGACTATCTTGC
GTCCCTTGCATGATCTCCTACACAGAAGTTCAGAGGAAGCGGCGGCTACTCCCAAATCGA
AGATTTTAAACAACTATTACATTCCAAATTACATTCTTGTATCTGGATCGGAGGTTCAAA
GATCTAGCCTCATACCATCTTGTCCGGTGCTAGTGTTCATCAACTCAAAAAGTGGCGGCC
AGTTGGGCGGGAAGCTTCTGCTCACTTACCGTTCCCTTCTTAATGAAAACCAGGTTATTG
ACTTGGGAGAAAAGGCACCTGATAAAGTGTTACATCAGCTTTATGTCACTTTAGAGAAGT
TCAAGGCTGCAGGAGATGTTTTTGCTTCTGAAATTGAGAAGAGGTTGAGATTAATTGTTG
CAGGCGGAGATGGTACGGCTAGCTGGCTCCTTGGAGTTGTTAGTGATCTAAAACTACCTC
ATTCACCTCCAGTTGCGACAGTGCCACTAGGAACAGGAAACAACATCCCGTTCTCATTTG
GCTGGGGAAAGAAAAATCCAAACACAGATCAACAAGCAGTGCTATCGTTCTTGGAACAAG
TAAAGAATGCAAAGGAAATGCAAATTGACAGCTGGCATATTCTCATGAGAATGAAGGCTC
CTAAAGAAGGATCTTTTGATCCCATTGCACCTCTTGAACTACCTCATTCTTTGCACGCAT
TTCATCGTGTCTCTCAAAAAGATAAACTGAATGTGGAGGGCCATCACACATTTCGTGGGG
GATTTTGGAACTACTTCAGCATGGGAATGGATGCTCAAGTATCATACGCATTTCACTCTG
AGAGGAAGTTACACCCAGAAAAATTCCAAAATCAATTAGTTAATCAGAGTACTTATTTGA
AGCTTGCTGGTACTCAAGGATGGTTTTTGGCTCCTCTATTGCATCCTTCTTCAAGAAACA
TCGCACAGATGGCAAAAGTTAAAATTATGAAAAAGCAAGGCCAATGGGAGGAACTCCACA
TACCTCGCTACATTAGGTCTATTGTCTGCCTTAACTTGCCCAGTTTTTCTGGTGGACTTG
ATCCTTGGGGGAAACCATTCAGGAAGAAACTACGTGAGAGAGGCTTGACTCCTCCATATG
TTGATGATGGCCTGCTTGAGATTGTTGGTTTTAGAGATGCATGGCATGGGCTTGTATTGC
TTGCCCCTAATGGACATGGAACTCGTCTTGCTCAGGCAAACAGAGTCCGTTTTGAGTTTG
AGAAGGGTGCTGCCGATCATACATTCATGAGGATTGATGGAGAGCCATGGAAACAACCTC
TCCCCGTTGATGAGGACACAGTTGTCGTAGAAATTTCCCACCTCCGCCAAGTGAACATGC
TTGCCACCCCATGTTGCCGCTCGAGAAGCATAAACGATGCCCCTTCTCCTGCAAGTATTA
TTGATGAAGATTGCGAAAGTATCGAAGATGAATCTTCTGAAGATTGGGAAGAGAGGAGAA
AATTCGGTGCAGCTGACACATTTAAAATCCCAGAGGAGGTTGATATAACTCAGCTTAGCT
GAAAATACCAACAGCTAAGCCTGGGTACATATGTACATAATACAGCGTGTCGATCAATCT
TCTTTTTCTTTATTTCATTAGTAATTAGCATTTAGATTAATTTTGATTATGGTTTTAACT
GATTGATGTTGTTTCTTCTTCCCTGTAAAGTTCTGTTTGTAATATACGGTACGGTTGGAA
TTGATGAGTCGCTCTCTTTAATTAATGTTTCATTGGTCTCATATTAGAAAGCT