Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g06150.2
CDS Infomation

gene=Cs1g06150
Sequence

ATGCAGGTAAGATTGGCAGTTGATGCGATTTTAATGGCTGAGGGTGCCGAGCGAAAAGAG
CAAGTTGCTGCCTGGACAGCTGATAAGAAGCAAACCAGTGCATATGCAATGAATTTGCAG
CAGATAGACAATGGTGTTATCATCCCGCCGTCTGGTTGGAAATGTGCTAAGTGTGACAAA
AGGGATAACCTCTGGCTGAATCTTACTGATGGAATGATACTGTGTGGAAGGAGAAATTGG
GATGGAACTGGTGGCAATAACCATGCTGTTGAACACTACAAGGAGACAGGCTACCCTCTT
GCTGTAAAGCTTGGGACAATTACTTCTGACCTGGAAGGAGCAGATGTTTTCTCCTATCCA
GAGGATGATAGTGTTGTGGATCCACTTTTAGCTCAGCATCTGGCTTTTTTTGGCATTGAC
TTTTCATCATTACAGAAGACGGAAATGACAACCGCTGAAAGAGAACTTGACCAAAATACC
AACTTTGACTGGAATCGCATTCAAGAAAGTGGACAGGATGTAGAACCACTTTTTGGACCC
GGATATACAGGACTTGTAAATCTTGGAAACAGCTGCTACTTGGCAGCAACTATGCAAGTT
ATGTTCTCAACACATGCCTTCTGCACACGTTACTACACGCAGGAGCCATTAAAAGCCGCT
TTTGAGGCAGCACCTGCTGATCCGACTGTGGACCTAAATATGCAGTTGACAAAGCTGGCA
CATGGTTTGCTGTCTGGAAAATACTCTGTTCCAGCACAGGAGAAAGATGCTGCTGCCAAT
GCTGCTACCACAACGGACACAAAACAGGAAGGAATACCTCCTCGTATGTTTAAAGCAGTA
ATTGCTGCCAGCCATCCCGAATTCTCTTCCATGAGACAGCAGGACGCTTTGGAATTCTTT
CTCCATTTTGTTGACCAAGTTGAACGTGTTCATTCTGGAAAACCCGAAGTGGATCCCACA
AAGAGTTTCAAGTTTGGCATTGAAGAACGTATCTCATGTCCGTCCGGCAAGGTTGCATAT
AATAGAAGGCTTGATTACATTCTTTCTTTGGGTATTCCTCTGGATGAAGCTACCAATAAA
GAAGAACTGGCAGCATTCCAGAAATTGAAAATGGAAAGGATTTCAGAAGGGAAGGATGTA
ACTAATGAGGAGATTGTTCGCCCGAGGGTACCTCTAGAAGCATGCCTATCAACTTTTTCA
GCTCCAGAGGAGCTTCCTGACTTTTACAGCACTGCCTTGAAAGCTAAGACAACAGCCACC
AAGTCTGCTGGTTTGACTTCATTCCCTGATTATTTGGTGTTGCACATGCGGAAATTTGTG
ATGGAGGCAGGCTGGGTTCCCAAGAAGCTTGATGTTTATATAGATGTTCCAGATATCATT
GATATAAGTCACATGCGCAGCAAGGGCCTTCAGCCTGGGGAGGAGCTGTTACCAGAGGGA
GGGCCTGAGGATGAGGTGCAGTCAAATAAGCCTGTTGCCAACAAGGATATTGTTTCCCAG
CTTGTGTCCATGGGGTTTAACCATCTTCATTGTGAGAAAGCGGCTGTGAATACCTCAAAT
GCTGGAGTAGAGGAGGCAATGAATTGGTTACTTTCTCATATGGATGATCCAGATATAGAT
ATGCCTCTTTCCCAAGAGACACAATGTGCAGCAATTGACCAATCAAAAGTTGAGACTTTG
CTCTCATTTGGTTTCTCAGAAGAAGTTGCTAGGAATGCATTGAAGGCATCGGGTGGTGAC
ATTGAAAAAGCAACAGATTGGATATTTAACAATCCTGATGCTTCTACTTCCTCGGATATG
GATGCTGCTACTTCAAGCACAGCACAAACTCCAGCTGACGCTGGTCTTCCAGATGGAGGA
GGGAAATACCGGCTTTTTGGAATAGTGAGCCATATTGGAACCTCTACACAATGTGGCCAC
TATGTTGCTCATATCTTAAAGGATGGTAGATGGGCTATTTTCAACGATAACAAGGTTGGA
GCTTCTGTTGATCCACCTAAAGAGATGGGGTATTTGTATTTCTTTGAAAGGCTTAACAGC
TAA

Peptide Sequence

PEP ID

Cs1g06150.2
PEP Infomation
Sequence

MQVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWKCAKCDK
RDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGADVFSYP
EDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVEPLFGP
GYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLA
HGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFF
LHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIPLDEATNK
EELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYSTALKAKTTAT
KSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQPGEELLPEG
GPEDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID
MPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPDASTSSDM
DAATSSTAQTPADAGLPDGGGKYRLFGIVSHIGTSTQCGHYVAHILKDGRWAIFNDNKVG
ASVDPPKEMGYLYFFERLNS*

Transcript Sequence

Transcript ID

Cs1g06150.2
Transcript Infomation

gene=Cs1g06150 CDS=59-2101
Sequence

TGTTGAATCCTTTCTTGCATCTGAAGTAGAGATCTTAGAATATATTTCTTGTTAAAAAAT
GCAGGTAAGATTGGCAGTTGATGCGATTTTAATGGCTGAGGGTGCCGAGCGAAAAGAGCA
AGTTGCTGCCTGGACAGCTGATAAGAAGCAAACCAGTGCATATGCAATGAATTTGCAGCA
GATAGACAATGGTGTTATCATCCCGCCGTCTGGTTGGAAATGTGCTAAGTGTGACAAAAG
GGATAACCTCTGGCTGAATCTTACTGATGGAATGATACTGTGTGGAAGGAGAAATTGGGA
TGGAACTGGTGGCAATAACCATGCTGTTGAACACTACAAGGAGACAGGCTACCCTCTTGC
TGTAAAGCTTGGGACAATTACTTCTGACCTGGAAGGAGCAGATGTTTTCTCCTATCCAGA
GGATGATAGTGTTGTGGATCCACTTTTAGCTCAGCATCTGGCTTTTTTTGGCATTGACTT
TTCATCATTACAGAAGACGGAAATGACAACCGCTGAAAGAGAACTTGACCAAAATACCAA
CTTTGACTGGAATCGCATTCAAGAAAGTGGACAGGATGTAGAACCACTTTTTGGACCCGG
ATATACAGGACTTGTAAATCTTGGAAACAGCTGCTACTTGGCAGCAACTATGCAAGTTAT
GTTCTCAACACATGCCTTCTGCACACGTTACTACACGCAGGAGCCATTAAAAGCCGCTTT
TGAGGCAGCACCTGCTGATCCGACTGTGGACCTAAATATGCAGTTGACAAAGCTGGCACA
TGGTTTGCTGTCTGGAAAATACTCTGTTCCAGCACAGGAGAAAGATGCTGCTGCCAATGC
TGCTACCACAACGGACACAAAACAGGAAGGAATACCTCCTCGTATGTTTAAAGCAGTAAT
TGCTGCCAGCCATCCCGAATTCTCTTCCATGAGACAGCAGGACGCTTTGGAATTCTTTCT
CCATTTTGTTGACCAAGTTGAACGTGTTCATTCTGGAAAACCCGAAGTGGATCCCACAAA
GAGTTTCAAGTTTGGCATTGAAGAACGTATCTCATGTCCGTCCGGCAAGGTTGCATATAA
TAGAAGGCTTGATTACATTCTTTCTTTGGGTATTCCTCTGGATGAAGCTACCAATAAAGA
AGAACTGGCAGCATTCCAGAAATTGAAAATGGAAAGGATTTCAGAAGGGAAGGATGTAAC
TAATGAGGAGATTGTTCGCCCGAGGGTACCTCTAGAAGCATGCCTATCAACTTTTTCAGC
TCCAGAGGAGCTTCCTGACTTTTACAGCACTGCCTTGAAAGCTAAGACAACAGCCACCAA
GTCTGCTGGTTTGACTTCATTCCCTGATTATTTGGTGTTGCACATGCGGAAATTTGTGAT
GGAGGCAGGCTGGGTTCCCAAGAAGCTTGATGTTTATATAGATGTTCCAGATATCATTGA
TATAAGTCACATGCGCAGCAAGGGCCTTCAGCCTGGGGAGGAGCTGTTACCAGAGGGAGG
GCCTGAGGATGAGGTGCAGTCAAATAAGCCTGTTGCCAACAAGGATATTGTTTCCCAGCT
TGTGTCCATGGGGTTTAACCATCTTCATTGTGAGAAAGCGGCTGTGAATACCTCAAATGC
TGGAGTAGAGGAGGCAATGAATTGGTTACTTTCTCATATGGATGATCCAGATATAGATAT
GCCTCTTTCCCAAGAGACACAATGTGCAGCAATTGACCAATCAAAAGTTGAGACTTTGCT
CTCATTTGGTTTCTCAGAAGAAGTTGCTAGGAATGCATTGAAGGCATCGGGTGGTGACAT
TGAAAAAGCAACAGATTGGATATTTAACAATCCTGATGCTTCTACTTCCTCGGATATGGA
TGCTGCTACTTCAAGCACAGCACAAACTCCAGCTGACGCTGGTCTTCCAGATGGAGGAGG
GAAATACCGGCTTTTTGGAATAGTGAGCCATATTGGAACCTCTACACAATGTGGCCACTA
TGTTGCTCATATCTTAAAGGATGGTAGATGGGCTATTTTCAACGATAACAAGGTTGGAGC
TTCTGTTGATCCACCTAAAGAGATGGGGTATTTGTATTTCTTTGAAAGGCTTAACAGCTA
ATTTTGCAAGGCAGAATGATGAAAGACGGGAAATATTTAACAGCAAAAAGAGATGGGGGT
AATATGGTTCTTGGAATTCAGCAGCCAGCAATCTTGTGCTCTAAGCCTTGACATGGAGTT
GCTTGCCCGTGCTTCAAGCATGAATTTTTTCGATGTGCTGCACAATTGTTGTTGACTGTT
TGTGCAGCCAGGTGTGCTCGAGTAGTGTACCTATACCTGACCCCCTTTCTTTCTTGCGCA
TACTAAGTATTATATTATTTCCTTTTTCTTGAATCAAAAGTTGCCAACAATTACTTGTAG
CTGAACGGTAATGTTCACATTTTTGTACTATTAAGAGGTTTCTCTGTTCAGACTGAGTTC
TCTCTATAGATTTGCTGCTTTTAGTTTGTTTCTTTCATTATACATTTATACTCCCCCTCT
CTCCTCTTCATTTCTCCTGATCATGCCCAGTATTGATAAAATTGATGTTATATT