Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g04430.1
CDS Infomation

gene=Cs1g04430
Sequence

ATGAAATGTGAAGGAGCCACAAGCGTAAGAGCACTTGTATTACAGAGTCTCAAAAATGGA
TTTTTGCCTCATATGAAGTGGGTTTCAGCTTCTGGTTTGCTTGGTATTTTGGGTGTCGCT
GGTTTTGTCTTGGCTTTGAAAAAAGATGCCAAAATTGGAAACTTGAGTGGCTTTTCATGG
CTATCTGAGAAAGAGAATCGTTTGGAGAAGTTGTGCTTAGTACCTGGATTGCAGAATCTT
GGAAATAATTGTTTTTTGAATGTTATATTGCAGGCTCTAGCTAGTTGCACATGCTTTCTA
CCTTTCCTTCAAAAGGTTATGGGGGAGTGTGAGGAACCAGATGAAGACTTGCCGCTTACA
GTAGCTTTGGCTTCCTTGTTAGAAGAGTTATGTTTAGTTGGTGAAACAAGGCTTGTATTA
AGTCCGCAAAAAGTGATGCTTGCTATGGAACTTTATATTCAAAACTTCAATCTAACAAGC
CAGCAGGATGCAGAAGAAGCATTTCTTCATCTTATGTCCTCTTTAAGGGAAGAATTTTTG
GAGTCTTATAGTCCAAATGAAAGTTCTCTGGTGGATGCTTTTGAAGCTGCAAGTTGTCGA
ATTCTTTCTCTAAAAAGGAGGGAGGTCCAGAGTGAGCAGAAAAGATGGAGGAAACACTTC
TTTGGGCCATTTGATGGGATTCTTGGTAGCATTTTAACTTGTCAGAGTTGTTTATCTCAG
ATTTCACTGGACTATCAATTTTTTCACAGCTTACCTCTTTCACCCGTGCTGGATAGTGGT
TCCACTATTCCATTTGGATGCACACTGGAGGATTGCCTAAAGCAGTTTCTCACTGCCGAA
CAACTTGAGAATTACCACTGCAGCCACTGCTGGCACATTGCTGCAATAAAGTATTTATCT
ATAACAGAAGCAAATGAGATGGAGATTGAAGAACTCAGGAGATGTAGTGCACAAGATTCC
TGCAACTGTCGTAGTCGTCTTCATCTTGAAACACTGCCATGGTCCAATAAATTCTCCCAC
ACTCTTAAGAAACTAAGCATCTCTCATTGTCCACAGATTTTATGCATTCATCTACAACGT
GTTTCTATAAATGAGATGGGAGAACTAGTCAAAATCTGGGGCCATATTGCTTTTCCATTG
ATTTTGGACCTGTTTCCATTCGTTAAAAGTGGAGTAGGAATAAATGACTTGGATGAAAGT
TGGCAAAGAGGGCAAGCAAAAGTACTAAATGAGAGACCAAGCTCTTCTCTCAACCATGTT
AACAGGAAATATGATGCAAAAGTGCTAAATTCTATTTATGGACTTACGGGAAAAAATAAT
CACACAAAAGCGTTAGGTGTAGATGAACTTGGTTGCACTGCACATGAGAAAGAATTTCGG
GGAGAATCCATATTGCCCCCGACTCAAAGCGGTTCCAATGTTAGAGGCAGAGATATCCAG
ATGCAACCAGATGATGAGGTGATTGGATCTTCTCAGTTATGCCAACCAAATACTTATCTG
TATCGTCTTGCTTCGGTTGTGGAGCACTTTGGAAGAGTTGGAAGTGGGCATTATACTGTT
TACAGGAGTGTGAGAGTAGAGTCGCATGAAGAAAATCCTAATGAGCATTTTGAGACACCT
CTTACACATTGGTTTTGTATTTCAGATTCTCAAGTGTATAGTGTGTCAGTAAACGACGTC
CTAGCTGCAGAGGCTAGCCTACTCTTCTACGAGAGAATTATAGAAAGCTGA

Peptide Sequence

PEP ID

Cs1g04430.1
PEP Infomation
Sequence

MKCEGATSVRALVLQSLKNGFLPHMKWVSASGLLGILGVAGFVLALKKDAKIGNLSGFSW
LSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLT
VALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFL
ESYSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQ
ISLDYQFFHSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLS
ITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQR
VSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNHV
NRKYDAKVLNSIYGLTGKNNHTKALGVDELGCTAHEKEFRGESILPPTQSGSNVRGRDIQ
MQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETP
LTHWFCISDSQVYSVSVNDVLAAEASLLFYERIIES*

Transcript Sequence

Transcript ID

Cs1g04430.1
Transcript Infomation

gene=Cs1g04430 CDS=1-1731
Sequence

ATGAAATGTGAAGGAGCCACAAGCGTAAGAGCACTTGTATTACAGAGTCTCAAAAATGGA
TTTTTGCCTCATATGAAGTGGGTTTCAGCTTCTGGTTTGCTTGGTATTTTGGGTGTCGCT
GGTTTTGTCTTGGCTTTGAAAAAAGATGCCAAAATTGGAAACTTGAGTGGCTTTTCATGG
CTATCTGAGAAAGAGAATCGTTTGGAGAAGTTGTGCTTAGTACCTGGATTGCAGAATCTT
GGAAATAATTGTTTTTTGAATGTTATATTGCAGGCTCTAGCTAGTTGCACATGCTTTCTA
CCTTTCCTTCAAAAGGTTATGGGGGAGTGTGAGGAACCAGATGAAGACTTGCCGCTTACA
GTAGCTTTGGCTTCCTTGTTAGAAGAGTTATGTTTAGTTGGTGAAACAAGGCTTGTATTA
AGTCCGCAAAAAGTGATGCTTGCTATGGAACTTTATATTCAAAACTTCAATCTAACAAGC
CAGCAGGATGCAGAAGAAGCATTTCTTCATCTTATGTCCTCTTTAAGGGAAGAATTTTTG
GAGTCTTATAGTCCAAATGAAAGTTCTCTGGTGGATGCTTTTGAAGCTGCAAGTTGTCGA
ATTCTTTCTCTAAAAAGGAGGGAGGTCCAGAGTGAGCAGAAAAGATGGAGGAAACACTTC
TTTGGGCCATTTGATGGGATTCTTGGTAGCATTTTAACTTGTCAGAGTTGTTTATCTCAG
ATTTCACTGGACTATCAATTTTTTCACAGCTTACCTCTTTCACCCGTGCTGGATAGTGGT
TCCACTATTCCATTTGGATGCACACTGGAGGATTGCCTAAAGCAGTTTCTCACTGCCGAA
CAACTTGAGAATTACCACTGCAGCCACTGCTGGCACATTGCTGCAATAAAGTATTTATCT
ATAACAGAAGCAAATGAGATGGAGATTGAAGAACTCAGGAGATGTAGTGCACAAGATTCC
TGCAACTGTCGTAGTCGTCTTCATCTTGAAACACTGCCATGGTCCAATAAATTCTCCCAC
ACTCTTAAGAAACTAAGCATCTCTCATTGTCCACAGATTTTATGCATTCATCTACAACGT
GTTTCTATAAATGAGATGGGAGAACTAGTCAAAATCTGGGGCCATATTGCTTTTCCATTG
ATTTTGGACCTGTTTCCATTCGTTAAAAGTGGAGTAGGAATAAATGACTTGGATGAAAGT
TGGCAAAGAGGGCAAGCAAAAGTACTAAATGAGAGACCAAGCTCTTCTCTCAACCATGTT
AACAGGAAATATGATGCAAAAGTGCTAAATTCTATTTATGGACTTACGGGAAAAAATAAT
CACACAAAAGCGTTAGGTGTAGATGAACTTGGTTGCACTGCACATGAGAAAGAATTTCGG
GGAGAATCCATATTGCCCCCGACTCAAAGCGGTTCCAATGTTAGAGGCAGAGATATCCAG
ATGCAACCAGATGATGAGGTGATTGGATCTTCTCAGTTATGCCAACCAAATACTTATCTG
TATCGTCTTGCTTCGGTTGTGGAGCACTTTGGAAGAGTTGGAAGTGGGCATTATACTGTT
TACAGGAGTGTGAGAGTAGAGTCGCATGAAGAAAATCCTAATGAGCATTTTGAGACACCT
CTTACACATTGGTTTTGTATTTCAGATTCTCAAGTGTATAGTGTGTCAGTAAACGACGTC
CTAGCTGCAGAGGCTAGCCTACTCTTCTACGAGAGAATTATAGAAAGCTGA