Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g03540.1
CDS Infomation

gene=Cs1g03540
Sequence

ATGTCACAAATTAACGGCAGTGGCAGCGACGGGCACCATTCTGCTTCAGCTAGGCGGACT
CCCACTCCCGGAAAGGCAACTGTTCTTGCTATTGGCAAGGCCTTCCCTAGTCAGCTCATT
CCTCAGGAATGCTTGGTTGAGGGCTACCTTCGGGACACTAAATGTGAAGATGAGTCCATC
AAGGAGAAACTTGAACGCCTGTGTAAAACCACTACTGTGAAGACAAGATACACCGTCATG
TCCAAGGCGATCCTGGACAAATATCCTGAACTGACAACCGAGGGCTCAGCAACCATCAAA
CAAAGACTTGAAATAGCAAACCCAGCAGTGGTAGAGATGGCCTTGGAAGCAAGCCTTGCT
TGCATTAAGGAATGGGGGAGGCCTGCGGAAGACATCACTCACATTGTCTATGTTTCATCC
AGTGAGATTCGTCTACCCGGTGGCGATCTCTACCTCTCCAGCAAGCTTGGCCTTAGGAGT
GATGTTGGCCGAGTAATGCTTTACTTTCTGGGCTGTTATGGCGGTGTCACTGGCCTCCGT
GTTGCTAAAGACATAGCTGAAAACAACCCTGGAAGCCGCGTTTTGCTTACCACTTCTGAA
ACTACCATACTTGGGTTTCGCCCACCAAACAAGTCCCGCCCTTATGACCTTGTTGGGGCA
GCTCTCTTTGGTGATGGAGCTGCTGCTGTGATCGTTGGAGCTGACCCATTCCTCGATAAA
GAGTCTTCTCCTTTCATGGAACTTAACTATGCAGTCCAACAATTCTTACCAGGGACACAG
AATGTCATCGATGGGCGTCTTTCTGAAGAGGGTATAAACTTCAAGCTTGGCAGGGACCTT
CCTCAGAAGATTGAAGAAAATATTGAGGAGTTTTGCAAGAAGCTCATGGCCAAAGCTGGT
TTACAAGATTTCAATGATTTGTTCTGGGCAGTTCATCCTGGAGGACCGGCAATTCTGAAC
CGACTGGAAAGCAATCTCAAGTTGAATAATCAGAAGCTTGAATGCAGCAGGAGGGCATTG
ATGGATTATGGGAATGTGAGCAGCAACACTATCTTTTATGTTATGGATTATATGAGGGAG
GAGTTGAAGAGGAAAGGAGATGAGGAATGGGGACTTGCTTTAGCTTTTGGACCTGGCATT
ACATTTGAAGGCATCCTTCTCCGTGGCCTGTGA

Peptide Sequence

PEP ID

Cs1g03540.1
PEP Infomation
Sequence

MSQINGSGSDGHHSASARRTPTPGKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDESI
KEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLA
CIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLR
VAKDIAENNPGSRVLLTTSETTILGFRPPNKSRPYDLVGAALFGDGAAAVIVGADPFLDK
ESSPFMELNYAVQQFLPGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAG
LQDFNDLFWAVHPGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMRE
ELKRKGDEEWGLALAFGPGITFEGILLRGL*

Transcript Sequence

Transcript ID

Cs1g03540.1
Transcript Infomation

gene=Cs1g03540 CDS=148-1320
Sequence

ATAATTTTCATGCTAGACTTCCTTGACACCAACCTCTCTCCAGTACTAAACTGATCTCCC
ATTTATATCCGCCTGCCATGCGAAAACATGTACATTTAACATTTCCATCATAACTGAACA
TTCTTGTCTTCCGGCCCCGACTTCAAGATGTCACAAATTAACGGCAGTGGCAGCGACGGG
CACCATTCTGCTTCAGCTAGGCGGACTCCCACTCCCGGAAAGGCAACTGTTCTTGCTATT
GGCAAGGCCTTCCCTAGTCAGCTCATTCCTCAGGAATGCTTGGTTGAGGGCTACCTTCGG
GACACTAAATGTGAAGATGAGTCCATCAAGGAGAAACTTGAACGCCTGTGTAAAACCACT
ACTGTGAAGACAAGATACACCGTCATGTCCAAGGCGATCCTGGACAAATATCCTGAACTG
ACAACCGAGGGCTCAGCAACCATCAAACAAAGACTTGAAATAGCAAACCCAGCAGTGGTA
GAGATGGCCTTGGAAGCAAGCCTTGCTTGCATTAAGGAATGGGGGAGGCCTGCGGAAGAC
ATCACTCACATTGTCTATGTTTCATCCAGTGAGATTCGTCTACCCGGTGGCGATCTCTAC
CTCTCCAGCAAGCTTGGCCTTAGGAGTGATGTTGGCCGAGTAATGCTTTACTTTCTGGGC
TGTTATGGCGGTGTCACTGGCCTCCGTGTTGCTAAAGACATAGCTGAAAACAACCCTGGA
AGCCGCGTTTTGCTTACCACTTCTGAAACTACCATACTTGGGTTTCGCCCACCAAACAAG
TCCCGCCCTTATGACCTTGTTGGGGCAGCTCTCTTTGGTGATGGAGCTGCTGCTGTGATC
GTTGGAGCTGACCCATTCCTCGATAAAGAGTCTTCTCCTTTCATGGAACTTAACTATGCA
GTCCAACAATTCTTACCAGGGACACAGAATGTCATCGATGGGCGTCTTTCTGAAGAGGGT
ATAAACTTCAAGCTTGGCAGGGACCTTCCTCAGAAGATTGAAGAAAATATTGAGGAGTTT
TGCAAGAAGCTCATGGCCAAAGCTGGTTTACAAGATTTCAATGATTTGTTCTGGGCAGTT
CATCCTGGAGGACCGGCAATTCTGAACCGACTGGAAAGCAATCTCAAGTTGAATAATCAG
AAGCTTGAATGCAGCAGGAGGGCATTGATGGATTATGGGAATGTGAGCAGCAACACTATC
TTTTATGTTATGGATTATATGAGGGAGGAGTTGAAGAGGAAAGGAGATGAGGAATGGGGA
CTTGCTTTAGCTTTTGGACCTGGCATTACATTTGAAGGCATCCTTCTCCGTGGCCTGTGA
TTGCTTTTCTTGCATTTAATTTTCAATTTTACAGCTTTTCGAGTTTCCACTTAATTTCAA
CTGCTTGTGCTAAATAATGTGGAAATCGAAAGATATTAGCATACTCGACTTACTGCACCA
GATATCTAAAAGAGTTTTATTGTTTTTCGTTAAAGTTAATGAGAAAACTCCGTGAGTACC
GCATAATACAAATGTTAAAACCTCGAGTGTAAACAAGGCATTGGGTTCGATCCAACTCAT
ATACTTGAAGAGAGAAATATGCTGTCATTG