Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g03080.1
CDS Infomation

gene=Cs1g03080
Sequence

ATGATACTTCAACCGAGTCTGCACAATCACCATAAGATTTGTCTCTCACAGTCACGCACT
CAACCTCTCCCCTGCAAAATCCCCAGATGTTTTACCCGTCTCCATCAGCAAAGTGCAATA
AAGCACCAGAGACAGAAGCTGCCGGTCATCAAATGCTCGATGTCACAAATTCACAGCTAT
GGAACAGTGGACTTCGAGAGAAGACCCATGATTAAATGGAACGCTATATTCAGGAAATTA
TCTCTTATGGACAACCCTCAACTGGGTTCTGCTTCTGTCTTGAATGATTGGGAGAAGGGC
GGCAGAAGCCTCACCAAATGGGAGCTTTGTAGGGTTGTCAAAGAGTTGAGGAAGTTCAGG
CGCTACAAACATGCTCTTGAGGTATATGACTGGATGAACAATAGAGGAGAGAGGTTCAGA
TTATCTGCGAGTGATGCTGCTATTCAATTAGACCTAATCGCCAAAGTGCATGGAGTTGCC
AGTGCTGAAGATTTTTTCCTAAGTCTTCCTGATACTTTGAAGGACAGGAGAGTATATGGG
GCTCTTTTGAATGCCTATGTGCGGGCTAGGATGAGAGGAAATGCTGAATTACTAATCGAC
AAAATGAGAGATAAAGGTTATGCTGTGCACTCACTTCCATACAATGTGATGATGACTCTT
TATATGAAAATCAAAGAATATGATGAAGTTGAGTCAATGGTTTCTGAAATGAAGGAGAAG
GGCATACGACTGGATGTATATTCTTACAACATTTGGTTATCATCTTGTGGATCCCAAGGA
TCCACAGAAAAGATGGAGGGGGTATTTGAACTGATGAAAGTGGATAAAGCCGTTAATCCG
AATTGGACTACATTTAGCACAATGGCAACAATGTATATTAAGATGGGACAGGTTGAAAAA
GCTGAGGAGAGCTTGAGGAGGGTTGAGAGTAGAATTACTGGTCGGGATAGGGTACCATAC
CACTATCTCTTAAGTCTATACGGCAGTGTTGGTAAAAAAGAGGAGGTGTATAGGGTGTGG
AATCTTTACAGATCAGTTTTTCCTGGTGTTACAAATTTGGGGTACCATGCCATGATCTCT
TCTTTGGCTAGGATTGGGGATATTGAAGGGATGGAAAAGATATTCGAGGAGTGGTTGTCA
GTAAAGTCATCTTATGACCCTAGGATAGCAAATCTTATGATGAGCTGGTATGTTAAAGAA
GGGAATTTTGATAAGGCTGAGGCTTTCTTTAATAGCATAATTGAAGAGGGAGGAAAGCCA
AACTCAACTTCATGGGAAACTCTTGCCGAAGGGCATATCAGAGAGAGGAGGATTCTGGAG
GCTTTGTCTTGCTTGAAGGGAGCTTTTGCAGCTGAGGGAGCCAAGAGTTGGAGGCCGAAG
CCTGTAAATGTCATTAACTTTTTCAAGGCTTGTGAGGAAGAATCTGATATGGGAAGCAAG
GAGGCCTTTGTAGCATTGTTAAGACAACCGGGTTACCGTAAAGAGAAAGATTATATGTCA
CTCATTGGCTTAACTGATGAAGCTGTTGCTGAAAATAACAAGAAGAATGATGAAGACAGT
GATGAAGATTCTGAAATGCTTCTCAGCCAACTGCAGTTTGCAGAATAG

Peptide Sequence

PEP ID

Cs1g03080.1
PEP Infomation
Sequence

MILQPSLHNHHKICLSQSRTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSY
GTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFR
RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG
ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK
GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK
AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS
SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP
NSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSK
EAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLSQLQFAE*

Transcript Sequence

Transcript ID

Cs1g03080.1
Transcript Infomation

gene=Cs1g03080 CDS=181-1788
Sequence

TGGACATCGAAAATTGAAGATAAAGAGCGAGGCATCAATGTAATTACCGCTCTCGACTTA
TCACTTATCTCCAAGGCCCCGAACGAAAGCAAGTCTCCTTCGTTTCACAGTTGACGGTCA
TTAAAAATTGTAAAGCTTGCCTTGGCTTGTCTCCTCGAAGGGTCTGAGAGAAAGAAAGAA
ATGATACTTCAACCGAGTCTGCACAATCACCATAAGATTTGTCTCTCACAGTCACGCACT
CAACCTCTCCCCTGCAAAATCCCCAGATGTTTTACCCGTCTCCATCAGCAAAGTGCAATA
AAGCACCAGAGACAGAAGCTGCCGGTCATCAAATGCTCGATGTCACAAATTCACAGCTAT
GGAACAGTGGACTTCGAGAGAAGACCCATGATTAAATGGAACGCTATATTCAGGAAATTA
TCTCTTATGGACAACCCTCAACTGGGTTCTGCTTCTGTCTTGAATGATTGGGAGAAGGGC
GGCAGAAGCCTCACCAAATGGGAGCTTTGTAGGGTTGTCAAAGAGTTGAGGAAGTTCAGG
CGCTACAAACATGCTCTTGAGGTATATGACTGGATGAACAATAGAGGAGAGAGGTTCAGA
TTATCTGCGAGTGATGCTGCTATTCAATTAGACCTAATCGCCAAAGTGCATGGAGTTGCC
AGTGCTGAAGATTTTTTCCTAAGTCTTCCTGATACTTTGAAGGACAGGAGAGTATATGGG
GCTCTTTTGAATGCCTATGTGCGGGCTAGGATGAGAGGAAATGCTGAATTACTAATCGAC
AAAATGAGAGATAAAGGTTATGCTGTGCACTCACTTCCATACAATGTGATGATGACTCTT
TATATGAAAATCAAAGAATATGATGAAGTTGAGTCAATGGTTTCTGAAATGAAGGAGAAG
GGCATACGACTGGATGTATATTCTTACAACATTTGGTTATCATCTTGTGGATCCCAAGGA
TCCACAGAAAAGATGGAGGGGGTATTTGAACTGATGAAAGTGGATAAAGCCGTTAATCCG
AATTGGACTACATTTAGCACAATGGCAACAATGTATATTAAGATGGGACAGGTTGAAAAA
GCTGAGGAGAGCTTGAGGAGGGTTGAGAGTAGAATTACTGGTCGGGATAGGGTACCATAC
CACTATCTCTTAAGTCTATACGGCAGTGTTGGTAAAAAAGAGGAGGTGTATAGGGTGTGG
AATCTTTACAGATCAGTTTTTCCTGGTGTTACAAATTTGGGGTACCATGCCATGATCTCT
TCTTTGGCTAGGATTGGGGATATTGAAGGGATGGAAAAGATATTCGAGGAGTGGTTGTCA
GTAAAGTCATCTTATGACCCTAGGATAGCAAATCTTATGATGAGCTGGTATGTTAAAGAA
GGGAATTTTGATAAGGCTGAGGCTTTCTTTAATAGCATAATTGAAGAGGGAGGAAAGCCA
AACTCAACTTCATGGGAAACTCTTGCCGAAGGGCATATCAGAGAGAGGAGGATTCTGGAG
GCTTTGTCTTGCTTGAAGGGAGCTTTTGCAGCTGAGGGAGCCAAGAGTTGGAGGCCGAAG
CCTGTAAATGTCATTAACTTTTTCAAGGCTTGTGAGGAAGAATCTGATATGGGAAGCAAG
GAGGCCTTTGTAGCATTGTTAAGACAACCGGGTTACCGTAAAGAGAAAGATTATATGTCA
CTCATTGGCTTAACTGATGAAGCTGTTGCTGAAAATAACAAGAAGAATGATGAAGACAGT
GATGAAGATTCTGAAATGCTTCTCAGCCAACTGCAGTTTGCAGAATAGCCTGTTTTATAT
ACATATAAAGCCTTCATTTGAGCCCAACCTGGAAGTTTTTACGGTAGCATTATGTTTCAA
AGTGCTTTCTCCTGCTCACACTGTCACAGCGGTCAGAAAATGTGGGAGTCGAAAACTTTC
TATGCTCCTTAGACGGTTGAGTAGACGTGTGAAGTTTAGACCCAATGGAGTTTCCTAATC
GTACTATTTGTTTAGTACCAGATCATAGGAATTTCGCCATAGCCTTATAATTGGTTCATA
GCTGATTAGTATTGCCGCTTTATTTAATGCTTTATCAGTTCCATTTTCTCTTTTTCAAAT
ATTTTTTGTGTTGTGTTTCTATTGATCTTTATATATTGAGCTCTGTCTTTAATGCTGTGA
GTACATTTTGGATTTAGATTCTGGAGTGGGGAGTCCTCAGAATCAATTTTTCACGTTCCT
TTAAAGTGGGCAGTGTAGGAGTCTGACT