Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g02760.1
CDS Infomation

gene=Cs1g02760
Sequence

ATGGCTTCTAAACCAGGAATCCTCACCGAATGGCCATGGAAACCTCTTGGAAGCTATAAG
CATGTGGTCCTGGCTCCATGGGCGATGCATAGCATATACTGTTTTATAGGGAGTAGAAAG
AGTGAGCGAGACTATGCTTACTTCCTGATATTCCCTTTTCTGCTGCTGAGGATGCTTCAT
GACCAGATTTGGATTTCTCTTTCACGTTACCGAACAGCCAAAAGAAACAACAGGATCGTT
GACAAGGCCATCGAATTCGACCAAGTTGACAGAGAAAGAAATTGGGATGACCAGATCGTG
TTCAATGGACTGATATTCTATATAGTCCGCATGCTAATTCCTCCAAGTTATTCAAACCTG
CGTTTCTGGAGAAGCGATGGTGTGATTCTTACGATTCTGGTGCATATGGGTCCGGTAGAG
TTTCTCTATTACTGGTTCCACAGAGCACTGCACCACCATTATCTCTACTCTCGCTACCAT
TCTCATCACCATTCTTCAGTTGTCACCGAGCCCATTACTTCTGTGATTCATCCATTCGCT
GAACACATTGTGTATTTCTTGCTCTTCGCAATACCACTGGTCACGACAATGGTCCTCAAA
AATGCTTCCATAGCATCTTTTGTTGGTTACATCATATACGTTGACTTCATGAACAACATG
GGCCACTGTAACTTCGAGTTTATCCCTATGTGGCTCTTCACCGTCTTTCCCCCTCTCAAG
TTTCTTATGTATACGCCCTCGTATCACTCGCTGCACCACACTCAATTTCGGACCAACTAC
TCGCTATTTATGCCAATTTATGACTACATATACGGTACAATAGACAGAAGTTCAGATTCA
GTGTACGAAAAATCACTAAAAAGATCAGGTGAAGAAGAAGAAGAATCAGCTGACGATGTG
GACGTGGTACATCTAACGCATCTAACGACGCCGGAATCAATTTATCATCTGCGGATAGGA
TTTGCCTCCTTGGCATCAAAGCCCCATCGCTATACCTATACATTATCACAGTGGTATCTA
CAGCTGTTGTGGCCTTTCACAGCTTCTTGTTCTGTCCTTGTGAGTTGGATCTATGGCCGG
ACTTTTGTTTCAGAGAGCAACACTTTGGACAAACTCAAATTGCAAACCTGGGTGGTACCA
AGGTACATTGTGCAATATAACTTGCCATGGAGAAGAGAAGCTATTAATAGCTTGATAGAA
GAAGCCATATTAGAAGCAGATGCGAAAGGGGTAAAAGTTATAAGTCTAGGGCTTCTGAAT
CAGGGAGAGGAGCTTAACAGAAACGGAGAGATATACCTGGAAAGACAACCTAATAAGCTA
AAAATCAAAGTGGTGGACGGAAGTAGCTTGGCAGCGGCGGTTGTGGTGAACAGCTTACCA
AAAACCACGGCCCACGTGCTTCTTAGAGGCACTGTTACGGCCAATAAGGTCGCTAACGCA
GTTGCCTCATCTCTATGCCAAATGGGCATCAAGGTGGCCACGATATGCAAGGACGATTAT
GAGAAGCTTAAGCTCAGGATCCCTGTGGAAGCTCAACATAATTTGGTCCTGTCAACAAGT
TACGCTGCTCACAAGACGAAGATTTGGTTAGTGGGAGACGATTTGACAGGAAAGGAACAA
GCAAGGGCACCAAAAGGCACAATATTCATTCCGTATACACAGATACCACCAAGGAAATTG
CGGAAAGATTGCTTCTACCATTCGACTCCAGCAATGATAATTCCTCCCTCTTTAAGTAAC
ATGCATTCCTGTGAGAACTGGCTGGGAAGGAGGGTGATGAGTGCTTGGCGTATAGCTGGA
ATAATACATGCCTTGGAGGGATGGGATTTGAACGAGTGTGGGCAAACTATGTGCGACATC
CACCAAGTTTGGCATGCCTCTCTCCGCCATGGATTCCGCCCTCTTTTCCCTGTTGCTTGA

Peptide Sequence

PEP ID

Cs1g02760.1
PEP Infomation
Sequence

MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLH
DQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNL
RFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFA
EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK
FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV
DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR
TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN
QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA
VASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQ
ARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAG
IIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA*

Transcript Sequence

Transcript ID

Cs1g02760.1
Transcript Infomation

gene=Cs1g02760 CDS=112-2031
Sequence

CAGACTTATAAAAGCCCTCCCGCTACAGGTACGTGCACTACCTGCAAATGCGCGTAAGCA
TTAATACTCAGGTTAAGCATAGCATAACAATAATAATAAATATATACACATATGGCTTCT
AAACCAGGAATCCTCACCGAATGGCCATGGAAACCTCTTGGAAGCTATAAGCATGTGGTC
CTGGCTCCATGGGCGATGCATAGCATATACTGTTTTATAGGGAGTAGAAAGAGTGAGCGA
GACTATGCTTACTTCCTGATATTCCCTTTTCTGCTGCTGAGGATGCTTCATGACCAGATT
TGGATTTCTCTTTCACGTTACCGAACAGCCAAAAGAAACAACAGGATCGTTGACAAGGCC
ATCGAATTCGACCAAGTTGACAGAGAAAGAAATTGGGATGACCAGATCGTGTTCAATGGA
CTGATATTCTATATAGTCCGCATGCTAATTCCTCCAAGTTATTCAAACCTGCGTTTCTGG
AGAAGCGATGGTGTGATTCTTACGATTCTGGTGCATATGGGTCCGGTAGAGTTTCTCTAT
TACTGGTTCCACAGAGCACTGCACCACCATTATCTCTACTCTCGCTACCATTCTCATCAC
CATTCTTCAGTTGTCACCGAGCCCATTACTTCTGTGATTCATCCATTCGCTGAACACATT
GTGTATTTCTTGCTCTTCGCAATACCACTGGTCACGACAATGGTCCTCAAAAATGCTTCC
ATAGCATCTTTTGTTGGTTACATCATATACGTTGACTTCATGAACAACATGGGCCACTGT
AACTTCGAGTTTATCCCTATGTGGCTCTTCACCGTCTTTCCCCCTCTCAAGTTTCTTATG
TATACGCCCTCGTATCACTCGCTGCACCACACTCAATTTCGGACCAACTACTCGCTATTT
ATGCCAATTTATGACTACATATACGGTACAATAGACAGAAGTTCAGATTCAGTGTACGAA
AAATCACTAAAAAGATCAGGTGAAGAAGAAGAAGAATCAGCTGACGATGTGGACGTGGTA
CATCTAACGCATCTAACGACGCCGGAATCAATTTATCATCTGCGGATAGGATTTGCCTCC
TTGGCATCAAAGCCCCATCGCTATACCTATACATTATCACAGTGGTATCTACAGCTGTTG
TGGCCTTTCACAGCTTCTTGTTCTGTCCTTGTGAGTTGGATCTATGGCCGGACTTTTGTT
TCAGAGAGCAACACTTTGGACAAACTCAAATTGCAAACCTGGGTGGTACCAAGGTACATT
GTGCAATATAACTTGCCATGGAGAAGAGAAGCTATTAATAGCTTGATAGAAGAAGCCATA
TTAGAAGCAGATGCGAAAGGGGTAAAAGTTATAAGTCTAGGGCTTCTGAATCAGGGAGAG
GAGCTTAACAGAAACGGAGAGATATACCTGGAAAGACAACCTAATAAGCTAAAAATCAAA
GTGGTGGACGGAAGTAGCTTGGCAGCGGCGGTTGTGGTGAACAGCTTACCAAAAACCACG
GCCCACGTGCTTCTTAGAGGCACTGTTACGGCCAATAAGGTCGCTAACGCAGTTGCCTCA
TCTCTATGCCAAATGGGCATCAAGGTGGCCACGATATGCAAGGACGATTATGAGAAGCTT
AAGCTCAGGATCCCTGTGGAAGCTCAACATAATTTGGTCCTGTCAACAAGTTACGCTGCT
CACAAGACGAAGATTTGGTTAGTGGGAGACGATTTGACAGGAAAGGAACAAGCAAGGGCA
CCAAAAGGCACAATATTCATTCCGTATACACAGATACCACCAAGGAAATTGCGGAAAGAT
TGCTTCTACCATTCGACTCCAGCAATGATAATTCCTCCCTCTTTAAGTAACATGCATTCC
TGTGAGAACTGGCTGGGAAGGAGGGTGATGAGTGCTTGGCGTATAGCTGGAATAATACAT
GCCTTGGAGGGATGGGATTTGAACGAGTGTGGGCAAACTATGTGCGACATCCACCAAGTT
TGGCATGCCTCTCTCCGCCATGGATTCCGCCCTCTTTTCCCTGTTGCTTGAATCTTCTAT
TATTATTATTATTATTATTATTATCATCATCATCATTATTGTAGACTCATAAACGCTAGC
TAGATAATTCGCTTTCGCAAATAATAAAGCTAACTATTATTAATATTATGTGAAAGAACA
TGATCGATTTTACTAT