Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g02690.1
CDS Infomation

gene=Cs1g02690
Sequence

ATGGCTTTATCAAACGTTTGCAATGAGGTTATCGTAAAGGAGAAGATAAAAAATGATCAG
GAAGAGGCTTGCACCCTTGATGGAGCTGTTGATCGGCATGGCCGCCCCGCAATCAAAAGA
AGAACTGGAACTTGGATTGCTGGAATTCTAATTTTAGTGAATCAAGGGCTGGCTACTTTG
GCATTTTTTGGGGTAGGAGTCAACTTGGTATTGTTTTTGACTAGGGTTGTGGGGCAGAAC
AATGCTGACGCGGCAAATAATGTCAGCAAATGGACAGGCACCGTCTATATTTTCTCTTTG
CTTGGCGCCTTCCTCAGTGACTCCTACTGGGGAAGATACAAAACTTGTGCCATCTTCCAG
GCCATCTTTGTCATTGGACTGGTATCATTATCAGTATCAAGCTACGCATTCTTACTGAAA
CCCAGTGGCTGCGGTGATGAAGGAAATCCATGTGGATCCCATTCATCCCTGCATATGGCG
TTGTTCTATCTGTCTATATACCTGACCGCCCTAGGAAATGGGGGATACCAACCAAATATA
GCTACATTTGGGGCAGATCAATTTGATGAAGAGGACCCCAAGGAAGGGCACTCTAAAATA
GCCTTTTTTAGCTACTTCTACTTGGCTTTGAACCTGGGATCCCTCTTTTCGAATACTATA
TTGGGATATTTTGAAGACGAAGGAATGTGGGCGCTGGGATTTTGGGCGTCAGCTGGCTCT
GCCACTATGGCACTCATCCTGTTTCTCATTGGGACTCCCAGATACAGGCACTTCAAACCC
ACTGGCAATCCTCTTTCCAGGATTTGCCAAGTGGTAGTTGCTGCAACTAGGAAATGGAAG
GTCCAGATCAGTGACGATGATCATGATCTCTTGTTTTACGAAAGAGATGGAATTAAACAG
ACTTCCCAGAATGGGGCTCGGAATATACTCCACACTCAAGGCTTCAAATTCTTGGATAAA
GCGGCTGTCATCACACGTAAATCTGACAATGATAAAAATAACGGGGGAGATGGGGAGAAT
ATCGATATGCGCAATCCATGGGTTCTTTGCACCGTGACTCAAGTGGAAGAAGTGAAATGC
ATTCTGAGACTCCTTCCAATCTGGCTATGCACGATACTCTACTCTGTAGTTTTCACTCAA
ATGGCATCTCTTTTCGTGGAACAAGGAGCTGCTATGAAAACAAACATTTCAACCTTCCAC
ATCCCACCGGCAAGCATGTCTAGTTTTGACATTCTGAGTGTTGCTGCTTTCATATTCATT
TACAGGCGAGTTCTAGACCCACTTGTTGAAAGACTAACGAGGAAGTCAGGGACAAGAGGT
TTCACTGAGCTTCAGAGAATGGGAGTTGGTCTTGTAATAGCTATAATGGCAATGATTTCA
GCAGGAGTTGTGGAAATATTCAGGTTGAAATACTCAATCAAAGATTGCAACAGTTGCGAA
AGCAAAGCAAGCACATTGAGCATATTTTGGCAAATTCCTCAGTATGTGCTAATAGGAGCA
TCAGAGGTGTTCATGTATGTGGGTCAGTTGGAGTTCTTCAATGGGCAGGCGCCAGATGGA
TTGAAGAGCTTTGGTAGTGCATTATGTATGACATCCATATCACTGGGAAATTACGTAAGT
AGTCTGCTTGTGACAATAGTGATGAAGATCTCTACAAGACCCGGTTGGATCCCGGGAAAC
CTAAACAAAGGACATCTAGACAGGTTTTATTTTCTACTAGCAGCTTTAACAACAGCTGAT
CTCTTTATCTACATCATATGCGCTAGATGGTACAAGTATATCAAGTTTGAGGAAAGGACT
GTGGGGGATAACGCACATGACATAATCGATCAGTGTGTGTGA

Peptide Sequence

PEP ID

Cs1g02690.1
PEP Infomation
Sequence

MALSNVCNEVIVKEKIKNDQEEACTLDGAVDRHGRPAIKRRTGTWIAGILILVNQGLATL
AFFGVGVNLVLFLTRVVGQNNADAANNVSKWTGTVYIFSLLGAFLSDSYWGRYKTCAIFQ
AIFVIGLVSLSVSSYAFLLKPSGCGDEGNPCGSHSSLHMALFYLSIYLTALGNGGYQPNI
ATFGADQFDEEDPKEGHSKIAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWASAGS
ATMALILFLIGTPRYRHFKPTGNPLSRICQVVVAATRKWKVQISDDDHDLLFYERDGIKQ
TSQNGARNILHTQGFKFLDKAAVITRKSDNDKNNGGDGENIDMRNPWVLCTVTQVEEVKC
ILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTNISTFHIPPASMSSFDILSVAAFIFI
YRRVLDPLVERLTRKSGTRGFTELQRMGVGLVIAIMAMISAGVVEIFRLKYSIKDCNSCE
SKASTLSIFWQIPQYVLIGASEVFMYVGQLEFFNGQAPDGLKSFGSALCMTSISLGNYVS
SLLVTIVMKISTRPGWIPGNLNKGHLDRFYFLLAALTTADLFIYIICARWYKYIKFEERT
VGDNAHDIIDQCV*

Transcript Sequence

Transcript ID

Cs1g02690.1
Transcript Infomation

gene=Cs1g02690 CDS=1-1842
Sequence

ATGGCTTTATCAAACGTTTGCAATGAGGTTATCGTAAAGGAGAAGATAAAAAATGATCAG
GAAGAGGCTTGCACCCTTGATGGAGCTGTTGATCGGCATGGCCGCCCCGCAATCAAAAGA
AGAACTGGAACTTGGATTGCTGGAATTCTAATTTTAGTGAATCAAGGGCTGGCTACTTTG
GCATTTTTTGGGGTAGGAGTCAACTTGGTATTGTTTTTGACTAGGGTTGTGGGGCAGAAC
AATGCTGACGCGGCAAATAATGTCAGCAAATGGACAGGCACCGTCTATATTTTCTCTTTG
CTTGGCGCCTTCCTCAGTGACTCCTACTGGGGAAGATACAAAACTTGTGCCATCTTCCAG
GCCATCTTTGTCATTGGACTGGTATCATTATCAGTATCAAGCTACGCATTCTTACTGAAA
CCCAGTGGCTGCGGTGATGAAGGAAATCCATGTGGATCCCATTCATCCCTGCATATGGCG
TTGTTCTATCTGTCTATATACCTGACCGCCCTAGGAAATGGGGGATACCAACCAAATATA
GCTACATTTGGGGCAGATCAATTTGATGAAGAGGACCCCAAGGAAGGGCACTCTAAAATA
GCCTTTTTTAGCTACTTCTACTTGGCTTTGAACCTGGGATCCCTCTTTTCGAATACTATA
TTGGGATATTTTGAAGACGAAGGAATGTGGGCGCTGGGATTTTGGGCGTCAGCTGGCTCT
GCCACTATGGCACTCATCCTGTTTCTCATTGGGACTCCCAGATACAGGCACTTCAAACCC
ACTGGCAATCCTCTTTCCAGGATTTGCCAAGTGGTAGTTGCTGCAACTAGGAAATGGAAG
GTCCAGATCAGTGACGATGATCATGATCTCTTGTTTTACGAAAGAGATGGAATTAAACAG
ACTTCCCAGAATGGGGCTCGGAATATACTCCACACTCAAGGCTTCAAATTCTTGGATAAA
GCGGCTGTCATCACACGTAAATCTGACAATGATAAAAATAACGGGGGAGATGGGGAGAAT
ATCGATATGCGCAATCCATGGGTTCTTTGCACCGTGACTCAAGTGGAAGAAGTGAAATGC
ATTCTGAGACTCCTTCCAATCTGGCTATGCACGATACTCTACTCTGTAGTTTTCACTCAA
ATGGCATCTCTTTTCGTGGAACAAGGAGCTGCTATGAAAACAAACATTTCAACCTTCCAC
ATCCCACCGGCAAGCATGTCTAGTTTTGACATTCTGAGTGTTGCTGCTTTCATATTCATT
TACAGGCGAGTTCTAGACCCACTTGTTGAAAGACTAACGAGGAAGTCAGGGACAAGAGGT
TTCACTGAGCTTCAGAGAATGGGAGTTGGTCTTGTAATAGCTATAATGGCAATGATTTCA
GCAGGAGTTGTGGAAATATTCAGGTTGAAATACTCAATCAAAGATTGCAACAGTTGCGAA
AGCAAAGCAAGCACATTGAGCATATTTTGGCAAATTCCTCAGTATGTGCTAATAGGAGCA
TCAGAGGTGTTCATGTATGTGGGTCAGTTGGAGTTCTTCAATGGGCAGGCGCCAGATGGA
TTGAAGAGCTTTGGTAGTGCATTATGTATGACATCCATATCACTGGGAAATTACGTAAGT
AGTCTGCTTGTGACAATAGTGATGAAGATCTCTACAAGACCCGGTTGGATCCCGGGAAAC
CTAAACAAAGGACATCTAGACAGGTTTTATTTTCTACTAGCAGCTTTAACAACAGCTGAT
CTCTTTATCTACATCATATGCGCTAGATGGTACAAGTATATCAAGTTTGAGGAAAGGACT
GTGGGGGATAACGCACATGACATAATCGATCAGTGTGTGTGACTTTTGAGGCGCGACTTA
ATTATGCCATTAAATTTTCCTCGTTATGTATAAAAATAAAAATGAAGTGAGGGAAATTTG
TGTTGTATTAGTATTATTGTATTCTGCCATGAAACTAGGGAAATGAGTTAATGCCTCGCT
CTTTTCATTTCTCTAGTTGAGCACACCACAAGCTGAAAGAACAATTAATTAATTATTCTC
TGCAAGCAAGCGTTGTTGTATTACTCAGTGGTGGTTGTATTAAACTCAATTACACATATC
ATGTATGTATTAAATAGTTATAATACAATAGATATATTCCATAA