Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g02600.2
CDS Infomation

gene=Cs1g02600
Sequence

ATGACGGAATTCATGGACCTAGAGGCGCAAGACGGGGTGAGGATGCCGTGGAACGTGATT
CCAGGGACGAAGCAAGAAGCAAGCAACTGCGTGGTGCCAGTCTCAGCCATCTACACTCCA
ATCAAGGCATTCCCTGTTAACAACAATAGCATGCCTATTCTGCCATATGCTCCCCTTCGG
TGTCGAACATGCCGCTCAATCCTCAATCCATTCTCCATAGTTGATTTTGCCGCCAAGATC
TGGATCTGTCCCTTCTGTTTCCAACGTAATCACTTCCCCCCTCACTACGCCTCCATCACC
GATGATAATCTTCCAGCTGAGCTCTTCCCTCAGTACACTACCATCGAGTACGAGCCTCCC
GGTCCCGGTGAGAAATCTTCAGTCCCTCCGGTTTTCATGTTTGTTGTTGACACTTGCATC
ATCGAAGAGGAGATGTCCTTTCTTAAGTCCGCTCTTTCTCAGGCCATCGATCTTTTGCCT
GACAATTCTCTCGTCGGTCTTATCACTTTTGGTACTCTAGTTCAAGTTCATGAATTAGGA
GGGTTTGGCCAGATCATCCCAAAGACCTATGTCTTCAAGGGTTCTAAGGACGTTTCAAAG
GACCAGCTTCTCGAGCAGTTGAATTTCTTTATCAAGAAGCCCAAGCCCTCTACGGGTGTC
ATTGCTGGTGTTAGAGATGGCCTGTCTTCTGATACCATTGCACGCTTCCTTGTGCCTGCC
TTTGATTGTGAATTCACTCTCAATTCTGTCCTTGAGGAGCTTCAGAAAGATCCTTGGCCT
GTTCCACCTGATCAGCGCTCTACCAGATGCACTGGCACCGCCTTAAGCATTGCTGCCAGT
TTATTAGGTGCTTGCGTTCCTGGTTCTGGTGCTAGAATCTTGGCTTTTGTTGGTGGTCCC
TCCACCGAGGGTCCTGCTGCGATTGTGTCCAAGAACCTATCCGAGCCAATTCGTTCACAC
AAGGATCTCGATAAAGATTCTGCTCCTCATTATCATAAAGCTGTCAAATTCTATGATGCA
CTCTCAAAGCAGCTTGTACATCAGGGACACGTTCTTGATCTCTTTGCTTGTGCCCTTGAC
CAGGTAGGGGTTGCTGAACTCAAAGTTGCAGTTGAGAAAACTGGAGGGCTTGTTGTGCTT
TCTGATAGTTTTGGCCATGCAGTATTCAAGGATTCCGTTAGGCGTGTTTTCCACTCTGGT
GACTATGATCTTGGACTATCATCAAATGGTATATTTGAGATTAACTGCTCCAAGGATATC
AAAGTTCAGGGTATTATTGGCCCCTGTGCATCTCTGGAAAAGAAAGGTCCTTTGTGCTCT
GATGCTGTTGTTGGTCAGGGTAATACCAGTGCATGGAAGATGTGTGGCCTTGATAAAGCT
ACATCTTTGTGTTTAGTTTTCGAAATTGTAAAGAAAGAAATCCCTGATGCTACTTTACAA
TCTACAAACAATCAATTTTACTTCCAATTTTTGACTTATTACCAACATAACTGTGGCCAA
ATGAGACTTCGTGTCACAACTCTTTCAAGAAGATGGGTTGCTGGACCAGGAAGCGTACAG
GACTTGATTGCTGGATTTGACCAAGAAGCAGCTGCTGTGGTAATGGCACGCTTAGTTTCT
TTCAAAATGGAAATTGAGGCCGAGTTTGACCCTATAAGATGGCTGGATAAAGCATTGATA
CATATGTGTTCTCGGTTTGGAGATTACCAGAAGGACAGCCCGTCTTCTTTCAGCTTATCT
CCTCGTTTTTCAATATTTCCTCAGTTTATGTTTCATTTACGGCGTTCGCAGTTTGTTCAG
GTCTTTAATAACAGCCCGGATGAGACAGCGTATTTTAGAATGATCCTGAACCGAGAAAAT
GTTACCAATTCCGTAGTGATGATTCAGCCTTCATTGATTTCTTATTCATTTCATTCAGGC
CCTGAACCTGCTCTCCTTGATGTTGCTGCCATTGCAGCCGACAGAATCCTGCTTTTAGAT
TCTTACTTCACTGTTGTCATCTTTCATGGTGCAACCATTGCTCAGTGGAGAAAAGCAGGA
TACCATAATCAACCTGAGCATCAGGCATTTGCACAGCTGCTGCAAGCTCCTCATGATGAT
GCCGGTGTGATAATGAAGGAAAGGTTTCCAGTACCTCGTCTTGTCATTTGTGATCAACAT
GGCTCACAGGCCCGCTTTCTTCTGGCAAAACTGAATCCTTCTGCAACTTATAACTCTGAT
GCTCAAATTCCAGGAGGGGACATCATATTTACTGATGATGTTAGCTTTGAGGTCTTTTTG
GATCACCTTCAGAGATTAGCAGTTCAATGA

Peptide Sequence

PEP ID

Cs1g02600.2
PEP Infomation
Sequence

MTEFMDLEAQDGVRMPWNVIPGTKQEASNCVVPVSAIYTPIKAFPVNNNSMPILPYAPLR
CRTCRSILNPFSIVDFAAKIWICPFCFQRNHFPPHYASITDDNLPAELFPQYTTIEYEPP
GPGEKSSVPPVFMFVVDTCIIEEEMSFLKSALSQAIDLLPDNSLVGLITFGTLVQVHELG
GFGQIIPKTYVFKGSKDVSKDQLLEQLNFFIKKPKPSTGVIAGVRDGLSSDTIARFLVPA
FDCEFTLNSVLEELQKDPWPVPPDQRSTRCTGTALSIAASLLGACVPGSGARILAFVGGP
STEGPAAIVSKNLSEPIRSHKDLDKDSAPHYHKAVKFYDALSKQLVHQGHVLDLFACALD
QVGVAELKVAVEKTGGLVVLSDSFGHAVFKDSVRRVFHSGDYDLGLSSNGIFEINCSKDI
KVQGIIGPCASLEKKGPLCSDAVVGQGNTSAWKMCGLDKATSLCLVFEIVKKEIPDATLQ
STNNQFYFQFLTYYQHNCGQMRLRVTTLSRRWVAGPGSVQDLIAGFDQEAAAVVMARLVS
FKMEIEAEFDPIRWLDKALIHMCSRFGDYQKDSPSSFSLSPRFSIFPQFMFHLRRSQFVQ
VFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSFHSGPEPALLDVAAIAADRILLLD
SYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQH
GSQARFLLAKLNPSATYNSDAQIPGGDIIFTDDVSFEVFLDHLQRLAVQ*

Transcript Sequence

Transcript ID

Cs1g02600.2
Transcript Infomation

gene=Cs1g02600 CDS=281-2590
Sequence

AAATAAATATAAAAAATAATGTAAACTCTTTTATCTGTATTTATTAGATTAAAATACGAA
AAACTAATATACAGAAGCGAGAGACGATGAATCAAAGGAAGGAACTCCAAAGAGGCAGCC
TAGCCTAGTAATATTGGAGGAGTAGTCGACCAAGGCTGTAAAGAGTGTAACGGCCTAAAA
GAATTAAAAAGAGGGAAGAGAGAGAGTGACCTTCTTCTTCGCTGGGTCGCAATCGCAAAC
AACATCCAGACGTGCTGAATTCAATTGAGGAAGAATAAAAATGACGGAATTCATGGACCT
AGAGGCGCAAGACGGGGTGAGGATGCCGTGGAACGTGATTCCAGGGACGAAGCAAGAAGC
AAGCAACTGCGTGGTGCCAGTCTCAGCCATCTACACTCCAATCAAGGCATTCCCTGTTAA
CAACAATAGCATGCCTATTCTGCCATATGCTCCCCTTCGGTGTCGAACATGCCGCTCAAT
CCTCAATCCATTCTCCATAGTTGATTTTGCCGCCAAGATCTGGATCTGTCCCTTCTGTTT
CCAACGTAATCACTTCCCCCCTCACTACGCCTCCATCACCGATGATAATCTTCCAGCTGA
GCTCTTCCCTCAGTACACTACCATCGAGTACGAGCCTCCCGGTCCCGGTGAGAAATCTTC
AGTCCCTCCGGTTTTCATGTTTGTTGTTGACACTTGCATCATCGAAGAGGAGATGTCCTT
TCTTAAGTCCGCTCTTTCTCAGGCCATCGATCTTTTGCCTGACAATTCTCTCGTCGGTCT
TATCACTTTTGGTACTCTAGTTCAAGTTCATGAATTAGGAGGGTTTGGCCAGATCATCCC
AAAGACCTATGTCTTCAAGGGTTCTAAGGACGTTTCAAAGGACCAGCTTCTCGAGCAGTT
GAATTTCTTTATCAAGAAGCCCAAGCCCTCTACGGGTGTCATTGCTGGTGTTAGAGATGG
CCTGTCTTCTGATACCATTGCACGCTTCCTTGTGCCTGCCTTTGATTGTGAATTCACTCT
CAATTCTGTCCTTGAGGAGCTTCAGAAAGATCCTTGGCCTGTTCCACCTGATCAGCGCTC
TACCAGATGCACTGGCACCGCCTTAAGCATTGCTGCCAGTTTATTAGGTGCTTGCGTTCC
TGGTTCTGGTGCTAGAATCTTGGCTTTTGTTGGTGGTCCCTCCACCGAGGGTCCTGCTGC
GATTGTGTCCAAGAACCTATCCGAGCCAATTCGTTCACACAAGGATCTCGATAAAGATTC
TGCTCCTCATTATCATAAAGCTGTCAAATTCTATGATGCACTCTCAAAGCAGCTTGTACA
TCAGGGACACGTTCTTGATCTCTTTGCTTGTGCCCTTGACCAGGTAGGGGTTGCTGAACT
CAAAGTTGCAGTTGAGAAAACTGGAGGGCTTGTTGTGCTTTCTGATAGTTTTGGCCATGC
AGTATTCAAGGATTCCGTTAGGCGTGTTTTCCACTCTGGTGACTATGATCTTGGACTATC
ATCAAATGGTATATTTGAGATTAACTGCTCCAAGGATATCAAAGTTCAGGGTATTATTGG
CCCCTGTGCATCTCTGGAAAAGAAAGGTCCTTTGTGCTCTGATGCTGTTGTTGGTCAGGG
TAATACCAGTGCATGGAAGATGTGTGGCCTTGATAAAGCTACATCTTTGTGTTTAGTTTT
CGAAATTGTAAAGAAAGAAATCCCTGATGCTACTTTACAATCTACAAACAATCAATTTTA
CTTCCAATTTTTGACTTATTACCAACATAACTGTGGCCAAATGAGACTTCGTGTCACAAC
TCTTTCAAGAAGATGGGTTGCTGGACCAGGAAGCGTACAGGACTTGATTGCTGGATTTGA
CCAAGAAGCAGCTGCTGTGGTAATGGCACGCTTAGTTTCTTTCAAAATGGAAATTGAGGC
CGAGTTTGACCCTATAAGATGGCTGGATAAAGCATTGATACATATGTGTTCTCGGTTTGG
AGATTACCAGAAGGACAGCCCGTCTTCTTTCAGCTTATCTCCTCGTTTTTCAATATTTCC
TCAGTTTATGTTTCATTTACGGCGTTCGCAGTTTGTTCAGGTCTTTAATAACAGCCCGGA
TGAGACAGCGTATTTTAGAATGATCCTGAACCGAGAAAATGTTACCAATTCCGTAGTGAT
GATTCAGCCTTCATTGATTTCTTATTCATTTCATTCAGGCCCTGAACCTGCTCTCCTTGA
TGTTGCTGCCATTGCAGCCGACAGAATCCTGCTTTTAGATTCTTACTTCACTGTTGTCAT
CTTTCATGGTGCAACCATTGCTCAGTGGAGAAAAGCAGGATACCATAATCAACCTGAGCA
TCAGGCATTTGCACAGCTGCTGCAAGCTCCTCATGATGATGCCGGTGTGATAATGAAGGA
AAGGTTTCCAGTACCTCGTCTTGTCATTTGTGATCAACATGGCTCACAGGCCCGCTTTCT
TCTGGCAAAACTGAATCCTTCTGCAACTTATAACTCTGATGCTCAAATTCCAGGAGGGGA
CATCATATTTACTGATGATGTTAGCTTTGAGGTCTTTTTGGATCACCTTCAGAGATTAGC
AGTTCAATGAATCCTGCATAGCTTTTGGCAGTTTGTATAGTTTTGTTGCTGGAAATTTTT
TGTACAGTTAGTGCATGACTTTTCTAAAAGCCTTTATTTTTTTTTTTTTATTTACATTTA
TGGAAATTACGTTCTTTTTTATTTTCTTCTTAGTACGTTAACCAATGACGTTTCAAGAGA
TGCTGGTGTTGAAAAGCTGTAGTTTCACTCATTGTTGGTAATTTTATTTGAATGCTCAGA
GAATATCAGTCTGATTAATTAGAGCAATTTGAGTGTTGGGGCTCCCTCGCTGTGGCTACT
ACATGGTAAATGGTTATGTCCGTCGCT