Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs1g02590.1
CDS Infomation

gene=Cs1g02590
Sequence

ATGGCAAGCCCTCTCACCGTTGCGAGTGGGAGTAGGTACAATGACATTAATACTTTCCAG
CAATTATCTCTTCTTCATCAGAGTCCGAGACTAGAATCATCAAAATCTGTTGGACAGCTG
AAACAATTTCATGCATTCATCATCAAAACAGGGTCTCCCCAACACCAAACTCAAATATTG
TATGATAAAATCATCTCGCTCTCGCGAGGCAATGAAATTGAAAACCTCAGCTTGCAAAAT
CCACAAGTTTACTTGTATAATTTCATCATCCAATGTCTTTCGAATGCCAACCCCTTGGAA
GCAATTGCTCTATATAGAGAGATGCTGATAAAAGGCCTTCTTCCCAACACTTACACCCTA
CCTTATGTTCTTAAGGCTTGTTGGCAGTCTCAGTCGCTCAGAGTAGGCCAGCAGGTTCAC
GCCTATTCCATGAAGACGGCTTTGCTATCTAATGTGTATGTTTTCAACACTTTGATGAGA
CTATATGCTGTTTGTGGGCTCATCAAAGCTGTTCACAAGTTGTTCCACTTCCGTCAACAC
CCTCAAGCTCAACGGGATTTGGTCTCCTGGACCACCCTAATTCAAGCTTACGTTAAGATG
GACTATCCTACCGAGGCCATTCTTTCTTTCTTCGACATGTGCCAAGCCAATCTAAGACCC
GATGGGATGATCCTCGTAATTGTGCTCTCTGCTTGCTCCAAATTGGGAGATTTGAGTTTG
GGTATTAAGATTCATAGGTATATCACTGATAATCATTTCAATCTCAGTCCAGATGTCTTC
ATCCACAATGCATTGATCGATATGTACTTGAAATGTGGTAACATACCTTCTGCTCGTAAG
GTATTTGATGAGATGCCTGTTAAAAATGTGGTTTCTTGGAACTCCATGATAGCGGGCCTG
ACTCATCGGGGCCAATTCAAGGAAGCATTGGACATATTCCGGAGAATGCAAGGTTTAGGT
CTTAAGCCCGATGACTTTACATTAGTCTGTGTTCTGAATTCTTGTGCTAATATAGGGTGG
CTTGAGTTGGGCAAGTGGGTTCATACATACTTGGATAAAAATCATATCAACACTGATGGT
TTTATAGGAAATGCACTTGTCGATATGTATGCTAAATGTGGAAGGATAGATCAGGCCTTT
GGGGTGTTTCGAAGTATGAAATGCAGAGATGTCTATTCATATACTGCCATGATCGTTGGC
TTAGCTATTCATGGGAAAGCTTGGAAAGCTTTGGATATATTCTCTGAGATGTCTCAAGTC
GGAATAGAACCAGATGAAGTAACATTTGTCGGTGTCCTCTCTGCTTGTAGTCATGCAGGG
TTAGTAGAGGAAGGCTGTAAACATTTTTTGGACATGTCAAGGGTCTACAACCTACAACCT
CAAACTGAGCACTATGGTTGTATGGTTGACCTCTTTGGTCGTGCTGGACTAATAAGGGAG
GCACTTGATCTCATAAAAAGTATGCCACTTGTGCCTGATGCCTTTGTTTGGGGGGCATTG
CTGGGAGCATGTAAAATTCATGCAAAAGTTGAGCTTGCAGAAATTGTTATGGAAAATTTG
GTGAGGTTTGAACCTGAGGGAGATGGTGCATATATACTCATGACCAACATTTATTCCTCT
AAAAACAGATGGAAGGAAGCATTGAAGTTGAGAAAGAAAATGAAAGAAAGGAAGGTGAAG
AAGACTCCTGGTTGTAGTTTAGTCGAAGTTTATGGTGAGTTTTATGAATTCAGAAAGGGA
GACAAATCACACCCAAAAACTTTAGAGATATACAAGCTGCTGGATGAAATAATGCATCAG
TCAAAGAATCATGGATACATTCTATAA

Peptide Sequence

PEP ID

Cs1g02590.1
PEP Infomation
Sequence

MASPLTVASGSRYNDINTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQTQIL
YDKIISLSRGNEIENLSLQNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYTL
PYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQH
PQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSL
GIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGL
THRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDG
FIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQV
GIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIRE
ALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSS
KNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQ
SKNHGYIL*

Transcript Sequence

Transcript ID

Cs1g02590.1
Transcript Infomation

gene=Cs1g02590 CDS=1000-2826
Sequence

GGACCACCAACAAAAGCCAAGATTCTAGCACCAGAACCAGGAACGCAAGCACCTAATAAA
CTGGCAGCAATGCTTAAGGCGGTGCCAGTGCATCTGGTAGAGCGCTGATCAGGTGGAACA
GGCCAAGGATCTTTCTGAAGCTCCTCAAGGACAGAATTGAGAGTGAATTCACAATCAAAG
GCAGGCACAAGGAAGCGTGCAATGGTATCAGAAGACAGGCCATCTCTAACACCAGCAATG
ACACCCGTAGAGGGCTTGGGCTTCTTGATAAAGAAATTCAACTGCTCGAGAAGCTGGTCC
TTTGAAACGTCCTTAGAACCCTTGAAGACATAGGTCTTTGGGATGATCTGGCCAAACCCT
CCTAATTCATGAACTTGAACTAGAGTACCAAAAGTGATAAGACCGACGAGAGAATTGTCA
GGCAAAAGATCGATGGCCTGAGAAAGAGCGGACTTAAGAAAGGACATCTCCTCTTCGATG
ATGCAAGTGTCAACAACAAACATGAAAACCGGAGGGACTGAAGATTTCTCACCGGGACCG
GGAGGCTCGTACTCGATGGTAGTGTACTGAGGGAAGAGCTCAGCTGGAAGATTATCATCG
GTGATGGAGGCGTAGTGAGGGGGGAAGTGATTACGTTGGAAACAGAAGGGACAGATCCAG
ATCTTGGCGGCAAAATCAACTATGGAGAATGGATTGAGGATTGAGCGGCATGTTCGACAC
CGAAGGGGAGCATATGGCAGAATAGGCATGCTATTGTTGTTAACAGGGAATGCCTTGATT
GGAGTGTAGATGGCTGAGACTGGCACCACGCAGTTGCTTGCTTCTTGCTTCGTCCCTGGA
ATCACGTTCCACGGCATCCTCACCCCGTCTTGCGCCTCTAGGTCCATGAATTCCGTCATT
TTTATTCTTCCTCAATTGAATTCAGCACGTCTGGATGTTGTTTGCGATTGCGACCCAGCG
AAGAAGAAGATCTTATGAATTTTTAGAAAGGAGGAGAAAATGGCAAGCCCTCTCACCGTT
GCGAGTGGGAGTAGGTACAATGACATTAATACTTTCCAGCAATTATCTCTTCTTCATCAG
AGTCCGAGACTAGAATCATCAAAATCTGTTGGACAGCTGAAACAATTTCATGCATTCATC
ATCAAAACAGGGTCTCCCCAACACCAAACTCAAATATTGTATGATAAAATCATCTCGCTC
TCGCGAGGCAATGAAATTGAAAACCTCAGCTTGCAAAATCCACAAGTTTACTTGTATAAT
TTCATCATCCAATGTCTTTCGAATGCCAACCCCTTGGAAGCAATTGCTCTATATAGAGAG
ATGCTGATAAAAGGCCTTCTTCCCAACACTTACACCCTACCTTATGTTCTTAAGGCTTGT
TGGCAGTCTCAGTCGCTCAGAGTAGGCCAGCAGGTTCACGCCTATTCCATGAAGACGGCT
TTGCTATCTAATGTGTATGTTTTCAACACTTTGATGAGACTATATGCTGTTTGTGGGCTC
ATCAAAGCTGTTCACAAGTTGTTCCACTTCCGTCAACACCCTCAAGCTCAACGGGATTTG
GTCTCCTGGACCACCCTAATTCAAGCTTACGTTAAGATGGACTATCCTACCGAGGCCATT
CTTTCTTTCTTCGACATGTGCCAAGCCAATCTAAGACCCGATGGGATGATCCTCGTAATT
GTGCTCTCTGCTTGCTCCAAATTGGGAGATTTGAGTTTGGGTATTAAGATTCATAGGTAT
ATCACTGATAATCATTTCAATCTCAGTCCAGATGTCTTCATCCACAATGCATTGATCGAT
ATGTACTTGAAATGTGGTAACATACCTTCTGCTCGTAAGGTATTTGATGAGATGCCTGTT
AAAAATGTGGTTTCTTGGAACTCCATGATAGCGGGCCTGACTCATCGGGGCCAATTCAAG
GAAGCATTGGACATATTCCGGAGAATGCAAGGTTTAGGTCTTAAGCCCGATGACTTTACA
TTAGTCTGTGTTCTGAATTCTTGTGCTAATATAGGGTGGCTTGAGTTGGGCAAGTGGGTT
CATACATACTTGGATAAAAATCATATCAACACTGATGGTTTTATAGGAAATGCACTTGTC
GATATGTATGCTAAATGTGGAAGGATAGATCAGGCCTTTGGGGTGTTTCGAAGTATGAAA
TGCAGAGATGTCTATTCATATACTGCCATGATCGTTGGCTTAGCTATTCATGGGAAAGCT
TGGAAAGCTTTGGATATATTCTCTGAGATGTCTCAAGTCGGAATAGAACCAGATGAAGTA
ACATTTGTCGGTGTCCTCTCTGCTTGTAGTCATGCAGGGTTAGTAGAGGAAGGCTGTAAA
CATTTTTTGGACATGTCAAGGGTCTACAACCTACAACCTCAAACTGAGCACTATGGTTGT
ATGGTTGACCTCTTTGGTCGTGCTGGACTAATAAGGGAGGCACTTGATCTCATAAAAAGT
ATGCCACTTGTGCCTGATGCCTTTGTTTGGGGGGCATTGCTGGGAGCATGTAAAATTCAT
GCAAAAGTTGAGCTTGCAGAAATTGTTATGGAAAATTTGGTGAGGTTTGAACCTGAGGGA
GATGGTGCATATATACTCATGACCAACATTTATTCCTCTAAAAACAGATGGAAGGAAGCA
TTGAAGTTGAGAAAGAAAATGAAAGAAAGGAAGGTGAAGAAGACTCCTGGTTGTAGTTTA
GTCGAAGTTTATGGTGAGTTTTATGAATTCAGAAAGGGAGACAAATCACACCCAAAAACT
TTAGAGATATACAAGCTGCTGGATGAAATAATGCATCAGTCAAAGAATCATGGATACATT
CTATAAATGGAGATCAAGAAATGTTTTCAATTTTGCTCTGTTGATCTCCATTCACTGGGT
TTGATATCAAGAACTTTGGGGAACTTCAGTGTGTTTTGAACCAAGTGAGAGAATTTTAGT
CAATCACATATCTTGTTCTTGTCAATACAAAGTTTTCAATTAGTCGTCAATGAATCCACT
TTGAAGTGTTATCACAAGTGCATCTCTCATAAGTGTTGTTTTACTGGTGATACTTTCTAC
ATATGTTCCATTGAAATGCTTGTAATAGTGAATTTCTGTAAATGAAAGTCTTTGATTTTC
ATGCTAGAATTACTGCAGCTGTTACCGGGAAACTGAAATGAAAAGCAAGCTTTCAAGATA
ATTTTTTATGTACTTAGTTTGTGTTATATAATGACAACTAGTCTTC