Schrenkiella parvulaSequence Name：Sparvula_genome_v2.0
| Assembly Name | Sparvula_genome_v2.0 | Biological Sample | NA |
| Number of Sequences | 928 | Number of Chromosomes | 2n = 2x = 14 |
| Total Length (bp) | 120,016,289 | N50 Length (bp) | 6,763,654 |
| Number of Genes | 26,847 | Number of Genes Source File | Sparvula_574_v2.2.protein.fa |
| Number of Genes Annotated by Hayai-annotation | 26,847 | Hayai-Annotation Version | zen_v2.0 |
| Sequencing Method | Illumina, 454 | Read Depth | 6x |
| Assembly Method | Newbler v. 2.5, ABySS v. 1.2.1, minimus2 | Estimated Genome Size (Mb) | 140 |
| Sequencing Method Comments | NA | Comments | The seeds were derived from a single plant propagated from single seeds over eight successive generations. The original accession was collected from a salt lake in Tuz Golu, central Turkey, at an elevation of 905 m above sea level.This Version has been created by further removing redundant contig and used as the reference S. parvula genome in multiple comparative genomic studies since 2013 (Haudry et al., 2013; Oh et al., 2014; Oh & Dassanayake, 2019). Synonym: Thellungiella parvula, Eutrema parvulum |
| Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
| Corresponding author | Maheshi Dassanayake (University of Illinois at Urbana-Champaign), Dong-Ha Oh (ditto), Dae-Jin Yun (Gyeongsang National University) | Data Source | Dassanayake Lab Comparative Functional Evolutionary Genomics |
| DOI/PMID | 10.1038/ng.889 | Data Source URL | https://www.lsugenomics.org/resources |
| BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
| BUSCO Genome | C:98.3%[S:97.3%,D:1.0%],F:0.7%,M:1.0%,n:1614 | BUSCO Gene (pep/cds) | C:96.1%[S:93.6%,D:2.5%],F:2.0%,M:1.9%,n:1614 |
