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アセンブル , シーケンス , Assemble , Sequence , Capsicum chinense , Bonnet pepper , トウガラシ (chinense種)

Capsicum chinense

Genome Assembly ID:t80379.G001

Sequence Name:ASM227189v2

Details of the Assembled Genome Sequences

Assembly Name ASM227189v2 Biological Sample isolate PI159236
Number of Sequences 87,978 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 3,070,910,353 N50 Length (bp) 234,238,532
Number of Genes 34,974 Number of Genes Source File GCA_002271895.2_ASM227189v2_protein.faa
Number of Genes Annotated by Hayai-annotation 34,974 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 132.2x
Assembly Method SOAPdenovo v. 2.04-r240; SSPACE v. 2.0; Platanus v. 1.2.1 Estimated Genome Size (Mb) 3,200
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Doil Choi (Seoul National University) Data Source NCBI
DOI/PMID 10.1186/s13059-017-1341-9 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.9%[S:95.9%,D:2.0%],F:1.3%,M:0.8%,n:1614 BUSCO Gene (pep/cds) C:80.0%[S:78.3%,D:1.7%],F:8.6%,M:11.4%,n:1614

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