Sequence Name:FtChromosomeV2
Assembly Name | FtChromosomeV2 | Biological Sample | cv. Pinku1 |
Number of Sequences | 8 | Number of Chromosomes | 2n = 2x = 16 |
Total Length (bp) | 451,328,869 | N50 Length (bp) | 56,655,744 |
Number of Genes | 34,544 | Number of Genes Source File | FtChromosomeV2.IGDBv2.Coreset.pros.fasta |
Number of Genes Annotated by Hayai-annotation | 34,544 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBio | Read Depth | 200x |
Assembly Method | Celera Assembler v. 8.3, MaSuRCA v. 3.1 | Estimated Genome Size (Mb) | 490 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Jun Wang (South China Agricultural University), Lin Cui (Shanxi Academy of Agricultural Sciences), Huimin Liu (Ministry of Agriculture), Chengzhi Liang (Chinese Academy of Sciences), Zhijun Qiao (Shanxi Academy of Agricultural Sciences) | Data Source | MBK BASE: Molecular Breeding Knowledgebase |
DOI/PMID | 10.1016/j.molp.2017.08.013 | Data Source URL | http://www.mbkbase.org/Pinku1 |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:95.1%[S:91.0%,D:4.1%],F:1.7%,M:3.2%,n:1614 | BUSCO Gene (pep/cds) | C:89.5%[S:80.4%,D:9.1%],F:4.2%,M:6.3%,n:1614 |