Plant GARDEN How To ▶︎



アセンブル , シーケンス , Assemble , Sequence , Fagopyrum tataricum , Tartary buckwheat, Kangra buckwheat , ダッタンソバ

Fagopyrum tataricum

Genome Assembly ID:t62330.G001

Sequence Name:FtChromosomeV2

Details of the Assembled Genome Sequences

Assembly Name FtChromosomeV2 Biological Sample cv. Pinku1
Number of Sequences 8 Number of Chromosomes 2n = 2x = 16
Total Length (bp) 451,328,869 N50 Length (bp) 56,655,744
Number of Genes 34,544 Number of Genes Source File FtChromosomeV2.IGDBv2.Coreset.pros.fasta
Number of Genes Annotated by Hayai-annotation 34,544 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio Read Depth 200x
Assembly Method Celera Assembler v. 8.3, MaSuRCA v. 3.1 Estimated Genome Size (Mb) 490
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jun Wang (South China Agricultural University), Lin Cui (Shanxi Academy of Agricultural Sciences), Huimin Liu (Ministry of Agriculture), Chengzhi Liang (Chinese Academy of Sciences), Zhijun Qiao (Shanxi Academy of Agricultural Sciences) Data Source MBK BASE: Molecular Breeding Knowledgebase
DOI/PMID 10.1016/j.molp.2017.08.013 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:95.1%[S:91.0%,D:4.1%],F:1.7%,M:3.2%,n:1614 BUSCO Gene (pep/cds) C:89.5%[S:80.4%,D:9.1%],F:4.2%,M:6.3%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Start Position
End Position
Complementary Strand