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アセンブル , シーケンス , Assemble , Sequence , Torreya grandis , Torreya grandis , シナガヤ

Torreya grandis

Genome Assembly ID:t58047.G001

Sequence Name:Tgrandis_chr

Details of the Assembled Genome Sequences

Assembly Name Tgrandis_chr Biological Sample wild accession
Number of Sequences 12 Number of Chromosomes n = 11
Total Length (bp) 19,052,410,213 N50 Length (bp) 1,824,307,213
Number of Genes 47,089 Number of Genes Source File Tgrandis_chr.protein.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio, Hi-C Read Depth 96.5x(Illumina), 23.2x(PacBio), 106.2x(Hi-C)
Assembly Method hifiasm (version 0.8-dirty-r280) Estimated Genome Size (Mb) 20,000
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jiasheng Wu (Zhejiang A&F University) Data Source Figshare
DOI/PMID 10.1038/s41467-023-37038-2 Data Source URL https://figshare.com
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:90.0%[S:81.3%,D:8.7%],F:4.0%,M:5.9%,n:1614 BUSCO Gene (pep/cds) C:66.8%[S:59.9%,D:6.9%],F:18.0%,M:15.2%,n:1614

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Gene data has not been registered.

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