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アセンブル , シーケンス , Assemble , Sequence , Trifolium pratense var. Milvus , Red clover (var. Milvus) , アカクローバー, ムラサキツメクサ (Milvus変種)

Trifolium pratense

Genome Assembly ID:t57577.G001

Sequence Name:Trpr

Details of the Assembled Genome Sequences

Assembly Name Trpr Biological Sample var. Milvus, genotype Milvus B
Number of Sequences 8,595 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 304,842,038 N50 Length (bp) 22,682,783
Number of Genes 41,270 Number of Genes Source File Trifolium_pratense.Trpr.pep.all.fa
Number of Genes Annotated by Hayai-annotation 41,270 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina HiSeq2000, Illumina MiSeq, Read Depth 100x
Assembly Method Platanus v1.2.1 Estimated Genome Size (Mb) 420
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jose J. De Vega (The Genome Analysis Centre), Leif Skot (Aberystwyth University) Data Source Ensembl
DOI/PMID 10.1038/srep17394 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:91.0%[S:88.6%,D:2.4%],F:6.1%,M:2.9%,n:1614 BUSCO Gene (pep/cds) C:89.1%[S:82.3%,D:6.8%],F:7.0%,M:3.9%,n:1614

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