Sequence Name:Trpr
Assembly Name | Trpr | Biological Sample | var. Milvus, genotype Milvus B |
Number of Sequences | 8,595 | Number of Chromosomes | 2n = 2x = 14 |
Total Length (bp) | 304,842,038 | N50 Length (bp) | 22,682,783 |
Number of Genes | 41,270 | Number of Genes Source File | Trifolium_pratense.Trpr.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 41,270 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina HiSeq2000, Illumina MiSeq, | Read Depth | 100x |
Assembly Method | Platanus v1.2.1 | Estimated Genome Size (Mb) | 420 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Jose J. De Vega (The Genome Analysis Centre), Leif Skot (Aberystwyth University) | Data Source | Ensembl |
DOI/PMID | 10.1038/srep17394 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:91.0%[S:88.6%,D:2.4%],F:6.1%,M:2.9%,n:1614 | BUSCO Gene (pep/cds) | C:89.1%[S:82.3%,D:6.8%],F:7.0%,M:3.9%,n:1614 |