Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Citrus unshiu , Satsuma orange, Satsuma mandarin , ウンシュウミカン

Citrus unshiu

Genome Assembly ID:t55188.G002

Sequence Name:CUNuph_r1.0

Details of the Assembled Genome Sequences

Assembly Name CUNuph_r1.0 Biological Sample Miyagawa wase
Number of Sequences 243 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 388,890,128 N50 Length (bp) 39,642,155
Number of Genes 0 Number of Genes Source File NA
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Hifi Read Depth 42.4X
Assembly Method TioCanu, Hifiasm Estimated Genome Size (Mb) 364
Sequencing Method Comments NA Comments Unphased genome
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Res Inst) Data Source Plant GARDEN
DOI/PMID 10.1101/2023.06.02.543356 Data Source URL https://plantgarden.jp/
BUSCO Version 3.0.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:97.1%,D:1.1%],F:0.4%,M:1.4%,n:1375 BUSCO Gene (pep/cds) NA

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format