Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Elaeis guineensis , African oil palm , アブラヤシ

Elaeis guineensis

Genome Assembly ID:t51953.G001

Sequence Name:EG5

Details of the Assembled Genome Sequences

Assembly Name EG5 Biological Sample AVROS pisifera
Number of Sequences 40,061 Number of Chromosomes 2n = 2x = 32
Total Length (bp) 1,535,178,229 N50 Length (bp) 1,268,079
Number of Genes 43,551 Number of Genes Source File GCF_000442705.1_EG5_protein.faa
Number of Genes Annotated by Hayai-annotation 43,551 Hayai-Annotation Version zen_v2.0
Sequencing Method 454 Read Depth 26x
Assembly Method Newbler v. 2.6 Estimated Genome Size (Mb) 1,800
Sequencing Method Comments NA Comments 'AVROS pisifera' fruit-form
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Robert A. Martienssen (Cold Spring Harbor Laboratory), Rajinder Singh (Malaysian Palm Oil Board) Data Source NCBI
DOI/PMID 10.1038/nature12309 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.2%[S:91.2%,D:6.0%],F:1.7%,M:1.1%,n:1614 BUSCO Gene (pep/cds) C:98.8%[S:52.9%,D:45.9%],F:0.4%,M:0.8%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format