Sequence Name:MPIPZ.v5
Assembly Name | MPIPZ.v5 | Biological Sample | cv. Pajares |
Number of Sequences | 926 | Number of Chromosomes | 2n = 2x = 16 |
Total Length (bp) | 336,719,365 | N50 Length (bp) | 36,598,175 |
Number of Genes | 39,815 | Number of Genes Source File | A_alpina_V4.protein.fasta |
Number of Genes Annotated by Hayai-annotation | 39,815 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, 454, Sanger | Read Depth | 86x |
Assembly Method | Newbler v. 2.9, SSPACE v. 1.2, BAMBUS v. 2.33 | Estimated Genome Size (Mb) | 375 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Korbinian Schneeberger (schneeberger@mpipz.mpg.de), George Coupland (coupland@mpipz.mpg.de) | Data Source | Genomic resources for Arabis alpina |
DOI/PMID | 10.1038/nplants.2014.23 | Data Source URL | http://www.arabis-alpina.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:99.3%[S:96.3%,D:3.0%],F:0.4%,M:0.3%,n:1614 | BUSCO Gene (pep/cds) | C:96.7%[S:87.9%,D:8.8%],F:1.8%,M:1.5%,n:1614 |