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アセンブル , シーケンス , Assemble , Sequence , Erianthus arundinaceus , Erianthus, Sweetcane , エリアンサス

Erianthus arundinaceus

Genome Assembly ID:t50346.G001

Sequence Name:EARuph_r1.0

Details of the Assembled Genome Sequences

Assembly Name EARuph_r1.0 Biological Sample JW4
Number of Sequences 10 Number of Chromosomes 2n = 6x = 60
Total Length (bp) 1,296,350,803 N50 Length (bp) 130,135,155
Number of Genes 59,131 Number of Genes Source File EARuph_r1.0.pmol_pep_HC.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina PE, MP, 10XGenomics, PacBio CCS Read Depth 293X
Assembly Method DenovoMAGIC 3.0 Estimated Genome Size (Mb) 6,000
Sequencing Method Comments Comments Unphased genome, Synonym: Tripidium arundinaceum
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Res Inst, University of Tokyo) Data Source Plant GARDEN
DOI/PMID in preparation Data Source URL https://plantgarden.jp/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:96.8%[S:80.3%,D:16.5%],F:0.6%,M:2.6%,n:1614 BUSCO Gene (pep/cds) C:93.5%[S:77.9%,D:15.6%],F:1.1%,M:5.4%,n:1614

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Gene data has not been registered.

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