Sequence Name:NIATTr2
Assembly Name | NIATTr2 | Biological Sample | ecotype Utah, UT |
Number of Sequences | 37,194 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 2,365,682,703 | N50 Length (bp) | 524,499 |
Number of Genes | 33,320 | Number of Genes Source File | Nicotiana_attenuata.NIATTr2.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 33,320 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBio, 454 | Read Depth | 30x |
Assembly Method | Celera Assembler v. 7 | Estimated Genome Size (Mb) | 2,500 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Shuqing Xua (Max Planck Institute for Chemical Ecology), Ian T. Baldwin (ditto), Emmanuel Gaquerelb (University of Heidelberg) | Data Source | Ensembl |
DOI/PMID | 10.1073/pnas.1700073114 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:96.2%,D:2.4%],F:0.9%,M:0.5%,n:1614 | BUSCO Gene (pep/cds) | C:92.8%[S:90.4%,D:2.4%],F:3.4%,M:3.8%,n:1614 |