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アセンブル , シーケンス , Assemble , Sequence , Nicotiana attenuata , Wild tobacco (attenuata), Coyote tobacco , タバコ野生種 (attenuata種), コヨーテタバコ

Nicotiana attenuata

Genome Assembly ID:t49451.G001

Sequence Name:NIATTr2

Details of the Assembled Genome Sequences

Assembly Name NIATTr2 Biological Sample ecotype Utah, UT
Number of Sequences 37,194 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 2,365,682,703 N50 Length (bp) 524,499
Number of Genes 33,320 Number of Genes Source File Nicotiana_attenuata.NIATTr2.pep.all.fa
Number of Genes Annotated by Hayai-annotation 33,320 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio, 454 Read Depth 30x
Assembly Method Celera Assembler v. 7 Estimated Genome Size (Mb) 2,500
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Shuqing Xua (Max Planck Institute for Chemical Ecology), Ian T. Baldwin (ditto), Emmanuel Gaquerelb (University of Heidelberg) Data Source Ensembl
DOI/PMID 10.1073/pnas.1700073114 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.6%[S:96.2%,D:2.4%],F:0.9%,M:0.5%,n:1614 BUSCO Gene (pep/cds) C:92.8%[S:90.4%,D:2.4%],F:3.4%,M:3.8%,n:1614

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